FFCP PHASE1:Hg19::chr18:2846787..2846812,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84034|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19881|TSSclassifier=S|UniProt=Q9BXX0|association_with_transcript=-215bp_to_ENST00000254528,ENST00000308080,NM_032048,uc002kln.2_5end|description=CAGE_peak_8_at_EMILIN2_5end|id=chr18:2846787..2846812,+|ontology_enrichment_celltype=CL:0002057!1.66e-12!42;CL:0002620!2.92e-11!23;CL:0000860!5.48e-11!45;CL:0000057!1.10e-10!75;CL:0000839!1.18e-09!70;CL:0000557!2.36e-09!71;CL:0002194!6.41e-09!63;CL:0000576!6.41e-09!63;CL:0000040!6.41e-09!63;CL:0000559!6.41e-09!63;CL:0002009!2.53e-08!65;CL:0000766!5.52e-08!76|ontology_enrichment_celltype_v019=CL:0000860;7.66e-23;33!CL:0002057;7.66e-23;33!CL:0000349;2.56e-22;19!CL:0000473;6.01e-16;39!CL:0000234;6.01e-16;39!CL:0002541;4.36e-12;3!CL:0002577;4.53e-12;3!CL:0000576;5.96e-12;48!CL:0002536;1.41e-08;2!CL:0002537;7.87e-08;5|ontology_enrichment_celltype_v019_2=CL:0000349,2.07e-22,19;CL:0000860,2.52e-20,42;CL:0002057,2.52e-20,42;CL:0000473,2.85e-17,48;CL:0000234,2.85e-17,48;CL:0002194,5.17e-13,59;CL:0000576,5.17e-13,59;CL:0000040,5.17e-13,59;CL:0000559,5.17e-13,59;CL:0000839,1.01e-12,66;CL:0000557,1.79e-12,67;CL:0002009,1.82e-12,61;CL:0002577,2.86e-12,3;CL:0002541,8.73e-12,3;CL:0000766,2.47e-11,72;CL:0002536,7.58e-09,2;CL:0002537,7.83e-08,5;CL:0000763,3.55e-07,108;CL:0000049,3.55e-07,108|ontology_enrichment_development_v019=CL:0002057;5.34e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.45e-07;5!DOID:450;2.45e-07;5!DOID:66;2.45e-07;5!DOID:423;2.45e-07;5!DOID:0080000;2.45e-07;5!DOID:11722;2.45e-07;5|ontology_enrichment_disease_v019_2=DOID:17,3.19e-07,5;DOID:450,3.19e-07,5;DOID:66,3.19e-07,5;DOID:423,3.19e-07,5;DOID:0080000,3.19e-07,5;DOID:11722,3.19e-07,5|ontology_enrichment_uberon=UBERON:0005631!6.77e-11!14;UBERON:0000158!6.77e-11!14;UBERON:0000062!7.53e-09!511;UBERON:0004923!1.38e-08!57;UBERON:0003124!2.17e-08!7;UBERON:0002097!1.18e-07!40;UBERON:0002199!2.36e-07!45;UBERON:0002416!2.36e-07!45;UBERON:0002371!4.84e-07!80;UBERON:0000468!5.09e-07!659;UBERON:0002204!7.59e-07!167|ontology_enrichment_uberon_v019=UBERON:0005631;1.04e-23;10!UBERON:0000158;1.04e-23;10!UBERON:0000478;2.35e-20;24!UBERON:0001987;3.23e-15;4!UBERON:0000305;6.08e-14;7!UBERON:0003124;4.36e-12;3!UBERON:0000920;4.36e-12;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.47e-37,14;UBERON:0000158,3.47e-37,14;UBERON:0003124,1.29e-25,7;UBERON:0000478,1.63e-20,24;UBERON:0001987,1.40e-15,4;UBERON:0004340,1.40e-15,4;UBERON:0000305,3.91e-14,7;UBERON:0004871,2.55e-12,8;UBERON:0000920,8.73e-12,3;UBERON:0002371,1.57e-10,76;UBERON:0003081,1.27e-09,203;UBERON:0001474,1.78e-09,82;UBERON:0004923,2.66e-09,66;UBERON:0004765,2.71e-08,90;UBERON:0002405,6.64e-08,93;UBERON:0002390,2.61e-07,98;UBERON:0003061,2.61e-07,98;UBERON:0001434,4.33e-07,100|phase1_expression=0.54503513781167,0.856402095563933,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,5.67947567538448,1.84636884759917,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0.436194716338694,0.377875943688809,0.242584