FFCP PHASE1:Hg19::chr1:223537594..223537605,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55061|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25470|TSSclassifier=S|UniProt=Q5VX72,Q5VX71,B3KTY0|association_with_transcript=-50bp_to_ENST00000271787,ENST00000366877,ENST00000366878,NM_001037175,NM_017982,uc001hny.3,uc001hnz.2,uc010puw.1,uc010pux.1_5end|description=CAGE_peak_3_at_SUSD4_5end|id=chr1:223537594..223537605,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;2.39e-15;2!UBERON:0006601;2.80e-10;82!UBERON:0010227;1.58e-08;1!UBERON:0005425;1.58e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;1.58e-08;1!DOID:3149;1.58e-08;1|ontology_enrichment_disease_v019_2=DOID:3151,4.07e-08,1;DOID:3149,4.07e-08,1|ontology_enrichment_uberon=UBERON:0007023!2.08e-46!115;UBERON:0001049!3.35e-40!57;UBERON:0005068!3.35e-40!57;UBERON:0006241!3.35e-40!57;UBERON:0007135!3.35e-40!57;UBERON:0000955!1.36e-38!69;UBERON:0006238!1.36e-38!69;UBERON:0002780!8.24e-37!41;UBERON:0001890!8.24e-37!41;UBERON:0006240!8.24e-37!41;UBERON:0002616!4.67e-36!59;UBERON:0003080!1.15e-35!42;UBERON:0001017!1.20e-33!82;UBERON:0005743!1.23e-32!86;UBERON:0001893!1.47e-32!34;UBERON:0000073!1.87e-32!94;UBERON:0001016!1.87e-32!94;UBERON:0002020!2.66e-32!34;UBERON:0003528!2.66e-32!34;UBERON:0002791!4.80e-31!33;UBERON:0002346!1.21e-30!90;UBERON:0001869!1.24e-30!32;UBERON:0003075!8.94e-30!86;UBERON:0007284!8.94e-30!86;UBERON:0003056!3.46e-25!61;UBERON:0002619!1.22e-24!22;UBERON:0000153!1.31e-23!129;UBERON:0007811!1.31e-23!129;UBERON:0000033!2.19e-23!123;UBERON:0001950!1.26e-21!20;UBERON:0000956!5.43e-21!25;UBERON:0000203!5.43e-21!25;UBERON:0000924!6.86e-19!173;UBERON:0006601!6.86e-19!173;UBERON:0004121!5.11e-18!169;UBERON:0002308!3.68e-13!9;UBERON:0000125!3.68e-13!9;UBERON:0009663!3.79e-11!7;UBERON:0002420!6.84e-11!9;UBERON:0007245!6.84e-11!9;UBERON:0010009!6.84e-11!9;UBERON:0010011!6.84e-11!9;UBERON:0000454!6.84e-11!9;UBERON:0000025!2.25e-10!194;UBERON:0000200!5.85e-10!6;UBERON:0004111!7.61e-10!241;UBERON:0001872!1.29e-08!5;UBERON:0002298!3.41e-08!8;UBERON:0000064!5.79e-08!219;UBERON:0004732!7.61e-08!13;UBERON:0000369!1.50e-07!4;UBERON:0002435!1.50e-07!4;UBERON:0000204!1.50e-07!4;UBERON:0010082!1.50e-07!4;UBERON:0001871!6.59e-07!7;UBERON:0000475!8.02e-07!365|ontology_enrichment_uberon_v019=UBERON:0001869;9.44e-31;32!UBERON:0001893;2.94e-27;34!UBERON:0002791;1.14e-26;32!UBERON:0002780;2.69e-25;41!UBERON:0001890;2.69e-25;41!UBERON:0003528;9.31e-24;34!UBERON:0002020;9.31e-24;34!UBERON:0002619;5.65e-19;22!UBERON:0000369;9.47e-17;4!UBERON:0002435;9.47e-17;4!UBERON:0000204;9.47e-17;4!UBERON:0000956;1.17e-16;25!UBERON:0000203;1.17e-16;25!UBERON:0009663;1.26e-16;7!UBERON:0001873;2.39e-15;2!UBERON:0001954;2.39e-15;2!UBERON:0003022;2.39e-15;2!UBERON:0002421;2.39e-15;2!UBERON:0002600;2.39e-15;2!UBERON:0000073;1.62e-14;53!UBERON:0002616;1.62e-14;53!UBERON:0000955;2.76e-14;68!UBERON:0001017;3.03e-14;75!UBERON:0000349;1.63e-13;5!UBERON:0002420;5.62e-13;9!UBERON:0000125;5.62e-13;9!UBERON:0007245;5.62e-13;9!UBERON:0002308;5.62e-13;9!UBERON:0010009;5.62e-13;9!UBERON:0010011;5.62e-13