FFCP PHASE1:Hg19::chr1:55266834..55266860,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55001|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26067|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000371274_5end|description=CAGE_peak_3_at_TTC22_5end|id=chr1:55266834..55266860,-|ontology_enrichment_celltype=CL:0002076!7.02e-12!43;CL:0002251!1.32e-10!21;CL:0000223!1.10e-08!59|ontology_enrichment_celltype_v019=CL:0002252;1.11e-07;1|ontology_enrichment_celltype_v019_2=CL:0002252,8.51e-08,1|ontology_enrichment_development_v019=UBERON:0009143;2.70e-08;1!UBERON:0001045;1.11e-07;1|ontology_enrichment_disease=DOID:1749!1.60e-08!14|ontology_enrichment_disease_v019=DOID:3151;2.99e-08;1!DOID:3149;2.99e-08;1!DOID:178;1.11e-07;1!DOID:326;1.11e-07;1!DOID:3978;1.11e-07;1!DOID:3394;1.11e-07;1!DOID:5844;1.11e-07;1|ontology_enrichment_disease_v019_2=DOID:3151,2.89e-08,1;DOID:3149,2.89e-08,1;DOID:178,1.26e-07,1;DOID:326,1.26e-07,1;DOID:3978,1.26e-07,1;DOID:3394,1.26e-07,1;DOID:5844,1.26e-07,1|ontology_enrichment_uberon=UBERON:0004119!4.79e-14!169;UBERON:0000925!4.79e-14!169;UBERON:0006595!4.79e-14!169;UBERON:0001007!1.12e-12!155;UBERON:0001555!1.12e-12!155;UBERON:0007026!1.12e-12!155;UBERON:0007023!4.56e-11!115;UBERON:0000161!1.30e-10!35;UBERON:0004921!4.94e-10!129;UBERON:0004185!4.94e-10!129;UBERON:0000166!1.07e-09!21;UBERON:0005409!9.74e-08!35;UBERON:0000077!1.22e-07!130;UBERON:0000165!1.65e-07!28;UBERON:0000930!1.65e-07!28;UBERON:0000160!2.47e-07!27;UBERON:0000059!5.95e-07!11|ontology_enrichment_uberon_v019=UBERON:0000160;6.25e-22;17!UBERON:0004921;5.64e-19;33!UBERON:0005409;6.40e-17;22!UBERON:0002108;1.54e-12;4!UBERON:0001155;1.16e-11;9!UBERON:0001723;5.48e-10;3!UBERON:0001033;5.48e-10;3!UBERON:0001555;7.01e-10;54!UBERON:0001043;8.14e-10;3!UBERON:0000059;1.45e-09;11!UBERON:0000305;1.01e-08;7!UBERON:0002372;4.35e-08;1!UBERON:0005795;4.35e-08;1!UBERON:0001961;4.35e-08;1!UBERON:0001744;4.35e-08;1!UBERON:0001042;4.35e-08;1!UBERON:0001735;4.35e-08;1!UBERON:0001007;5.87e-08;81!UBERON:0001154;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0009854;1.11e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.32e-22,17;UBERON:0005409,5.05e-15,25;UBERON:0002108,1.29e-12,4;UBERON:0001155,8.80e-12,9;UBERON:0001723,5.74e-10,3;UBERON:0001033,5.74e-10,3;UBERON:0010056,5.74e-10,3;UBERON:0001043,6.84e-10,3;UBERON:0009143,6.84e-10,3;UBERON:0000059,1.15e-09,11;UBERON:0004921,1.98e-09,118;UBERON:0000305,1.59e-08,7;UBERON:0004119,2.73e-08,160;UBERON:0000925,2.73e-08,160;UBERON:0006595,2.73e-08,160;UBERON:0001007,2.84e-08,145;UBERON:0001555,2.84e-08,145;UBERON:0007026,2.84e-08,145;UBERON:0002372,4.35e-08,1;UBERON:0001961,4.35e-08,1;UBERON:0001744,4.35e-08,1;UBERON:0001735,4.35e-08,1;UBERON:0004871,1.62e-07,8;UBERON:0001154,1.87e-07,1;UBERON:0001153,1.87e-07,1;UBERON:0001045,1.87e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,2.68507104770311,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.40101294060657,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,1.29151611801369,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,1.43246690842614,0.296964680832639,1.22864280839693,0,0.140669416410513,0,0,0,0.19924798825107,1.10513566212459,1.76352923497993,0,0,0,0,0.716084698702437,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.41827123283581,5.07871706125061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,1.99052386215701,1.94606641907346,4.888241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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26067 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000371274_5end | |||
|description=CAGE_peak_3_at_TTC22_5end | |||
|id=chr1:55266834..55266860,- | |||
|ontology_enrichment_celltype=CL:0002076!7.02e-12!43;CL:0002251!1.32e-10!21;CL:0000223!1.10e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002252;1.11e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,8.51e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.70e-08;1!UBERON:0001045;1.11e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!1.60e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.99e-08;1!DOID:3149;2.99e-08;1!DOID:178;1.11e-07;1!DOID:326;1.11e-07;1!DOID:3978;1.11e-07;1!DOID:3394;1.11e-07;1!DOID:5844;1.11e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.89e-08,1;DOID:3149,2.89e-08,1;DOID:178,1.26e-07,1;DOID:326,1.26e-07,1;DOID:3978,1.26e-07,1;DOID:3394,1.26e-07,1;DOID:5844,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.79e-14!169;UBERON:0000925!4.79e-14!169;UBERON:0006595!4.79e-14!169;UBERON:0001007!1.12e-12!155;UBERON:0001555!1.12e-12!155;UBERON:0007026!1.12e-12!155;UBERON:0007023!4.56e-11!115;UBERON:0000161!1.30e-10!35;UBERON:0004921!4.94e-10!129;UBERON:0004185!4.94e-10!129;UBERON:0000166!1.07e-09!21;UBERON:0005409!9.74e-08!35;UBERON:0000077!1.22e-07!130;UBERON:0000165!1.65e-07!28;UBERON:0000930!1.65e-07!28;UBERON:0000160!2.47e-07!27;UBERON:0000059!5.95e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.25e-22;17!UBERON:0004921;5.64e-19;33!UBERON:0005409;6.40e-17;22!UBERON:0002108;1.54e-12;4!UBERON:0001155;1.16e-11;9!UBERON:0001723;5.48e-10;3!UBERON:0001033;5.48e-10;3!UBERON:0001555;7.01e-10;54!UBERON:0001043;8.14e-10;3!UBERON:0000059;1.45e-09;11!UBERON:0000305;1.01e-08;7!UBERON:0002372;4.35e-08;1!UBERON:0005795;4.35e-08;1!UBERON:0001961;4.35e-08;1!UBERON:0001744;4.35e-08;1!UBERON:0001042;4.35e-08;1!UBERON:0001735;4.35e-08;1!UBERON:0001007;5.87e-08;81!UBERON:0001154;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0009854;1.11e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.32e-22,17;UBERON:0005409,5.05e-15,25;UBERON:0002108,1.29e-12,4;UBERON:0001155,8.80e-12,9;UBERON:0001723,5.74e-10,3;UBERON:0001033,5.74e-10,3;UBERON:0010056,5.74e-10,3;UBERON:0001043,6.84e-10,3;UBERON:0009143,6.84e-10,3;UBERON:0000059,1.15e-09,11;UBERON:0004921,1.98e-09,118;UBERON:0000305,1.59e-08,7;UBERON:0004119,2.73e-08,160;UBERON:0000925,2.73e-08,160;UBERON:0006595,2.73e-08,160;UBERON:0001007,2.84e-08,145;UBERON:0001555,2.84e-08,145;UBERON:0007026,2.84e-08,145;UBERON:0002372,4.35e-08,1;UBERON:0001961,4.35e-08,1;UBERON:0001744,4.35e-08,1;UBERON:0001735,4.35e-08,1;UBERON:0004871,1.62e-07,8;UBERON:0001154,1.87e-07,1;UBERON:0001153,1.87e-07,1;UBERON:0001045,1.87e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,2.68507104770311,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.40101294060657,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,1.29151611801369,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,1.43246690842614,0.296964680832639,1.22864280839693,0,0.140669416410513,0,0,0,0.19924798825107,1.10513566212459,1.76352923497993,0,0,0,0,0.716084698702437,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.41827123283581,5.07871706125061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,1.99052386215701,1.94606641907346,4.888241159469,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.174118413160805,0.34945333648406,0,0,0,0,13.4814732918903,0,1.35588444468319,0,0,0.0633107959558787,1.36885967914362,0.320635281006135,0.640358984218058,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0.449947783103001,1.5476039091159,0.182248669974074,7.71499781478312,0.157611414598396,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0.255524855279191,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0.560544326627578,0.913158720509496,0,0.47775168788705,0.0714765441766563,0,0,0,0,0.62164849248911,0,0.691259661814092,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,5.24784275134024,4.5897507705831,0,0,0,0.196308467114945,0,0,0,0,0,0,0.892769693028288,0.352894871715692,0.0802413666891683,0.730336388246517,0.458729283404541,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0.801652215796681,0.36757959813938,0.752122617877125,0,0,0,0,4.26467963801962,0,0,0,0,0.190941474834495,0,7.40236942849669,2.39563310759697,4.3105313929336,1.93649954560226,0,0,0,0,0.359300808426348,0,0.244482888365733,4.06896178315738,0,0,0 | |||
|short_description=p3@TTC22 | |||
}} |
Revision as of 06:11, 12 September 2013
Short description: | p3@TTC22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TTC22_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000371274_5end |
EntrezGene: | TTC22 |
HGNC: | 26067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 8.51e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.32e-22 | 17 |
gastrointestinal system | 5.05e-15 | 25 |
small intestine | 1.29e-12 | 4 |
colon | 8.80e-12 | 9 |
tongue | 5.74e-10 | 3 |
gustatory system | 5.74e-10 | 3 |
future tongue | 5.74e-10 | 3 |
esophagus | 6.84e-10 | 3 |
esophageal region | 6.84e-10 | 3 |
large intestine | 1.15e-09 | 11 |
subdivision of digestive tract | 1.98e-09 | 118 |
amnion | 1.59e-08 | 7 |
endoderm-derived structure | 2.73e-08 | 160 |
endoderm | 2.73e-08 | 160 |
presumptive endoderm | 2.73e-08 | 160 |
digestive system | 2.84e-08 | 145 |
digestive tract | 2.84e-08 | 145 |
primitive gut | 2.84e-08 | 145 |
tonsil | 4.35e-08 | 1 |
mucosa-associated lymphoid tissue | 4.35e-08 | 1 |
lymphoid tissue | 4.35e-08 | 1 |
tonsillar ring | 4.35e-08 | 1 |
somatic layer of lateral plate mesoderm | 1.62e-07 | 8 |
vermiform appendix | 1.87e-07 | 1 |
caecum | 1.87e-07 | 1 |
midgut | 1.87e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.89e-08 | 1 |
keratoacanthoma | 2.89e-08 | 1 |
vascular disease | 1.26e-07 | 1 |
ischemia | 1.26e-07 | 1 |
extrinsic cardiomyopathy | 1.26e-07 | 1 |
myocardial ischemia | 1.26e-07 | 1 |
myocardial infarction | 1.26e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.