FFCP PHASE1:Hg19::chr1:159046532..159046595,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9447|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=357|TSSclassifier=S|UniProt=O14862|association_with_transcript=51bp_to_NM_004833,uc001ftj.1_5end|coexpression_cluster_id=C21|description=CAGE_peak_1_at_AIM2_5end|id=chr1:159046532..159046595,-|ontology_enrichment_celltype=CL:0000738!2.67e-45!140;CL:0002087!1.46e-44!119;CL:0002031!5.26e-39!124;CL:0000037!2.29e-38!172;CL:0000566!2.29e-38!172;CL:0002032!1.68e-37!165;CL:0000837!1.68e-37!165;CL:0000988!3.22e-37!182;CL:0002057!6.91e-26!42;CL:0000542!3.61e-23!53;CL:0000051!3.61e-23!53;CL:0000860!6.99e-23!45;CL:0000838!1.58e-22!52;CL:0000766!1.97e-22!76;CL:0002194!2.97e-19!63;CL:0000576!2.97e-19!63;CL:0000040!2.97e-19!63;CL:0000559!2.97e-19!63;CL:0002009!8.27e-19!65;CL:0000945!3.21e-18!24;CL:0000826!3.21e-18!24;CL:0000557!4.03e-17!71;CL:0000839!6.08e-17!70;CL:0000763!1.27e-15!112;CL:0000049!1.27e-15!112;CL:0000236!9.07e-11!14;CL:0000134!2.04e-09!358;CL:0002320!1.81e-08!365|ontology_enrichment_celltype_v019=CL:0000945;2.03e-24;24!CL:0000860;3.77e-24;33!CL:0002057;3.77e-24;33!CL:0000576;2.58e-20;48!CL:0002087;9.28e-20;104!CL:0000473;5.88e-18;39!CL:0000234;5.88e-18;39!CL:0000542;1.22e-17;53!CL:0000766;6.07e-14;69!CL:0000738;1.57e-13;136!CL:0000236;2.27e-13;13!CL:0000988;3.28e-09;177!CL:0000094;6.84e-08;8!CL:0000763;1.60e-07;100!CL:0000081;5.52e-07;11!CL:0000084;5.98e-07;25|ontology_enrichment_celltype_v019_2=CL:0002087,9.17e-61,115;CL:0000738,1.39e-59,136;CL:0002031,1.82e-52,120;CL:0000988,6.34e-48,177;CL:0002032,8.25e-48,161;CL:0000837,8.25e-48,161;CL:0000037,9.34e-48,168;CL:0000860,2.30e-33,42;CL:0002057,2.30e-33,42;CL:0000766,8.18e-31,72;CL:0000542,2.59e-30,53;CL:0000051,2.59e-30,53;CL:0000473,5.08e-30,48;CL:0000234,5.08e-30,48;CL:0000838,1.91e-29,52;CL:0002194,1.03e-26,59;CL:0000576,1.03e-26,59;CL:0000040,1.03e-26,59;CL:0000559,1.03e-26,59;CL:0002009,2.57e-25,61;CL:0000945,1.96e-24,24;CL:0000826,1.96e-24,24;CL:0000839,1.72e-23,66;CL:0000557,6.68e-23,67;CL:0000763,5.50e-19,108;CL:0000049,5.50e-19,108;CL:0000236,2.56e-14,14;CL:0000134,7.94e-14,354;CL:0002320,6.49e-13,361;CL:0000219,3.89e-10,386;CL:0002393,6.61e-08,9;CL:0002397,6.61e-08,9;CL:0000094,7.14e-08,8;CL:0000084,5.45e-07,25;CL:0000827,5.45e-07,25;CL:0000081,5.72e-07,11;CL:0000048,6.44e-07,427|ontology_enrichment_development_v019=CL:0002057;7.92e-24;42!CL:0000051;1.22e-17;53!CL:0000049;7.63e-07;108|ontology_enrichment_disease=DOID:0060058!1.73e-07!10|ontology_enrichment_disease_v019=DOID:0060058;7.62e-10;10|ontology_enrichment_disease_v019_2=DOID:0060058,7.23e-10,10|ontology_enrichment_uberon=UBERON:0002390!3.20e-27!102;UBERON:0003061!3.20e-27!102;UBERON:0002193!3.12e-24!112;UBERON:0002371!3.68e-15!80;UBERON:0001474!1.09e-13!86;UBERON:0004765!1.51e-11!101;UBERON:0001434!1.51e-11!101;UBERON:0000178!1.82e-11!15;UBERON:0000179!1.82e-11!15;UBERON:0000463!1.82e-11!15;UBERON:0002405!4.87e-11!115;UBERON:0007023!1.11e-09!115;UBERON:0002384!3.88e-08!375|ontology_enrichment_uberon_v019=UBERON:0000178;5.66e-15;15!UBERON:0000179;5.66e-15;15!UBERON:0000463;5.66e-15;15!UBERON:0002390;1.75e