;9!UBERON:0000454;5.62e-13;9!UBERON:0001950;6.16e-12;20!UBERON:0001016;3.86e-11;83!UBERON:0001723;1.54e-10;3!UBERON:0001033;1.54e-10;3!UBERON:0005383;1.54e-10;3!UBERON:0005382;1.54e-10;3!UBERON:0002902;1.58e-08;1!UBERON:0001882;1.58e-08;1!UBERON:0002022;1.58e-08;1!UBERON:0002079;1.58e-08;1!UBERON:0003112;1.58e-08;1!UBERON:0000941;1.58e-08;1!UBERON:0001785;1.58e-08;1!UBERON:0002464;1.58e-08;1!UBERON:0004904;1.58e-08;1!UBERON:0011158;1.58e-08;1!UBERON:0001021;1.58e-08;1!UBERON:0009899;1.58e-08;1!UBERON:0007190;1.58e-08;1!UBERON:0003128;1.58e-08;1!UBERON:0005403;1.58e-08;1!UBERON:0001703;1.58e-08;1!UBERON:0002241;1.58e-08;1!UBERON:0007023;9.53e-08;114!UBERON:0002021;7.91e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.80e-34,32;UBERON:0001893,2.30e-32,34;UBERON:0002780,6.04e-31,41;UBERON:0001890,6.04e-31,41;UBERON:0003080,6.04e-31,41;UBERON:0006240,6.04e-31,41;UBERON:0001049,2.79e-29,56;UBERON:0005068,2.79e-29,56;UBERON:0006241,2.79e-29,56;UBERON:0007135,2.79e-29,56;UBERON:0002791,3.45e-29,32;UBERON:0001017,7.30e-28,81;UBERON:0001016,1.06e-27,89;UBERON:0003528,2.13e-27,34;UBERON:0002020,2.13e-27,34;UBERON:0000073,4.42e-27,53;UBERON:0002616,4.42e-27,53;UBERON:0000955,1.41e-26,68;UBERON:0006238,1.41e-26,68;UBERON:0007023,6.39e-24,114;UBERON:0002346,2.57e-23,86;UBERON:0003056,2.90e-23,61;UBERON:0003075,8.00e-22,82;UBERON:0007284,8.00e-22,82;UBERON:0010314,6.99e-20,132;UBERON:0002619,3.87e-19,22;UBERON:0004121,9.53e-18,171;UBERON:0000924,9.53e-18,171;UBERON:0006601,9.53e-18,171;UBERON:0000956,8.37e-17,25;UBERON:0000203,8.37e-17,25;UBERON:0000369,1.32e-16,4;UBERON:0002435,1.32e-16,4;UBERON:0000204,1.32e-16,4;UBERON:0010082,1.32e-16,4;UBERON:0010371,1.45e-16,104;UBERON:0009663,1.98e-16,7;UBERON:0001954,9.32e-16,2;UBERON:0003022,9.32e-16,2;UBERON:0002421,9.32e-16,2;UBERON:0002600,9.32e-16,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55061 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25470 | |||
|TSSclassifier=S | |||
|UniProt=Q5VX72,Q5VX71,B3KTY0 | |||
|association_with_transcript=-50bp_to_ENST00000271787,ENST00000366877,ENST00000366878,NM_001037175,NM_017982,uc001hny.3,uc001hnz.2,uc010puw.1,uc010pux.1_5end | |||
|description=CAGE_peak_3_at_SUSD4_5end | |||
|id=chr1:223537594..223537605,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.39e-15;2!UBERON:0006601;2.80e-10;82!UBERON:0010227;1.58e-08;1!UBERON:0005425;1.58e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.58e-08;1!DOID:3149;1.58e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.07e-08,1;DOID:3149,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-46!115;UBERON:0001049!3.35e-40!57;UBERON:0005068!3.35e-40!57;UBERON:0006241!3.35e-40!57;UBERON:0007135!3.35e-40!57;UBERON:0000955!1.36e-38!69;UBERON:0006238!1.36e-38!69;UBERON:0002780!8.24e-37!41;UBERON:0001890!8.24e-37!41;UBERON:0006240!8.24e-37!41;UBERON:0002616!4.67e-36!59;UBERON:0003080!1.15e-35!42;UBERON:0001017!1.20e-33!82;UBERON:0005743!1.23e-32!86;UBERON:0001893!1.47e-32!34;UBERON:0000073!1.87e-32!94;UBERON:0001016!1.87e-32!94;UBERON:0002020!2.66e-32!34;UBERON:0003528!2.66e-32!34;UBERON:0002791!4