FFCP PHASE1:Hg19::chr19:17516543..17516563,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=93343|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25153|TSSclassifier=S|UniProt=E9PLZ8|association_with_transcript=0bp_to_ENST00000500836,ENST00000528604,uc002ngm.1_5end|description=CAGE_peak_4_at_FAM125A_5end|id=chr19:17516543..17516563,+|ontology_enrichment_celltype=CL:0000037!8.63e-51!172;CL:0000566!8.63e-51!172;CL:0002087!2.67e-49!119;CL:0002032!7.77e-49!165;CL:0000837!7.77e-49!165;CL:0000738!2.64e-48!140;CL:0002031!5.59e-48!124;CL:0000988!1.43e-47!182;CL:0000839!1.64e-29!70;CL:0000557!7.15e-29!71;CL:0000766!8.50e-29!76;CL:0000763!5.19e-28!112;CL:0000049!5.19e-28!112;CL:0002194!5.41e-28!63;CL:0000576!5.41e-28!63;CL:0000040!5.41e-28!63;CL:0000559!5.41e-28!63;CL:0002009!1.00e-26!65;CL:0000860!9.36e-23!45;CL:0002057!3.80e-21!42;CL:0000542!1.09e-18!53;CL:0000051!1.09e-18!53;CL:0000838!2.46e-18!52;CL:0000084!1.03e-11!25;CL:0000827!1.03e-11!25;CL:0000791!6.15e-11!18;CL:0000789!6.15e-11!18;CL:0002420!6.15e-11!18;CL:0002419!6.15e-11!18;CL:0000790!6.15e-11!18;CL:0000134!2.23e-10!358;CL:0002320!4.24e-09!365;CL:0000625!1.79e-07!11;CL:0000219!7.31e-07!390|ontology_enrichment_celltype_v019=CL:0000576;4.63e-20;48!CL:0000860;9.10e-20;33!CL:0002057;9.10e-20;33!CL:0000473;1.39e-19;39!CL:0000234;1.39e-19;39!CL:0002087;2.66e-16;104!CL:0000766;5.98e-16;69!CL:0000791;8.53e-15;18!CL:0000789;8.53e-15;18!CL:0002419;8.53e-15;18!CL:0000084;2.88e-14;25!CL:0000542;2.46e-13;53!CL:0000738;7.52e-13;136!CL:0000625;5.45e-10;11!CL:0000988;3.10e-09;177!CL:0000763;5.14e-09;100!CL:0000945;8.41e-08;24|ontology_enrichment_celltype_v019_2=CL:0002087,5.51e-62,115;CL:0000738,7.73e-61,136;CL:0002031,7.83e-59,120;CL:0000037,3.35e-55,168;CL:0002032,3.65e-52,161;CL:0000837,3.65e-52,161;CL:0000988,9.03e-51,177;CL:0000766,5.33e-37,72;CL:0000557,4.37e-36,67;CL:0000839,8.05e-36,66;CL:0002194,6.10e-35,59;CL:0000576,6.10e-35,59;CL:0000040,6.10e-35,59;CL:0000559,6.10e-35,59;CL:0002009,4.59e-33,61;CL:0000473,3.44e-32,48;CL:0000234,3.44e-32,48;CL:0000860,2.10e-28,42;CL:0002057,2.10e-28,42;CL:0000763,4.89e-27,108;CL:0000049,4.89e-27,108;CL:0000542,2.63e-23,53;CL:0000051,2.63e-23,53;CL:0000838,8.27e-23,52;CL:0000791,7.57e-15,18;CL:0000789,7.57e-15,18;CL:0002420,7.57e-15,18;CL:0002419,7.57e-15,18;CL:0000790,7.57e-15,18;CL:0000134,4.31e-14,354;CL:0000084,4.62e-14,25;CL:0000827,4.62e-14,25;CL:0002320,5.05e-13,361;CL:0000625,6.03e-10,11;CL:0000219,1.05e-09,386;CL:0002393,3.07e-08,9;CL:0002397,3.07e-08,9;CL:0000945,5.36e-08,24;CL:0000826,5.36e-08,24;CL:0000236,6.35e-07,14|ontology_enrichment_development_v019=CL:0002057;5.23e-20;42!CL:0000790;8.53e-15;18!CL:0000051;2.46e-13;53!CL:0000049;4.32e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.17e-33!102;UBERON:0003061!3.17e-33!102;UBERON:0002193!1.01e-31!112;UBERON:0002405!1.66e-27!115;UBERON:0002371!4.36e-25!80;UBERON:0001474!2.01e-21!86;UBERON:0004765!4.14e-14!101;UBERON:0001434!4.14e-14!101;UBERON:0002384!1.27e-08!375;UBERON:0003081!1.07e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.94e-42,98;UBERON:0003061,2.94e-42,98;UBERON:0002193,4.55e-39,108;UBERON:0002405,1.41e-33,93;UBERON:0002371,9.83e-33,76;UBERON:0001474,1.88e-29,82;UBERON:0004765,1.14e-24,90;UBERON:0001434,7.20e-20,100;UBERON:0002384,2.60e-12,371;UBERON:0003