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.68e-36,98;UBERON:0003061,5.68e-36,98;UBERON:0002193,3.65e-33,108;UBERON:0002405,1.05e-21,93;UBERON:0002371,1.58e-19,76;UBERON:0001474,3.48e-18,82;UBERON:0004765,3.49e-15,90;UBERON:0000178,5.61e-15,15;UBERON:0000179,5.61e-15,15;UBERON:0000463,5.61e-15,15;UBERON:0001434,8.64e-13,100;UBERON:0002384,1.49e-12,371;UBERON:0003081,3.82e-07,203|phase1_expression=0,0,0,0,0,0,0,5.05375898741465,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,33.2398315003588,26.5184903923325,29.437832211316,3.54027849164014,4.98978217526377,1.23852898652861,0,0,0,84.9040518360106,62.9809699919277,0.293600439334847,4.9859586767869,7.82123345133553,4.77423915574874,2.46307021663917,2.26725566213286,1.03030227053675,3.48955773070955,2.64513160582167,6.0646015296954,1.62700325833979,1.6446715520873,0.309706370895104,38.8384729634903,29.4584812508466,53.2085017249317,16.2030469946211,5.16387746867061,6.77132432971709,2.44715041405386,1.36453075028923,2.9214052977861,33.6692281607993,8.34415470397843,19.8194508997703,38.2627508216591,39.6932678667047,41.770025552204,32.79364396503,7.37600792098482,8.71951148593805,30.4010884960659,21.3807996552283,31.9267601716521,77.4911363370712,18.7821594353658,35.1273250059382,8.45021145247767,5.31510749912609,11.9505427939774,5.39177429503177,4.50530678524519,11.5722422421898,1.99508920618874,4.37616689837998,15.3437889162293,61.5986855614629,72.6364352978635,58.7076107549946,87.0529654035675,108.907708473795,58.6247488753573,56.1888141867133,50.5648489903743,26.1837965790346,17.6171156811282,19.4959346343867,0,5.04457706683382,0,5.11445402295966,2.75107533924415,9.66327045297693,0.668745981562712,0.651844533267181,0.473447805734733,0,23.2847854890013,10.6058126690941,13.2920336750173,16.519035689666,11.0158534964081,10.0145697621106,0,0,0.289803085735052,0,0,1.04535523804977,3.6258989663221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0,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,1.55149493792843,1.91910583710883,0,1.42095601639213,1.1794195716213,0.560659312903067,0.0636471582781649,0.202117188958219,0.653150243690884,0.342233301085281,31.1166484927394,7.17222053926764,0,3.8259536247158,0.320182037633146,0,0,0,0.122241444182866,0,0,17.3095462488283,27.568890338078|short_description=p1@AIM2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=357 | |||
|TSSclassifier=S | |||
|UniProt=O14862 | |||
|association_with_transcript=51bp_to_NM_004833,uc001ftj.1_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_1_at_AIM2_5end | |||
|id=chr1:159046532..159046595,- | |||
|ontology_enrichment_celltype=CL:0000738!2.67e-45!140;CL:0002087!1.46e-44!119;CL:0002031!5.26e-39!124;CL:0000037!2.29e-38!172;CL:0000566!2.29e-38!172;CL:0002032!1.68e-37!165;CL:0000837!1.68e-37!165;CL:0000988!3.22e-37!182;CL:0002057!6.91e-26!42;CL:0000542!3.61e-23!53;CL:0000051!3.61e-23!53;CL:0000860!6.99e-23!45;CL:0000838!1.58e-22!52;CL:0000766!1.97e-22!76;CL:0002194!2.97e-19!63;CL:0000576!2.97e-19!63;CL:0000040!2.97e-19!63;CL:0000559!2.97e-19!63;CL:0002009!8.27e-19!65;CL:0000945!3.21e-18!24;CL:0000826!3.21e-18!24;CL:0000557!4.03e-17!71;CL:0000839!6.08e-17!70;CL:0000763!1.27e-15!