FFCP PHASE1:Hg19::chr1:21904551..21904569,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C77|description=CAGE_peak_at_chr1:21904551..21904569,-|id=chr1:21904551..21904569,-|ontology_enrichment_celltype=CL:0000775!1.11e-08!3;CL:0002322!1.16e-08!5;CL:0000630!6.82e-07!9|ontology_enrichment_celltype_v019=CL:0000062;4.88e-29;9!CL:0000775;8.17e-11;3!CL:0002322;6.21e-07;5|ontology_enrichment_celltype_v019_2=CL:0000062,6.61e-24,11;CL:0000375,6.61e-24,11;CL:0000335,6.61e-24,11;CL:0000775,8.17e-11,3;CL:0002322,6.04e-07,5|ontology_enrichment_development_v019=UBERON:0003099;2.73e-29;1!UBERON:0003852;2.73e-29;1!CL:0000335;6.35e-24;11!UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005705;2.73e-29;1!UBERON:0008193;2.73e-29;1!UBERON:0010912;2.73e-29;1!UBERON:0002514;2.73e-29;1!UBERON:0003457;2.73e-29;1!UBERON:0008907;2.73e-29;1!UBERON:0008001;2.73e-29;1!UBERON:0007213;2.73e-29;1!UBERON:0009891;2.73e-29;1!UBERON:0007914;2.73e-29;1!UBERON:0007375;2.73e-29;1!UBERON:0003323;2.73e-29;1!UBERON:0010258;2.73e-29;1!UBERON:0005253;2.73e-29;1!UBERON:0007842;2.73e-29;1!UBERON:0002397;2.73e-29;1!UBERON:0003113;2.73e-29;1!UBERON:0003277;2.73e-29;1!UBERON:0001709;2.73e-29;1!UBERON:0002244;2.73e-29;1!UBERON:0005620;2.73e-29;1!UBERON:0010364;2.73e-29;1!UBERON:0004288;2.73e-29;1!UBERON:0001474;1.27e-25;18!UBERON:0004765;6.16e-18;26!UBERON:0004089;2.21e-15;2!UBERON:0001434;1.29e-12;36!UBERON:0001708;2.35e-08;4!UBERON:0008895;2.35e-08;4!UBERON:0011159;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.78e-29,1;UBERON:0008193,1.78e-29,1;UBERON:0010912,1.78e-29,1;UBERON:0002514,1.78e-29,1;UBERON:0003457,1.78e-29,1;UBERON:0008907,1.78e-29,1;UBERON:0008001,1.78e-29,1;UBERON:0007213,1.78e-29,1;UBERON:0009891,1.78e-29,1;UBERON:0007914,1.78e-29,1;UBERON:0009292,1.78e-29,1;UBERON:0003099,1.78e-29,1;UBERON:0007375,1.78e-29,1;UBERON:0003323,1.78e-29,1;UBERON:0010258,1.78e-29,1;UBERON:0007842,1.78e-29,1;UBERON:0009494,1.78e-29,1;UBERON:0010042,1.78e-29,1;UBERON:0010045,1.78e-29,1;UBERON:0010259,1.78e-29,1;UBERON:0010359,1.78e-29,1;UBERON:0009526,1.78e-29,1;UBERON:0002397,1.78e-29,1;UBERON:0003113,1.78e-29,1;UBERON:0003277,1.78e-29,1;UBERON:0001709,1.78e-29,1;UBERON:0004066,1.78e-29,1;UBERON:0002244,1.78e-29,1;UBERON:0005620,1.78e-29,1;UBERON:0004362,1.78e-29,1;UBERON:0010364,1.78e-29,1;UBERON:0010046,1.78e-29,1;UBERON:0005868,1.78e-29,1;UBERON:0007238,1.78e-29,1;UBERON:0004288,1.78e-29,1;UBERON:0004068,1.78e-29,1;UBERON:0010334,1.78e-29,1;UBERON:0003852,1.78e-29,1;UBERON:0010253,1.78e-29,1;UBERON:0005253,1.78e-15,2;UBERON:0004089,1.78e-15,2;UBERON:0001708,2.11e-08,4;UBERON:0008895,2.11e-08,4;UBERON:0011159,5.70e-07,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0.929551542956147,0.207322110030741,1.51392510525377,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887808626565635,0,0,0.116210378459959,0,0,0,0,0.910455840033585,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,10.3473495244728,5.77566499444116,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.4126183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_at_chr1:21904551..21904569,- | |||
|id=chr1:21904551..21904569,- | |||
|ontology_enrichment_celltype=CL:0000775!1.11e-08!3;CL:0002322!1.16e-08!5;CL:0000630!6.82e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000062;4.88e-29;9!CL:0000775;8.17e-11;3!CL:0002322;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.61e-24,11;CL:0000375,6.61e-24,11;CL:0000335,6.61e-24,11;CL:0000775,8.17e-11,3;CL:0002322,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.73e-29;1!UBERON:0003852;2.73e-29;1!CL:0000335;6.35e-24;11!UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
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|short_description=p@chr1:21904551..21904569,- | |||
}} |
Revision as of 03:41, 12 September 2013
Short description: | p@chr1:21904551..21904569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:21904551..21904569, - |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.61e-24 | 11 |
osteoprogenitor cell | 6.61e-24 | 11 |
mesenchyme condensation cell | 6.61e-24 | 11 |
neutrophil | 8.17e-11 | 3 |
embryonic stem cell | 6.04e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.