FFCP PHASE1:Hg19::chr22:23523037..23523053,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=613|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1014|TSSclassifier=W|UniProt=A9UF01,E9PGJ4,A9UF04|association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end|description=CAGE_peak_3_at_BCR_5end|id=chr22:23523037..23523053,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002202;7.79e-11;9!CL:0002632;7.79e-11;9!CL:0000307;3.75e-09;3!CL:0002368;2.79e-07;13|ontology_enrichment_celltype_v019_2=CL:0002202,1.41e-10,9;CL:0002632,1.41e-10,9;CL:0000068,1.26e-08,3;CL:0000069,1.26e-08,3;CL:0000307,1.26e-08,3;CL:0000377,1.26e-08,3;CL:0002368,4.11e-07,13|ontology_enrichment_development_v019=CL:0000377;3.75e-09;3!UBERON:0010122;1.28e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!2.20e-12!241;UBERON:0000477!1.55e-11!286;UBERON:0000025!2.20e-10!194;UBERON:0000064!5.55e-09!219;UBERON:0001049!6.55e-08!57;UBERON:0005068!6.55e-08!57;UBERON:0006241!6.55e-08!57;UBERON:0007135!6.55e-08!57;UBERON:0000483!9.44e-08!309;UBERON:0003075!1.00e-07!86;UBERON:0007284!1.00e-07!86;UBERON:0005743!2.66e-07!86;UBERON:0000119!2.88e-07!312;UBERON:0001017!4.43e-07!82;UBERON:0000153!5.92e-07!129;UBERON:0007811!5.92e-07!129;UBERON:0002616!6.31e-07!59;UBERON:0002780!6.66e-07!41;UBERON:0001890!6.66e-07!41;UBERON:0006240!6.66e-07!41;UBERON:0002346!7.46e-07!90;UBERON:0007023!8.34e-07!115|ontology_enrichment_uberon_v019=UBERON:0002420;4.79e-16;9!UBERON:0007245;4.79e-16;9!UBERON:0010009;4.79e-16;9!UBERON:0010011;4.79e-16;9!UBERON:0000454;4.79e-16;9!UBERON:0009663;9.68e-16;7!UBERON:0000369;1.42e-13;4!UBERON:0002435;1.42e-13;4!UBERON:0000204;1.42e-13;4!UBERON:0000125;4.67e-12;9!UBERON:0002308;4.67e-12;9!UBERON:0002791;7.69e-12;32!UBERON:0001869;1.98e-11;32!UBERON:0005383;1.27e-10;3!UBERON:0005382;1.27e-10;3!UBERON:0002780;2.61e-10;41!UBERON:0001890;2.61e-10;41!UBERON:0001893;1.09e-09;34!UBERON:0003528;1.10e-09;34!UBERON:0002020;1.10e-09;34!UBERON:0001873;1.28e-07;2!UBERON:0000073;3.90e-07;53!UBERON:0002616;3.90e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0002420,5.47e-16,9;UBERON:0007245,5.47e-16,9;UBERON:0010009,5.47e-16,9;UBERON:0010011,5.47e-16,9;UBERON:0000454,5.47e-16,9;UBERON:0009663,7.94e-16,7;UBERON:0000369,1.44e-13,4;UBERON:0002435,1.44e-13,4;UBERON:0000204,1.44e-13,4;UBERON:0010082,1.44e-13,4;UBERON:0000125,4.01e-12,9;UBERON:0002308,4.01e-12,9;UBERON:0002791,4.49e-12,32;UBERON:0001869,4.49e-12,32;UBERON:0002780,4.65e-12,41;UBERON:0001890,4.65e-12,41;UBERON:0003080,4.65e-12,41;UBERON:0006240,4.65e-12,41;UBERON:0003528,3.30e-11,34;UBERON:0002020,3.30e-11,34;UBERON:0001893,3.30e-11,34;UBERON:0005383,1.31e-10,3;UBERON:0005382,1.31e-10,3;UBERON:0000025,3.68e-10,192;UBERON:0000073,5.91e-10,53;UBERON:0002616,5.91e-10,53;UBERON:0003056,2.62e-09,61;UBERON:0001049,3.13e-09,56;UBERON:0005068,3.13e-09,56;UBERON:0006241,3.13e-09,56;UBERON:0007135,3.13e-09,56;UBERON:0003075,7.41e-09,82;UBERON:0007284,7.41e-09,82;UBERON:0004111,2.86e-08,240;UBERON:0002346,3.12e-08,86;UBERON:0001873,1.31e-07,2;UBERON:0010122,1.31e-07,2;UBERON:0001017,6.16e-07,81;UBERON:0000955,7.78e-07,68;UBERON:0006238,7.78e-07,68;UBERON:0010371,8.09e-07,104;UBERON:0001875,9.50e-07,2;UBERON:0006514,9.50e-07,2|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,2.09340350391