FFCP PHASE1:Hg19::chr17:4847640..4847689,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C413|description=CAGE_peak_at_chr17:4847640..4847689,+|id=chr17:4847640..4847689,+|ontology_enrichment_celltype=CL:0000037!2.95e-56!172;CL:0000566!2.95e-56!172;CL:0002032!2.04e-54!165;CL:0000837!2.04e-54!165;CL:0000988!6.26e-53!182;CL:0000738!1.30e-52!140;CL:0002031!1.02e-44!124;CL:0002087!7.08e-43!119;CL:0000763!1.82e-31!112;CL:0000049!1.82e-31!112;CL:0002057!2.25e-27!42;CL:0000766!5.01e-27!76;CL:0000860!7.92e-25!45;CL:0000839!3.54e-22!70;CL:0000557!5.80e-22!71;CL:0002009!3.49e-21!65;CL:0000838!2.27e-20!52;CL:0000542!2.62e-20!53;CL:0000051!2.62e-20!53;CL:0002194!3.87e-20!63;CL:0000576!3.87e-20!63;CL:0000040!3.87e-20!63;CL:0000559!3.87e-20!63;CL:0000791!3.98e-12!18;CL:0000789!3.98e-12!18;CL:0002420!3.98e-12!18;CL:0002419!3.98e-12!18;CL:0000790!3.98e-12!18;CL:0000084!8.76e-12!25;CL:0000827!8.76e-12!25;CL:0000134!5.59e-10!358;CL:0002320!6.76e-09!365;CL:0000945!2.08e-08!24;CL:0000826!2.08e-08!24;CL:0000625!2.24e-08!11;CL:0000094!2.49e-07!8;CL:0000219!3.06e-07!390|ontology_enrichment_celltype_v019=CL:0000860;3.15e-29;33!CL:0002057;3.15e-29;33!CL:0000473;3.42e-20;39!CL:0000234;3.42e-20;39!CL:0000576;1.28e-19;48!CL:0002087;2.69e-17;104!CL:0000791;9.55e-17;18!CL:0000789;9.55e-17;18!CL:0002419;9.55e-17;18!CL:0000766;1.42e-15;69!CL:0000084;9.71e-15;25!CL:0000542;3.56e-13;53!CL:0000738;3.02e-12;136!CL:0000625;2.26e-11;11!CL:0000763;4.06e-11;100!CL:0000988;2.83e-10;177!CL:0000094;8.53e-10;8!CL:0000945;8.37e-09;24!CL:0000081;6.56e-08;11!CL:0000219;5.27e-07;193|ontology_enrichment_celltype_v019_2=CL:0000738,1.45e-59,136;CL:0000037,1.59e-58,168;CL:0002032,1.66e-58,161;CL:0000837,1.66e-58,161;CL:0000988,4.57e-57,177;CL:0002031,3.29e-51,120;CL:0002087,5.03e-50,115;CL:0000860,1.10e-38,42;CL:0002057,1.10e-38,42;CL:0000473,4.00e-33,48;CL:0000234,4.00e-33,48;CL:0000763,2.31e-32,108;CL:0000049,2.31e-32,108;CL:0000766,9.47e-31,72;CL:0002009,1.16e-24,61;CL:0000839,3.18e-24,66;CL:0000557,3.20e-24,67;CL:0000838,3.97e-24,52;CL:0000542,2.17e-23,53;CL:0000051,2.17e-23,53;CL:0002194,3.24e-23,59;CL:0000576,3.24e-23,59;CL:0000040,3.24e-23,59;CL:0000559,3.24e-23,59;CL:0000791,9.92e-17,18;CL:0000789,9.92e-17,18;CL:0002420,9.92e-17,18;CL:0002419,9.92e-17,18;CL:0000790,9.92e-17,18;CL:0000084,8.64e-15,25;CL:0000827,8.64e-15,25;CL:0000134,3.50e-14,354;CL:0002320,3.06e-13,361;CL:0000625,2.39e-11,11;CL:0000219,4.95e-10,386;CL:0000094,7.50e-10,8;CL:0000945,9.59e-09,24;CL:0000826,9.59e-09,24;CL:0000081,5.08e-08,11;CL:0002393,6.91e-08,9;CL:0002397,6.91e-08,9;CL:0000723,4.10e-07,433;CL:0000034,9.37e-07,441|ontology_enrichment_development_v019=CL:0002057;1.11e-27;42!CL:0000790;9.55e-17;18!CL:0000051;3.56e-13;53!CL:0000049;5.51e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.09e-30!102;UBERON:0003061!4.09e-30!102;UBERON:0002193!5.84e-26!112;UBERON:0002371!3.76e-18!80;UBERON:0001474!3.73e-15!86;UBERON:0002405!3.10e-14!115;UBERON:0004765!8.68e-12!101;UBERON:0001434!8.68e-12!101;UBERON:0000178!2.13e-10!15;UBERON:0000179!2.13e-10!