FFCP PHASE1:Hg19::chr17:57918463..57918513,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=406991|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=31586|TSSclassifier=W|UniProt=|association_with_transcript=-113bp_to_NR_029493_5end|description=CAGE_peak_1_at_MIR21_5end|id=chr17:57918463..57918513,+|ontology_enrichment_celltype=CL:0002194!1.39e-11!63;CL:0000576!1.39e-11!63;CL:0000040!1.39e-11!63;CL:0000559!1.39e-11!63;CL:0002009!3.36e-11!65;CL:0000557!4.79e-11!71;CL:0002057!1.29e-10!42;CL:0000839!3.72e-10!70;CL:0000860!2.54e-09!45;CL:0000766!2.81e-09!76|ontology_enrichment_celltype_v019=CL:0000860;3.49e-15;33!CL:0002057;3.49e-15;33!CL:0000473;2.07e-14;39!CL:0000234;2.07e-14;39!CL:0000576;1.74e-07;48|ontology_enrichment_celltype_v019_2=CL:0000473,6.99e-16,48;CL:0000234,6.99e-16,48;CL:0002194,1.12e-14,59;CL:0000576,1.12e-14,59;CL:0000040,1.12e-14,59;CL:0000559,1.12e-14,59;CL:0000860,1.15e-13,42;CL:0002057,1.15e-13,42;CL:0002009,1.37e-13,61;CL:0000557,1.38e-13,67;CL:0000839,1.56e-13,66;CL:0000766,3.81e-12,72|ontology_enrichment_development_v019=CL:0002057;1.59e-10;42|ontology_enrichment_disease=DOID:0050687!1.74e-08!143;DOID:14566!1.51e-07!239;DOID:162!2.69e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.57e-10!80;UBERON:0001474!2.65e-10!86;UBERON:0004765!5.61e-09!101;UBERON:0001434!5.61e-09!101;UBERON:0002204!5.50e-08!167;UBERON:0002405!1.64e-07!115;UBERON:0002390!1.79e-07!102;UBERON:0003061!1.79e-07!102;UBERON:0000926!4.65e-07!448;UBERON:0004120!4.65e-07!448;UBERON:0006603!4.65e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-12,76;UBERON:0001474,1.31e-11,82;UBERON:0004765,5.65e-10,90;UBERON:0002405,9.89e-09,93;UBERON:0002390,2.39e-08,98;UBERON:0003061,2.39e-08,98;UBERON:0001434,4.19e-08,100;UBERON:0002193,3.49e-07,108|phase1_expression=1.63510541343501,0.856402095563933,0.986680828671798,2.00146596706261,3.12872766099101,4.36169262050184,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.37129905888014,1.32558950291166,8.74022690387308,9.04041792035965,11.684961446198,6.8310591830671,0.861847406537515,0.204000691244253,1.25381888591235,1.71741592278634,3.96935832711364,1.50651167513763,0.305653622991805,0.328402357799783,0.393553906568396,0.393364276848904,0.767658796194425,0.154816123316076,0.919421224478927,0.30120591877825,0,0.154934401160603,0.995184627411951,0.293600439334847,7.20194031091441,3.20871115952227,8.02940221648652,2.23915474239924,0.647787332037959,0,2.32637182047304,1.88937971844405,1.94067248950253,7.90258725479328,6.57868620834921,8.3620720141678,21.2892370318391,14.0888388591005,13.2430048737608,21.0294865249337,11.6187243045089,10.8341189275473,4.1413314699373,3.27487380069415,4.04502272001152,26.0171308515267,8.02322567690234,26.8521592835597,7.58657990429447,7.38015533200038,7.2458207590558,9.86711411337186,9.07816359505824,3.73693349397345,29.6473425002957,25.5526630025899,13.4657083717172,5.44859552370032,2.57794345191295,11.076183560431,0.211255286311942,0,0,0.112328631146495,0.450530678524519,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0.786839080455332,0.786021525498329,2.87842098599313,1.17030546773475,0,0,0,2.22820913770347,0.294605907474837,0.221533894583621,0.541607727530031,8.19784446244321,11.1851038901495,1.80881695064044,4.14525026678773,0.579606171470105,0.296573126324121,0,1.04535523804977,1.0197840842781,0,0,0.253019692019503,0,0.651083453856419,0,0,0,1.24930726552346,0.236777252044017,0,0.403213486449465,1.06976078313403,1.01377082717959,4.87613732627923,2.01210257911091,0.12786256184353,1.80719576192283,0.50133791063589,1.01392563272577,0,0.973269740605272,3.49778823507051,5.32150553910154,4.3917392846563,0.261958150995425,0,0.370784442784429,4.21911611751088,3.65672448328461,2.79211717089617,0.476981248610684,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,1.37559020970034,0.208994966536811,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,3.24