112;CL:0000049!1.27e-15!112;CL:0000236!9.07e-11!14;CL:0000134!2.04e-09!358;CL:0002320!1.81e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.03e-24;24!CL:0000860;3.77e-24;33!CL:0002057;3.77e-24;33!CL:0000576;2.58e-20;48!CL:0002087;9.28e-20;104!CL:0000473;5.88e-18;39!CL:0000234;5.88e-18;39!CL:0000542;1.22e-17;53!CL:0000766;6.07e-14;69!CL:0000738;1.57e-13;136!CL:0000236;2.27e-13;13!CL:0000988;3.28e-09;177!CL:0000094;6.84e-08;8!CL:0000763;1.60e-07;100!CL:0000081;5.52e-07;11!CL:0000084;5.98e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,9.17e-61,115;CL:0000738,1.39e-59,136;CL:0002031,1.82e-52,120;CL:0000988,6.34e-48,177;CL:0002032,8.25e-48,161;CL:0000837,8.25e-48,161;CL:0000037,9.34e-48,168;CL:0000860,2.30e-33,42;CL:0002057,2.30e-33,42;CL:0000766,8.18e-31,72;CL:0000542,2.59e-30,53;CL:0000051,2.59e-30,53;CL:0000473,5.08e-30,48;CL:0000234,5.08e-30,48;CL:0000838,1.91e-29,52;CL:0002194,1.03e-26,59;CL:0000576,1.03e-26,59;CL:0000040,1.03e-26,59;CL:0000559,1.03e-26,59;CL:0002009,2.57e-25,61;CL:0000945,1.96e-24,24;CL:0000826,1.96e-24,24;CL:0000839,1.72e-23,66;CL:0000557,6.68e-23,67;CL:0000763,5.50e-19,108;CL:0000049,5.50e-19,108;CL:0000236,2.56e-14,14;CL:0000134,7.94e-14,354;CL:0002320,6.49e-13,361;CL:0000219,3.89e-10,386;CL:0002393,6.61e-08,9;CL:0002397,6.61e-08,9;CL:0000094,7.14e-08,8;CL:0000084,5.45e-07,25;CL:0000827,5.45e-07,25;CL:0000081,5.72e-07,11;CL:0000048,6.44e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.92e-24;42!CL:0000051;1.22e-17;53!CL:0000049;7.63e-07;108 | |||
|ontology_enrichment_disease=DOID:0060058!1.73e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.62e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.23e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.20e-27!102;UBERON:0003061!3.20e-27!102;UBERON:0002193!3.12e-24!112;UBERON:0002371!3.68e-15!80;UBERON:0001474!1.09e-13!86;UBERON:0004765!1.51e-11!101;UBERON:0001434!1.51e-11!101;UBERON:0000178!1.82e-11!15;UBERON:0000179!1.82e-11!15;UBERON:0000463!1.82e-11!15;UBERON:0002405!4.87e-11!115;UBERON:0007023!1.11e-09!115;UBERON:0002384!3.88e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.66e-15;15!UBERON:0000179;5.66e-15;15!UBERON:0000463;5.66e-15;15!UBERON:0002390;1.75e-09;32 | |||
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| |||
|short_description=p1@AIM2 | |||
}} |
Revision as of 01:06, 12 September 2013
Short description: | p1@AIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AIM2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 51bp_to_NM_004833, uc001ftj.1_5end |
EntrezGene: | AIM2 |
HGNC: | 357 |
UniProt: | O14862 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.68e-36 | 98 |
blood island | 5.68e-36 | 98 |
hemolymphoid system | 3.65e-33 | 108 |
immune system | 1.05e-21 | 93 |
bone marrow | 1.58e-19 | 76 |
bone element | 3.48e-18 | 82 |
skeletal element | 3.49e-15 | 90 |
blood | 5.61e-15 | 15 |
haemolymphatic fluid | 5.61e-15 | 15 |
organism substance | 5.61e-15 | 15 |
skeletal system | 8.64e-13 | 100 |
connective tissue | 1.49e-12 | 371 |
lateral plate mesoderm | 3.82e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.23e-10 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.