15;UBERON:0000463!2.13e-10!15;UBERON:0002384!3.68e-08!375|ontology_enrichment_uberon_v019=UBERON:0000178;3.95e-14;15!UBERON:0000179;3.95e-14;15!UBERON:0000463;3.95e-14;15!UBERON:0002390;1.19e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-36,98;UBERON:0003061,1.28e-36,98;UBERON:0002193,5.49e-33,108;UBERON:0002405,6.19e-22,93;UBERON:0002371,2.96e-20,76;UBERON:0001474,1.38e-17,82;UBERON:0004765,1.24e-14,90;UBERON:0000178,3.02e-14,15;UBERON:0000179,3.02e-14,15;UBERON:0000463,3.02e-14,15;UBERON:0002384,5.61e-12,371;UBERON:0001434,1.10e-11,100;UBERON:0003081,1.40e-08,203|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2261449196722,16.666419658339,14.2466514177759,12.194292582316,8.06041736004147,2.94150634300544,1.83884244895785,1.204823675113,0.739508020333575,0.619737604642413,0.426507697462265,0.587200878669695,2.76997704265939,2.60707781711184,1.73608696572681,0.223915474239924,0.32389366601898,0,6.54292074508041,4.91238726795452,6.79235371325885,19.0591810262661,16.446715520873,20.7503268499719,8.63077176966451,11.0149103807513,10.8781825748749,12.0660988257816,14.2006630388442,24.3767675869815,14.8711448238658,17.73889975376,19.7756666311674,21.4258724659632,18.2929545433373,19.1801137739712,3.62836430205388,3.98927315243264,4.68847225585964,37.1467825444588,44.2560475259089,33.0095791967655,7.5374599577023,9.90817544998383,12.8141418376019,25.4267791106015,40.5105399586321,38.291948880347,4.22510572623884,3.4016687994407,2.72556239160889,1.79725809834392,2.70318407114711,2.25015821375912,15.1056754182862,13.1285006951399,11.8731699947012,3.51992488922645,2.73069305631066,6.22656477704488,2.13365111283254,4.00395987036012,2.2990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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_at_chr17:4847640..4847689,+ | |||
|id=chr17:4847640..4847689,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.95e-56!172;CL:0000566!2.95e-56!172;CL:0002032!2.04e-54!165;CL:0000837!2.04e-54!165;CL:0000988!6.26e-53!182;CL:0000738!1.30e-52!140;CL:0002031!1.02e-44!124;CL:0002087!7.08e-43!119;CL:0000763!1.82e-31!112;CL:0000049!1.82e-31!112;CL:0002057!2.25e-27!42;CL:0000766!5.01e-27!76;CL:0000860!7.92e-25!45;CL:0000839!3.54e-22!70;CL:0000557!5.80e-22!71;CL:0002009!3.49e-21!65;CL:0000838!2.27e-20!52;CL:0000542!2.62e-20!53;CL:0000051!2.62e-20!53;CL:0002194!3.87e-20!63;CL:0000576!3.87e-20!63;CL:0000040!3.87e-20!63;CL:0000559!3.87e-20!63;CL:0000791!3.98e-12!18;CL:0000789!3.98e-12!18;CL:0002420!3.98e-12!18;CL:0002419!3.98e-12!18;CL:0000790!3.98e-12!18;CL:0000084!8.76e-12!25;CL:0000827!8.76e-12!25;CL:0000134!5.59e-10!358;CL:0002320!6.76e-09!365;CL:0000945!2.08e-08!24;CL:0000826!2.08e-08!24;CL:0000625!2.24e-08!11;CL:0000094!2.49e-07!8;CL:0000219!3.06e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.15e-29;33!CL:0002057;3.15e-29;33!CL:0000473;3.42e-20;39!CL:0000234;3.42e-20;39!CL:0000576;1.28e-19;48!CL:0002087;2.69e-17;104!CL:0000791;9.55e-17;18!CL:0000789;9.55e-17;18!CL:0002419;9.55e-17;18!CL:0000766;1.42e-15;69!CL:0000084;9.71e-15;25!CL:0000542