056779152704,0.17859945656816,1.34717623575702,0.225222960966644,0,0,1.28241220751285,0,0,0.436094052142534,8.94549513051573,1.01304409331664,3.04541115870403,2.0078563452417,2.12801029319014,0.560677600142307,2.1349799145941,0.24666754841716,0,0.942974704487816,1.14423332179421,0.454072282934794,1.15235184896,0,0,0,0.448346041655403,0.469737994575059,0,0.280901613404497,0.61246251376468,0.61417158655884,0.103325781175765,2.37600571456411,2.47266929278557,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0.877955241761676,3.37136575378922,1.80285670687916,0.794025282120147,2.33206526395521,0.427114777637135,0.211931901159562,2.10063767259082,0.412210116953756,3.09168648054755,0,7.42615861861571,0.292311015483596,4.03894038790583,1.19664868234989,0.323292113637624,3.19508633264953,0.705264687593482,0.847802961552438,1.54608682530637,1.36373060295417,0.286804595389004,0.3659211183887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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=406991 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31586 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-113bp_to_NR_029493_5end | |||
|description=CAGE_peak_1_at_MIR21_5end | |||
|id=chr17:57918463..57918513,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.39e-11!63;CL:0000576!1.39e-11!63;CL:0000040!1.39e-11!63;CL:0000559!1.39e-11!63;CL:0002009!3.36e-11!65;CL:0000557!4.79e-11!71;CL:0002057!1.29e-10!42;CL:0000839!3.72e-10!70;CL:0000860!2.54e-09!45;CL:0000766!2.81e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.49e-15;33!CL:0002057;3.49e-15;33!CL:0000473;2.07e-14;39!CL:0000234;2.07e-14;39!CL:0000576;1.74e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.99e-16,48;CL:0000234,6.99e-16,48;CL:0002194,1.12e-14,59;CL:0000576,1.12e-14,59;CL:0000040,1.12e-14,59;CL:0000559,1.12e-14,59;CL:0000860,1.15e-13,42;CL:0002057,1.15e-13,42;CL:0002009,1.37e-13,61;CL:0000557,1.38e-13,67;CL:0000839,1.56e-13,66;CL:0000766,3.81e-12,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-10;42 | |||
|ontology_enrichment_disease=DOID:0050687!1.74e-08!143;DOID:14566!1.51e-07!239;DOID:162!2.69e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.57e-10!80;UBERON:0001474!2.65e-10!86;UBERON:0004765!5.61e-09!101;UBERON:0001434!5.61e-09!101;UBERON:0002204!5.50e-08!167;UBERON:0002405!1.64e-07!115;UBERON:0002390!1.79e-07!102;UBERON:0003061!1.79e-07!102;UBERON:0000926!4.65e-07!448;UBERON:0004120!4.65e-07!448;UBERON:0006603!4.65e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-12,76;UBERON:0001474,1.31e-11,82;UBERON:0004765,5.65e-10,90;UBERON:0002405,9.89e-09,93;UBERON:0002390,2.39e-08,98;UBERON:0003061,2.39e-08,98;UBERON:0001434,4.19e-08,100;UBERON:0002193,3.49e-07,108 | |||
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| |||
|short_description=p1@MIR21 | |||
}} |
Revision as of 14:53, 11 September 2013
Short description: | p1@MIR21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIR21_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_NR_029493_5end |
EntrezGene: | MIR21 |
HGNC: | 31586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.99e-16 | 48 |
phagocyte | 6.99e-16 | 48 |
monopoietic cell | 1.12e-14 | 59 |
monocyte | 1.12e-14 | 59 |
monoblast | 1.12e-14 | 59 |
promonocyte | 1.12e-14 | 59 |
classical monocyte | 1.15e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-13 | 42 |
macrophage dendritic cell progenitor | 1.37e-13 | 61 |
granulocyte monocyte progenitor cell | 1.38e-13 | 67 |
myeloid lineage restricted progenitor cell | 1.56e-13 | 66 |
myeloid leukocyte | 3.81e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-12 | 76 |
bone element | 1.31e-11 | 82 |
skeletal element | 5.65e-10 | 90 |
immune system | 9.89e-09 | 93 |
hematopoietic system | 2.39e-08 | 98 |
blood island | 2.39e-08 | 98 |
skeletal system | 4.19e-08 | 100 |
hemolymphoid system | 3.49e-07 | 108 |
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