FFCP PHASE1:Hg19::chr1:172502624..172502648,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-18bp_to_BC034700_5end|coexpression_cluster_id=C448|description=CAGE_peak_1_at_BC034700_5end|id=chr1:172502624..172502648,-|ontology_enrichment_celltype=CL:0000738!8.51e-24!140;CL:0000037!3.44e-21!172;CL:0000566!3.44e-21!172;CL:0000988!6.00e-20!182;CL:0002032!9.40e-19!165;CL:0000837!9.40e-19!165;CL:0002031!7.10e-17!124;CL:0002087!3.09e-15!119;CL:0002057!1.93e-13!42;CL:0000860!4.90e-12!45;CL:0000766!3.62e-11!76;CL:0000763!1.71e-10!112;CL:0000049!1.71e-10!112;CL:0000542!1.12e-08!53;CL:0000051!1.12e-08!53;CL:0000557!1.25e-08!71;CL:0000134!1.29e-08!358;CL:0000838!1.46e-08!52;CL:0002320!2.57e-08!365;CL:0002393!2.80e-08!9;CL:0002397!2.80e-08!9;CL:0000839!4.56e-08!70;CL:0000094!9.60e-08!8;CL:0000081!1.80e-07!11;CL:0000034!2.10e-07!444;CL:0002009!3.88e-07!65;CL:0000048!8.54e-07!430|ontology_enrichment_celltype_v019=CL:0000094;8.31e-21;8!CL:0000081;2.48e-18;11!CL:0002393;5.95e-16;6!CL:0002397;5.95e-16;6!CL:0000236;5.65e-09;13!CL:0000775;5.70e-09;3!CL:0000623;6.16e-09;3!CL:0000767;2.03e-08;3!CL:0000453;4.71e-08;5!CL:0000875;4.88e-08;3!CL:0002396;4.88e-08;3!CL:0000451;2.77e-07;10!CL:0000766;4.59e-07;69!CL:0000771;8.30e-07;2|ontology_enrichment_celltype_v019_2=CL:0000738,5.03e-32,136;CL:0000037,1.35e-28,168;CL:0000988,1.00e-27,177;CL:0002032,8.13e-25,161;CL:0000837,8.13e-25,161;CL:0002393,1.68e-22,9;CL:0002397,1.68e-22,9;CL:0000094,7.76e-21,8;CL:0002031,8.92e-20,120;CL:0000081,2.71e-18,11;CL:0000766,2.17e-15,72;CL:0000763,4.03e-15,108;CL:0000049,4.03e-15,108;CL:0002087,1.48e-14,115;CL:0000134,5.82e-11,354;CL:0002320,1.82e-10,361;CL:0000557,9.37e-10,67;CL:0000838,9.79e-10,52;CL:0000542,1.80e-09,53;CL:0000051,1.80e-09,53;CL:0000775,5.64e-09,3;CL:0000623,5.79e-09,3;CL:0000825,5.79e-09,3;CL:0000219,9.76e-09,386;CL:0000839,1.33e-08,66;CL:0000767,1.92e-08,3;CL:0000236,2.77e-08,14;CL:0000875,3.07e-08,3;CL:0002396,3.07e-08,3;CL:0000453,3.36e-08,5;CL:0000034,5.39e-08,441;CL:0000048,1.24e-07,427;CL:0000451,2.42e-07,10;CL:0000723,2.49e-07,433;CL:0000860,3.28e-07,42;CL:0002057,3.28e-07,42;CL:0000771,8.32e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.99e-11!102;UBERON:0003061!7.99e-11!102;UBERON:0002193!1.19e-08!112;UBERON:0002371!3.39e-08!80;UBERON:0001474!4.46e-08!86;UBERON:0002384!9.15e-08!375|ontology_enrichment_uberon_v019=UBERON:0000178;8.41e-09;15!UBERON:0000179;8.41e-09;15!UBERON:0000463;8.41e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.39e-14,98;UBERON:0003061,2.39e-14,98;UBERON:0002193,2.64e-12,108;UBERON:0002384,2.26e-10,371;UBERON:0002371,4.64e-10,76;UBERON:0001474,6.23e-09,82;UBERON:0000178,8.84e-09,15;UBERON:0000179,8.84e-09,15;UBERON:0000463,8.84e-09,15;UBERON:0004765,1.13e-07,90;UBERON:0003081,2.46e-07,203;UBERON:0002405,2.90e-07,93|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,5.50709987588466,4.60595277716655,2.47705797305722,0,0,0.369754010166788,0,0,4.40400659002271,10.5259127621057,5.21415563422368,16.058804432973,0,0,0,1.01778767145695,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.949387162322653,3.38008458099107,4.889898899196,7.33805259279316,2.3589012540764,3.00353785683013,2.73233497385036,3.99017841237748,2.78483348078726,2.92262646023414,3.51992488922645,0.546138611262131,0.889509253863555,9.81479511902967,0,2.87376219977242,1.32208974556972,0,21.0608798570496,11.1575065980478,12.2327433000073,2.64342657158052,3.92355994087075,0.790152254325231,1.180258620683,0.786021525498329,3.28962398399215,0.668745981562712,0.32592226663359,0.946895611469467,1.94826728407911,1.6711568532776,1.17842362989935,0.221533894583621,0,0.768547918354051,1.43065282315866,0.328875809207352,0.829050053357545,0,0.296573126324121,0,1.04535523804977,0,0,2.40539211837841,0.759059076058509,0.637130828648193,0,0,1.35517607169996,0.127986611154418,0,0.710331756132051,0,3.02410114837099,2.67440195783507,4.48955652036677,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,1.19245312152671,2.28797964312051,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.41798993307362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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_BC034700_5end | |||