;3.56e-13;53!CL:0000738;3.02e-12;136!CL:0000625;2.26e-11;11!CL:0000763;4.06e-11;100!CL:0000988;2.83e-10;177!CL:0000094;8.53e-10;8!CL:0000945;8.37e-09;24!CL:0000081;6.56e-08;11!CL:0000219;5.27e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.45e-59,136;CL:0000037,1.59e-58,168;CL:0002032,1.66e-58,161;CL:0000837,1.66e-58,161;CL:0000988,4.57e-57,177;CL:0002031,3.29e-51,120;CL:0002087,5.03e-50,115;CL:0000860,1.10e-38,42;CL:0002057,1.10e-38,42;CL:0000473,4.00e-33,48;CL:0000234,4.00e-33,48;CL:0000763,2.31e-32,108;CL:0000049,2.31e-32,108;CL:0000766,9.47e-31,72;CL:0002009,1.16e-24,61;CL:0000839,3.18e-24,66;CL:0000557,3.20e-24,67;CL:0000838,3.97e-24,52;CL:0000542,2.17e-23,53;CL:0000051,2.17e-23,53;CL:0002194,3.24e-23,59;CL:0000576,3.24e-23,59;CL:0000040,3.24e-23,59;CL:0000559,3.24e-23,59;CL:0000791,9.92e-17,18;CL:0000789,9.92e-17,18;CL:0002420,9.92e-17,18;CL:0002419,9.92e-17,18;CL:0000790,9.92e-17,18;CL:0000084,8.64e-15,25;CL:0000827,8.64e-15,25;CL:0000134,3.50e-14,354;CL:0002320,3.06e-13,361;CL:0000625,2.39e-11,11;CL:0000219,4.95e-10,386;CL:0000094,7.50e-10,8;CL:0000945,9.59e-09,24;CL:0000826,9.59e-09,24;CL:0000081,5.08e-08,11;CL:0002393,6.91e-08,9;CL:0002397,6.91e-08,9;CL:0000723,4.10e-07,433;CL:0000034,9.37e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-27;42!CL:0000790;9.55e-17;18!CL:0000051;3.56e-13;53!CL:0000049;5.51e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.09e-30!102;UBERON:0003061!4.09e-30!102;UBERON:0002193!5.84e-26!112;UBERON:0002371!3.76e-18!80;UBERON:0001474!3.73e-15!86;UBERON:0002405!3.10e-14!115;UBERON:0004765!8.68e-12!101;UBERON:0001434!8.68e-12!101;UBERON:0000178!2.13e-10!15;UBERON:0000179!2.13e-10!15;UBERON:0000463!2.13e-10!15;UBERON:0002384!3.68e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.95e-14;15!UBERON:0000179;3.95e-14;15!UBERON:0000463;3.95e-14;15!UBERON:0002390;1.19e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-36,98;UBERON:0003061,1.28e-36,98;UBERON:0002193,5.49e-33,108;UBERON:0002405,6.19e-22,93;UBERON:0002371,2.96e-20,76;UBERON:0001474,1.38e-17,82;UBERON:0004765,1.24e-14,90;UBERON:0000178,3.02e-14,15;UBERON:0000179,3.02e-14,15;UBERON:0000463,3.02e-14,15;UBERON:0002384,5.61e-12,371;UBERON:0001434,1.10e-11,100;UBERON:0003081,1.40e-08,203 | |||
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| |||
|short_description=p@chr17:4847640..4847689,+ | |||
}} |
Revision as of 14:30, 11 September 2013
Short description: | p@chr17:4847640..4847689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:4847640..4847689, + |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-36 | 98 |
blood island | 1.28e-36 | 98 |
hemolymphoid system | 5.49e-33 | 108 |
immune system | 6.19e-22 | 93 |
bone marrow | 2.96e-20 | 76 |
bone element | 1.38e-17 | 82 |
skeletal element | 1.24e-14 | 90 |
blood | 3.02e-14 | 15 |
haemolymphatic fluid | 3.02e-14 | 15 |
organism substance | 3.02e-14 | 15 |
connective tissue | 5.61e-12 | 371 |
skeletal system | 1.10e-11 | 100 |
lateral plate mesoderm | 1.40e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.