728,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.382067028739756,0.492603536699674,0.472264687882075,0.393364276848904,0,0.309632246632152,0.919421224478927,1.8072355126695,1.10926203050036,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,1.05353633910031,0.983548850569165,1.17903228824749,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.593146252648242,0.535081656179426,0,0.339928028092699,0.766440987203842,1.03088233644789,0.506039384039006,0,1.95325036156926,1.90090408889675,0.602300476311091,0.639933055772092,0,0.710331756132051,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.472674085820339,0,0.263504357079378,0.589405839739707,0.728590576585084,1.48313777113772,0,0,0,0.476981248610684,0.571994910780128,0,0,0.860234595106124,1.38856200643038,1.13061588384802,0.419499436209906,0,1.25396979922086,0.258416759169329,1.42306505074684,0.33472061276467,0.805658634218294,1.52054421143703,0.976248230192678,0.367663080345869,0,0.357198913136319,0.44905874525234,0.675668882899933,0,0.949265659568129,0.732806975721629,0,0,1.74437620857014,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0.1513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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1014 | |||
|TSSclassifier=W | |||
|UniProt=A9UF01,E9PGJ4,A9UF04 | |||
|association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end | |||
|description=CAGE_peak_3_at_BCR_5end | |||
|id=chr22:23523037..23523053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002202;7.79e-11;9!CL:0002632;7.79e-11;9!CL:0000307;3.75e-09;3!CL:0002368;2.79e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.41e-10,9;CL:0002632,1.41e-10,9;CL:0000068,1.26e-08,3;CL:0000069,1.26e-08,3;CL:0000307,1.26e-08,3;CL:0000377,1.26e-08,3;CL:0002368,4.11e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;3.75e-09;3!UBERON:0010122;1.28e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.20e-12!241;UBERON:0000477!1.55e-11!286;UBERON:0000025!2.20e-10!194;UBERON:0000064!5.55e-09!219;UBERON:0001049!6.55e-08!57;UBERON:0005068!6.55e-08!57;UBERON:0006241!6.55e-08!57;UBERON:0007135!6.55e-08!57;UBERON:0000483!9.44e-08!309;UBERON:0003075!1.00e-07!86;UBERON:0007284!1.00e-07!86;UBERON:0005743!2.66e-07!86;UBERON:0000119!2.88e-07!312;UBERON:0001017!4.43e-07!82;UBERON:0000153!5.92e-07!129;UBERON:0007811!5.92e-07!129;UBERON:0002616!6.31e-07!59;UBERON:0002780!6.66e-07!41;UBERON:0001890!6.66e-07!41;UBERON:0006240!6.66e-07!41;UBERON:0002346!7.46e-07!90;UBERON:0007023!8.34e-07!115 | |||
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| |||
|short_description=p3@BCR | |||
}} |
Revision as of 11:09, 12 September 2013
Short description: | p3@BCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BCR_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000290956, ENST00000292697, ENST00000420248_5end |
EntrezGene: | BCR |
HGNC: | 1014 |
UniProt: | A9UF01E9PGJ4A9UF04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.41e-10 | 9 |
epithelial cell of lower respiratory tract | 1.41e-10 | 9 |
duct epithelial cell | 1.26e-08 | 3 |
branched duct epithelial cell | 1.26e-08 | 3 |
tracheal epithelial cell | 1.26e-08 | 3 |
tracheoblast | 1.26e-08 | 3 |
respiratory epithelial cell | 4.11e-07 | 13 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.