061187816,1.16214518452842,0.822335776043652,0,1.1507695692886,0.512321413058201,0.47296445977717,1.03423704220986,1.29096936716765,0,0.376484679085209,1.09162460023138,0.224723484445085,1.22433556948361,1.28371610830437,0.639337125799041,1.31940520074686,0.398927315243264,0.852449501065388,4.35313857942876,2.8369261234557,1.24564449799115,1.50749199154046,1.0429658368404,1.08594422352558,1.21079900526674,1.84138817993782,1.58231193720442,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.597794722207204,0.822041490506354,0.809364721840658,0.561803226808994,0.408308342509787,0.122834317311768,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0.113432183160021,3.40840307808838,1.06778694409284,0,2.10063767259082,0.618315175430633,1.03056216018252,0.37223371266318,0.843881661206331,0.0974370051611986,2.27190396819703,0.828449087780694,0.484938170456436,2.84007674013291,0.705264687593482,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0,0,0,0,0,0.264145302039678,0.621984346622316,1.00883967391873,0.25248486685276,0,0.763976851116555,0,0,0,0.300343057843917,0,0.112131084345361,1.74384027533312,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0.977208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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19881 | |||
|TSSclassifier=S | |||
|UniProt=Q9BXX0 | |||
|association_with_transcript=-215bp_to_ENST00000254528,ENST00000308080,NM_032048,uc002kln.2_5end | |||
|description=CAGE_peak_8_at_EMILIN2_5end | |||
|id=chr18:2846787..2846812,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.66e-12!42;CL:0002620!2.92e-11!23;CL:0000860!5.48e-11!45;CL:0000057!1.10e-10!75;CL:0000839!1.18e-09!70;CL:0000557!2.36e-09!71;CL:0002194!6.41e-09!63;CL:0000576!6.41e-09!63;CL:0000040!6.41e-09!63;CL:0000559!6.41e-09!63;CL:0002009!2.53e-08!65;CL:0000766!5.52e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.66e-23;33!CL:0002057;7.66e-23;33!CL:0000349;2.56e-22;19!CL:0000473;6.01e-16;39!CL:0000234;6.01e-16;39!CL:0002541;4.36e-12;3!CL:0002577;4.53e-12;3!CL:0000576;5.96e-12;48!CL:0002536;1.41e-08;2!CL:0002537;7.87e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.07e-22,19;CL:0000860,2.52e-20,42;CL:0002057,2.52e-20,42;CL:0000473,2.85e-17,48;CL:0000234,2.85e-17,48;CL:0002194,5.17e-13,59;CL:0000576,5.17e-13,59;CL:0000040,5.17e-13,59;CL:0000559,5.17e-13,59;CL:0000839,1.01e-12,66;CL:0000557,1.79e-12,67;CL:0002009,1.82e-12,61;CL:0002577,2.86e-12,3;CL:0002541,8.73e-12,3;CL:0000766,2.47e-11,72;CL:0002536,7.58e-09,2;CL:0002537,7.83e-08,5;CL:0000763,3.55e-07,108;CL:0000049,3.55e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.34e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.45e-07;5!DOID:450;2.45e-07;5!DOID:66;2.45e-07;5!DOID:423;2.45e-07;5!DOID:0080000;2.45e-07;5!DOID:11722;2.45e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.19e-07,5;DOID:450,3.19e-07,5;DOID:66,3.19e-07,5;DOID:423,3.19e-07,5;DOID:0080000,3.19e-07,5;DOID:11722,3.19e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.77e-11!14;UBERON:0000158!6.77e-11!14;UBERON:0000062!7.53e-09!511;UBERON:0004923!1.38e-08!57;UBERON:0003124!2.17e-08!7;UBERON:0002097!1.18e-07!40;UBERON:0002199!2.36e-07!45;UBERON:0002416!2.36e-07!45;UBERON:0002371!4.84e-07!80;UBERON:0000468!5.09e-07!659;UBERON:0002204!7.59e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.04e-23;10!UBERON:0000158;1.04e-23;10!UBERON:0000478;2.35e-20;24!UBERON:0001987;3.23e-15;4!UBERON:0000305;6.08e-14;7!UBERON:0003124;4.36e-12;3!UBERON:0000920;4.36e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.47e-37,14;UBERON:0000158,3.47e-37,14;UBERON:0003124,1.29e-25,7;UBERON:0000478,1.63e-20,24;UBERON:0001987,1.40e-15,4;UBERON:0004340,1.40e-15,4;UBERON:0000305,3.91e-14,7;UBERON:0004871,2.55e-12,8;UBERON:0000920,8.73e-12,3;UBERON:0002371,1.57e-10,76;UBERON:0003081,1.27e-09,203;UBERON:0001474,1.78e-09,82;UBERON:0004923,2.66e-09,66;UBERON:0004765,2.71e-08,90;UBERON:0002405,6.64e-08,93;UBERON:0002390,2.61e-07,98;UBERON:0003061,2.61e-07,98;UBERON:0001434,4.33e-07,100 | |||
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| |||
|short_description=p8@EMILIN2 | |||
}} |
Revision as of 17:10, 11 September 2013
Short description: | p8@EMILIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_EMILIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -215bp_to_ENST00000254528, ENST00000308080, NM_032048, uc002kln.2_5end |
EntrezGene: | EMILIN2 |
HGNC: | 19881 |
UniProt: | Q9BXX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.07e-22 | 19 |
classical monocyte | 2.52e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-20 | 42 |
defensive cell | 2.85e-17 | 48 |
phagocyte | 2.85e-17 | 48 |
monopoietic cell | 5.17e-13 | 59 |
monocyte | 5.17e-13 | 59 |
monoblast | 5.17e-13 | 59 |
promonocyte | 5.17e-13 | 59 |
myeloid lineage restricted progenitor cell | 1.01e-12 | 66 |
granulocyte monocyte progenitor cell | 1.79e-12 | 67 |
macrophage dendritic cell progenitor | 1.82e-12 | 61 |
placental epithelial cell | 2.86e-12 | 3 |
chorionic membrane mesenchymal stem cell | 8.73e-12 | 3 |
myeloid leukocyte | 2.47e-11 | 72 |
amniotic epithelial cell | 7.58e-09 | 2 |
amnion mesenchymal stem cell | 7.83e-08 | 5 |
myeloid cell | 3.55e-07 | 108 |
common myeloid progenitor | 3.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.47e-37 | 14 |
membranous layer | 3.47e-37 | 14 |
chorion | 1.29e-25 | 7 |
extraembryonic structure | 1.63e-20 | 24 |
placenta | 1.40e-15 | 4 |
allantois | 1.40e-15 | 4 |
amnion | 3.91e-14 | 7 |
somatic layer of lateral plate mesoderm | 2.55e-12 | 8 |
egg chorion | 8.73e-12 | 3 |
bone marrow | 1.57e-10 | 76 |
lateral plate mesoderm | 1.27e-09 | 203 |
bone element | 1.78e-09 | 82 |
organ component layer | 2.66e-09 | 66 |
skeletal element | 2.71e-08 | 90 |
immune system | 6.64e-08 | 93 |
hematopoietic system | 2.61e-07 | 98 |
blood island | 2.61e-07 | 98 |
skeletal system | 4.33e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.19e-07 | 5 |
myotonic disease | 3.19e-07 | 5 |
muscle tissue disease | 3.19e-07 | 5 |
myopathy | 3.19e-07 | 5 |
muscular disease | 3.19e-07 | 5 |
myotonic dystrophy | 3.19e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.