081,4.58e-12,203|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,2.52164238968239,2.13461532569859,2.44003422072406,6.68719270643137,4.22212337906934,4.79929982279836,0,0,0,1.16200800870452,1.27952309238679,2.64240395401362,5.53995408531877,2.20598892217156,3.68918480216948,6.71746422719773,4.21061765824673,4.37878464978117,1.30858414901608,0.755751887377619,1.21292030593908,2.09186133215116,2.05583944010913,3.09706370895104,10.3569261235974,7.42866048934392,7.56743135643473,2.41321976515633,1.93645405075148,1.35426486594342,1.50593871634084,1.09162460023138,1.12361742222542,7.34601341690166,3.85114832491312,4.47535988059329,2.96866170168044,4.78712778291916,4.26224750532694,6.38460324982885,3.97169657283798,4.35975574296902,11.0549412712967,5.21482918420201,5.42972111762792,6.05399502633369,5.89244217580104,6.96217252369946,2.74631872205524,5.10250319916104,3.56419697364239,3.93150209012733,4.05477610672067,3.05378614724452,8.26536956849621,4.37616689837998,3.47061892152804,7.03984977845291,2.73069305631066,2.66852776159066,2.13365111283254,8.00791974072025,2.29900975981793,1.98313461835459,5.72432252721218,2.27685187643779,1.76171156811282,2.29363936875137,7.93027971474155,2.80254281490768,3.423993102076,5.90129310341499,3.14408610199332,3.28962398399215,3.8452893939856,4.23698946623668,8.04861269749047,1.94826728407911,5.34770193048833,5.00830042707223,7.08908462667588,5.1452734115353,7.42929654408916,5.59255194507476,7.39970570716543,5.25065033793112,2.89803085735052,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25153 | |||
|TSSclassifier=S | |||
|UniProt=E9PLZ8 | |||
|association_with_transcript=0bp_to_ENST00000500836,ENST00000528604,uc002ngm.1_5end | |||
|description=CAGE_peak_4_at_FAM125A_5end | |||
|id=chr19:17516543..17516563,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.63e-51!172;CL:0000566!8.63e-51!172;CL:0002087!2.67e-49!119;CL:0002032!7.77e-49!165;CL:0000837!7.77e-49!165;CL:0000738!2.64e-48!140;CL:0002031!5.59e-48!124;CL:0000988!1.43e-47!182;CL:0000839!1.64e-29!70;CL:0000557!7.15e-29!71;CL:0000766!8.50e-29!76;CL:0000763!5.19e-28!112;CL:0000049!5.19e-28!112;CL:0002194!5.41e-28!63;CL:0000576!5.41e-28!63;CL:0000040!5.41e-28!63;CL:0000559!5.41e-28!63;CL:0002009!1.00e-26!65;CL:0000860!9.36e-23!45;CL:0002057!3.80e-21!42;CL:0000542!1.09e-18!53;CL:0000051!1.09e-18!53;CL:0000838!2.46e-18!52;CL:0000084!1.03e-11!25;CL:0000827!1.03e-11!25;CL:0000791!6.15e-11!18;CL:0000789!6.15e-11!18;CL:0002420!6.15e-11!18;CL:0002419!6.15e-11!18;CL:0000790!6.15e-11!18;CL:0000134!2.23e-10!358;CL:0002320!4.24e-09!365;CL:0000625!1.79e-07!11;CL:0000219!7.31e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.63e-20;48!CL:0000860;9.10e-20;33!CL:0002057;9.10e-20;33!CL:0000473;1.39e-19;39!CL:0000234;1.39e-19;39!CL:0002087;2.66e-16;104!CL:0000766;5.98e-16;69!CL:0000791;8.53e-15;18!CL:0000789;8.53e-15;18!CL:0002419;8.53e-15;18!CL:0000084;2.88e-14;25!CL:0000542;2.46e-13;53!CL:0000738;7.52e-13;136!CL:0000625;5.45e-10;11!CL:0000988;3.10e-09;177!CL:0000763;5.14e-09;100!CL:0000945;8.41e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.51e-62,115;CL:0000738,7.73e-61,136;CL:0002031,7.83e-59,120;CL:0000037,3.35e-55,168;CL:0002032,3.65e-52,161;CL:0000837,3.65e-52,161;CL:0000988,9.03e-51,177;CL:0000766,5.33e-37,72;CL:0000557,4.37e-