|coexpression_cluster_id=C448 | |||
|description=CAGE_peak_1_at_BC034700_5end | |||
|id=chr1:172502624..172502648,- | |||
|ontology_enrichment_celltype=CL:0000738!8.51e-24!140;CL:0000037!3.44e-21!172;CL:0000566!3.44e-21!172;CL:0000988!6.00e-20!182;CL:0002032!9.40e-19!165;CL:0000837!9.40e-19!165;CL:0002031!7.10e-17!124;CL:0002087!3.09e-15!119;CL:0002057!1.93e-13!42;CL:0000860!4.90e-12!45;CL:0000766!3.62e-11!76;CL:0000763!1.71e-10!112;CL:0000049!1.71e-10!112;CL:0000542!1.12e-08!53;CL:0000051!1.12e-08!53;CL:0000557!1.25e-08!71;CL:0000134!1.29e-08!358;CL:0000838!1.46e-08!52;CL:0002320!2.57e-08!365;CL:0002393!2.80e-08!9;CL:0002397!2.80e-08!9;CL:0000839!4.56e-08!70;CL:0000094!9.60e-08!8;CL:0000081!1.80e-07!11;CL:0000034!2.10e-07!444;CL:0002009!3.88e-07!65;CL:0000048!8.54e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.31e-21;8!CL:0000081;2.48e-18;11!CL:0002393;5.95e-16;6!CL:0002397;5.95e-16;6!CL:0000236;5.65e-09;13!CL:0000775;5.70e-09;3!CL:0000623;6.16e-09;3!CL:0000767;2.03e-08;3!CL:0000453;4.71e-08;5!CL:0000875;4.88e-08;3!CL:0002396;4.88e-08;3!CL:0000451;2.77e-07;10!CL:0000766;4.59e-07;69!CL:0000771;8.30e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.03e-32,136;CL:0000037,1.35e-28,168;CL:0000988,1.00e-27,177;CL:0002032,8.13e-25,161;CL:0000837,8.13e-25,161;CL:0002393,1.68e-22,9;CL:0002397,1.68e-22,9;CL:0000094,7.76e-21,8;CL:0002031,8.92e-20,120;CL:0000081,2.71e-18,11;CL:0000766,2.17e-15,72;CL:0000763,4.03e-15,108;CL:0000049,4.03e-15,108;CL:0002087,1.48e-14,115;CL:0000134,5.82e-11,354;CL:0002320,1.82e-10,361;CL:0000557,9.37e-10,67;CL:0000838,9.79e-10,52;CL:0000542,1.80e-09,53;CL:0000051,1.80e-09,53;CL:0000775,5.64e-09,3;CL:0000623,5.79e-09,3;CL:0000825,5.79e-09,3;CL:0000219,9.76e-09,386;CL:0000839,1.33e-08,66;CL:0000767,1.92e-08,3;CL:0000236,2.77e-08,14;CL:0000875,3.07e-08,3;CL:0002396,3.07e-08,3;CL:0000453,3.36e-08,5;CL:0000034,5.39e-08,441;CL:0000048,1.24e-07,427;CL:0000451,2.42e-07,10;CL:0000723,2.49e-07,433;CL:0000860,3.28e-07,42;CL:0002057,3.28e-07,42;CL:0000771,8.32e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.99e-11!102;UBERON:0003061!7.99e-11!102;UBERON:0002193!1.19e-08!112;UBERON:0002371!3.39e-08!80;UBERON:0001474!4.46e-08!86;UBERON:0002384!9.15e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.41e-09;15!UBERON:0000179;8.41e-09;15!UBERON:0000463;8.41e-09;15 | |||
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| |||
|short_description=p1@BC034700 | |||
}} |
Revision as of 01:50, 12 September 2013
Short description: | p1@BC034700 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC034700_5end |
Coexpression cluster: | C448_Eosinophils_CD19_Neutrophils_immature_CD14_CD34_CD4 |
Association with transcript: | -18bp_to_BC034700_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.39e-14 | 98 |
blood island | 2.39e-14 | 98 |
hemolymphoid system | 2.64e-12 | 108 |
connective tissue | 2.26e-10 | 371 |
bone marrow | 4.64e-10 | 76 |
bone element | 6.23e-09 | 82 |
blood | 8.84e-09 | 15 |
haemolymphatic fluid | 8.84e-09 | 15 |
organism substance | 8.84e-09 | 15 |
skeletal element | 1.13e-07 | 90 |
lateral plate mesoderm | 2.46e-07 | 203 |
immune system | 2.90e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.