.80e-31!33;UBERON:0002346!1.21e-30!90;UBERON:0001869!1.24e-30!32;UBERON:0003075!8.94e-30!86;UBERON:0007284!8.94e-30!86;UBERON:0003056!3.46e-25!61;UBERON:0002619!1.22e-24!22;UBERON:0000153!1.31e-23!129;UBERON:0007811!1.31e-23!129;UBERON:0000033!2.19e-23!123;UBERON:0001950!1.26e-21!20;UBERON:0000956!5.43e-21!25;UBERON:0000203!5.43e-21!25;UBERON:0000924!6.86e-19!173;UBERON:0006601!6.86e-19!173;UBERON:0004121!5.11e-18!169;UBERON:0002308!3.68e-13!9;UBERON:0000125!3.68e-13!9;UBERON:0009663!3.79e-11!7;UBERON:0002420!6.84e-11!9;UBERON:0007245!6.84e-11!9;UBERON:0010009!6.84e-11!9;UBERON:0010011!6.84e-11!9;UBERON:0000454!6.84e-11!9;UBERON:0000025!2.25e-10!194;UBERON:0000200!5.85e-10!6;UBERON:0004111!7.61e-10!241;UBERON:0001872!1.29e-08!5;UBERON:0002298!3.41e-08!8;UBERON:0000064!5.79e-08!219;UBERON:0004732!7.61e-08!13;UBERON:0000369!1.50e-07!4;UBERON:0002435!1.50e-07!4;UBERON:0000204!1.50e-07!4;UBERON:0010082!1.50e-07!4;UBERON:0001871!6.59e-07!7;UBERON:0000475!8.02e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.44e-31;32!UBERON:0001893;2.94e-27;34!UBERON:0002791;1.14e-26;32!UBERON:0002780;2.69e-25;41!UBERON:0001890;2.69e-25;41!UBERON:0003528;9.31e-24;34!UBERON:0002020;9.31e-24;34!UBERON:0002619;5.65e-19;22!UBERON:0000369;9.47e-17;4!UBERON:0002435;9.47e-17;4!UBERON:0000204;9.47e-17;4!UBERON:0000956;1.17e-16;25!UBERON:0000203;1.17e-16;25!UBERON:0009663;1.26e-16;7!UBERON:0001873;2.39e-15;2!UBERON:0001954;2.39e-15;2!UBERON:0003022;2.39e-15;2!UBERON:0002421;2.39e-15;2!UBERON:0002600;2.39e-15;2!UBERON:0000073;1.62e-14;53!UBERON:0002616;1.62e-14;53!UBERON:0000955;2.76e-14;68!UBERON:0001017;3.03e-14;75!UBERON:0000349;1.63e-13;5!UBERON:0002420;5.62e-13;9!UBERON:0000125;5.62e-13;9!UBERON:0007245;5.62e-13;9!UBERON:0002308;5.62e-13;9!UBERON:0010009;5.62e-13;9!UBERON:0010011;5.62e-13;9!UBERON:0000454;5.62e-13;9!UBERON:0001950;6.16e-12;20!UBERON:0001016;3.86e-11;83!UBERON:0001723;1.54e-10;3!UBERON:0001033;1.54e-10;3!UBERON:0005383;1.54e-10;3!UBERON:0005382;1.54e-10;3!UBERON:0002902;1.58e-08;1!UBERON:0001882;1.58e-08;1!UBERON:0002022;1.58e-08;1!UBERON:0002079;1.58e-08;1!UBERON:0003112;1.58e-08;1!UBERON:0000941;1.58e-08;1!UBERON:0001785;1.58e-08;1!UBERON:0002464;1.58e-08;1!UBERON:0004904;1.58e-08;1!UBERON:0011158;1.58e-08;1!UBERON:0001021;1.58e-08;1!UBERON:0009899;1.58e-08;1!UBERON:0007190;1.58e-08;1!UBERON:0003128;1.58e-08;1!UBERON:0005403;1.58e-08;1!UBERON:0001703;1.58e-08;1!UBERON:0002241;1.58e-08;1!UBERON:0007023;9.53e-08;114!UBERON:0002021;7.91e-07;5 | |||
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|short_description=p3@SUSD4 | |||
}} |
Revision as of 03:51, 12 September 2013
Short description: | p3@SUSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SUSD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000271787, ENST00000366877, ENST00000366878, NM_001037175, NM_017982, uc001hny.3, uc001hnz.2, uc010puw.1, uc010pux.1_5end |
EntrezGene: | SUSD4 |
HGNC: | 25470 |
UniProt: | Q5VX72Q5VX71B3KTY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.07e-08 | 1 |
keratoacanthoma | 4.07e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.