36,67;CL:0000839,8.05e-36,66;CL:0002194,6.10e-35,59;CL:0000576,6.10e-35,59;CL:0000040,6.10e-35,59;CL:0000559,6.10e-35,59;CL:0002009,4.59e-33,61;CL:0000473,3.44e-32,48;CL:0000234,3.44e-32,48;CL:0000860,2.10e-28,42;CL:0002057,2.10e-28,42;CL:0000763,4.89e-27,108;CL:0000049,4.89e-27,108;CL:0000542,2.63e-23,53;CL:0000051,2.63e-23,53;CL:0000838,8.27e-23,52;CL:0000791,7.57e-15,18;CL:0000789,7.57e-15,18;CL:0002420,7.57e-15,18;CL:0002419,7.57e-15,18;CL:0000790,7.57e-15,18;CL:0000134,4.31e-14,354;CL:0000084,4.62e-14,25;CL:0000827,4.62e-14,25;CL:0002320,5.05e-13,361;CL:0000625,6.03e-10,11;CL:0000219,1.05e-09,386;CL:0002393,3.07e-08,9;CL:0002397,3.07e-08,9;CL:0000945,5.36e-08,24;CL:0000826,5.36e-08,24;CL:0000236,6.35e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-20;42!CL:0000790;8.53e-15;18!CL:0000051;2.46e-13;53!CL:0000049;4.32e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-33!102;UBERON:0003061!3.17e-33!102;UBERON:0002193!1.01e-31!112;UBERON:0002405!1.66e-27!115;UBERON:0002371!4.36e-25!80;UBERON:0001474!2.01e-21!86;UBERON:0004765!4.14e-14!101;UBERON:0001434!4.14e-14!101;UBERON:0002384!1.27e-08!375;UBERON:0003081!1.07e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.94e-42,98;UBERON:0003061,2.94e-42,98;UBERON:0002193,4.55e-39,108;UBERON:0002405,1.41e-33,93;UBERON:0002371,9.83e-33,76;UBERON:0001474,1.88e-29,82;UBERON:0004765,1.14e-24,90;UBERON:0001434,7.20e-20,100;UBERON:0002384,2.60e-12,371;UBERON:0003081,4.58e-12,203 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,2.52164238968239,2.13461532569859,2.44003422072406,6.68719270643137,4.22212337906934,4.79929982279836,0,0,0,1.16200800870452,1.27952309238679,2.64240395401362,5.53995408531877,2.20598892217156,3.68918480216948,6.71746422719773,4.21061765824673,4.37878464978117,1.30858414901608,0.755751887377619,1.21292030593908,2.09186133215116,2.05583944010913,3.09706370895104,10.3569261235974,7.42866048934392,7.56743135643473,2.41321976515633,1.93645405075148,1.35426486594342,1.50593871634084,1.09162460023138,1.12361742222542,7.34601341690166,3.85114832491312,4.47535988059329,2.96866170168044,4.78712778291916,4.26224750532694,6.38460324982885,3.97169657283798,4.35975574296902,11.0549412712967,5.21482918420201,5.42972111762792,6.05399502633369,5.89244217580104,6.96217252369946,2.74631872205524,5.10250319916104,3.56419697364239,3.93150209012733,4.05477610672067,3.05378614724452,8.26536956849621,4.37616689837998,3.47061892152804,7.03984977845291,2.73069305631066,2.66852776159066,2.13365111283254,8.00791974072025,2.29900975981793,1.98313461835459,5.72432252721218,2.27685187643779,1.76171156811282,2.29363936875137,7.93027971474155,2.80254281490768,3.423993102076,5.90129310341499,3.14408610199332,3.28962398399215,3.8452893939856,4.23698946623668,8.04861269749047,1.94826728407911,5.34770193048833,5.00830042707223,7.08908462667588,5.1452734115353,7.42929654408916,5.59255194507476,7.39970570716543,5.25065033793112,2.89803085735052,2.37258501059297,7.22360235842225,0,3.85251765171725,1.91610246800961,5.49803912772208,6.57851199250707,4.45991580053735,3.25541726928209,4.75226022224187,2.10805166708882,5.50342427963999,3.74792179657038,8.28720382154059,6.56902397536837,4.63695509416885,2.40696176205157,4.19990771260117,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.43917392846563,0.785874452986276,0,0,3.57002133020152,2.43781632218974,2.26028532882071,2.62339686735876,1.14398982156026,2.22874500797739,1.19257444420023,0,0,0,0.419499436209906,0.825354125820202,1.46296476575767,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,1.3394959242612,1.57170560838319,0.900891843866578,0,0,1.64881569537367,0,0,0,0,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0.49333509683432,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0,0,0.272746120590835,0,0.853815942907168,0.530119073285941,0.929551542956147,0.725627385107593,0.252320850875628,0,0,1.92972281457866,1.38134921352481,0,0,1.18306800039844,0.337169380156203,0.723033089650446,0.441175890929576,0.435758888184812,0,1.21348177344148,1.17732879075208,0.38474715694639,0,0,0.4115740113314,0,3.80265104465493,1.96565443335525,2.36315962672562,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,1.29929802984966,0,0.761016608938393,0,0,3.44703808522356,2.57404691653161,2.22946743433092,0,0,0,0,0,0.383382679165211,1.47798971368783,3.78608266256872,1.4512968087854,3.89123874225796,2.39860623510122,0.063497894292169,0,0,0,0,0.600686115687835,0.571652865261156,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,2.00169191121407,1.62786481617433,0,0.325736184293735,4.26470338491055,0,0,0.871533458600294,0.499864955910285,6.08118903205952,2.51128545716063,2.10833939483032,0,0,0,0,0,0,3.6988097517864,7.68419964787516,5.39068937148793,4.10697716095195,0,0,0,0.167516265334349,0,1.49801404789436,0,0.414415513436035,0.24538298343828,0,0,1.24782516918484,0.713715955188647,2.36553622550902,1.87426263988341,0,0,0,0,0,0,0,0,4.34212854858063,2.15714200818617,2.77491650288955,0,0,0,0.744323423456331,0,0,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.459257792658427,0,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.422206515571503,0,0.850468526382578,0,1.54227252690289,0.270946437543853,1.00337954770971,0.509752546090077,0,0,0.438519753291869,0.522870902049801,0,0,0,3.09123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.571890581771475,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.487426979262569,0,0.272999822815972,0,1.13008116620243,0.551365343546124,3.3171948762061,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.573645408816206,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,1.08890984861323,3.29503302718727,2.15252686335615,0,0.443430153536676,0.459446800413919,2.02979043692868,2.29391162142713,3.98753031021914,5.00286728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| |||
|short_description=p4@FAM125A | |||
}} |
Revision as of 19:18, 11 September 2013
Short description: | p4@FAM125A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FAM125A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000500836, ENST00000528604, uc002ngm.1_5end |
EntrezGene: | FAM125A |
HGNC: | 25153 |
UniProt: | E9PLZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.94e-42 | 98 |
blood island | 2.94e-42 | 98 |
hemolymphoid system | 4.55e-39 | 108 |
immune system | 1.41e-33 | 93 |
bone marrow | 9.83e-33 | 76 |
bone element | 1.88e-29 | 82 |
skeletal element | 1.14e-24 | 90 |
skeletal system | 7.20e-20 | 100 |
connective tissue | 2.60e-12 | 371 |
lateral plate mesoderm | 4.58e-12 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.