FFCP PHASE1:Mm9::chr10:79288751..79288768,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79288751..79288768,+|id=chr10:79288751..79288768,+|ontology_enrichment_celltype=CL:0002563!7.98e-13!9;CL:0002251!7.98e-13!9;CL:0002076!5.25e-12!15;CL:0000066!2.93e-11!25;CL:0000075!5.01e-10!7;CL:0000239!1.85e-09!6;CL:0000677!1.85e-09!6;CL:0000212!1.85e-09!6;CL:0000584!1.85e-09!6;CL:0000223!3.99e-08!20|ontology_enrichment_celltype_v019_2=CL:0002563,2.44e-21,9;CL:0002251,2.44e-21,9;CL:0000239,5.52e-19,6;CL:0000677,5.52e-19,6;CL:0000584,5.52e-19,6;CL:0002076,1.06e-18,15;CL:0000066,2.62e-18,25;CL:0000075,3.51e-16,7;CL:0000223,1.45e-13,20;CL:0000682,3.98e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.80e-21!15;UBERON:0005409!3.22e-20!59;UBERON:0000160!1.29e-19!43;UBERON:0001242!2.90e-18!13;UBERON:0000060!2.90e-18!13;UBERON:0001262!2.90e-18!13;UBERON:0004786!2.90e-18!13;UBERON:0004923!7.38e-13!24;UBERON:0003350!7.98e-13!9;UBERON:0004808!7.98e-13!9;UBERON:0001277!7.98e-13!9;UBERON:0000485!6.27e-12!11;UBERON:0001007!6.63e-08!128;UBERON:0001555!6.63e-08!128;UBERON:0007026!6.63e-08!128;UBERON:0004119!1.31e-07!130;UBERON:0000925!1.31e-07!130;UBERON:0006595!1.31e-07!130;UBERON:0004921!9.20e-07!126;UBERON:0004185!9.20e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.21e-43,31;UBERON:0000344,2.46e-39,15;UBERON:0001242,3.19e-33,13;UBERON:0001262,3.19e-33,13;UBERON:0004786,3.19e-33,13;UBERON:0005409,1.32e-29,47;UBERON:0004923,1.84e-23,24;UBERON:0003350,2.44e-21,9;UBERON:0004808,2.44e-21,9;UBERON:0001277,2.44e-21,9;UBERON:0000485,3.15e-17,11;UBERON:0001007,4.57e-14,116;UBERON:0001555,4.57e-14,116;UBERON:0007026,4.57e-14,116;UBERON:0004119,9.69e-14,118;UBERON:0000925,9.69e-14,118;UBERON:0006595,9.69e-14,118;UBERON:0002108,7.30e-13,4;UBERON:0004921,1.19e-11,114;UBERON:0000331,1.47e-10,3;UBERON:0002116,1.47e-10,3;UBERON:0001204,1.47e-10,3;UBERON:0001168,1.47e-10,3;UBERON:0001962,1.33e-07,2;UBERON:0001961,1.33e-07,2;UBERON:0001744,1.33e-07,2|phase1_expression=0,10.1202868215415,6.82498859084304,4.53696316960245,8.5152274090879,1.84667199103079,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,11.8394392867121,4.5881856213434,3.44539178469012,2.15380998079537,9.48073423817912,10.2612646506442,6.30075324399827,5.09980174507201,0,0,0,2.59966457776147,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,1.58670339998127,0,0,0.38660238396628,0.80673409849337,0.667134131534611,1.71203063501303,0,1.97638745668813,1.25667604400135,1.39269530428806,0.779856348476481,0,2.37751854862164,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.709360934569094,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,1.94422459937689,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr10:79288751..79288768,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:79288751..79288768,+ | |||
|id=chr10:79288751..79288768,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.98e-13!9;CL:0002251!7.98e-13!9;CL:0002076!5.25e-12!15;CL:0000066!2.93e-11!25;CL:0000075!5.01e-10!7;CL:0000239!1.85e-09!6;CL:0000677!1.85e-09!6;CL:0000212!1.85e-09!6;CL:0000584!1.85e-09!6;CL:0000223!3.99e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.44e-21,9;CL:0002251,2.44e-21,9;CL:0000239,5.52e-19,6;CL:0000677,5.52e-19,6;CL:0000584,5.52e-19,6;CL:0002076,1.06e-18,15;CL:0000066,2.62e-18,25;CL:0000075,3.51e-16,7;CL:0000223,1.45e-13,20;CL:0000682,3.98e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.80e-21!15;UBERON:0005409!3.22e-20!59;UBERON:0000160!1.29e-19!43;UBERON:0001242!2.90e-18!13;UBERON:0000060!2.90e-18!13;UBERON:0001262!2.90e-18!13;UBERON:0004786!2.90e-18!13;UBERON:0004923!7.38e-13!24;UBERON:0003350!7.98e-13!9;UBERON:0004808!7.98e-13!9;UBERON:0001277!7.98e-13!9;UBERON:0000485!6.27e-12!11;UBERON:0001007!6.63e-08!128;UBERON:0001555!6.63e-08!128;UBERON:0007026!6.63e-08!128;UBERON:0004119!1.31e-07!130;UBERON:0000925!1.31e-07!130;UBERON:0006595!1.31e-07!130;UBERON:0004921!9.20e-07!126;UBERON:0004185!9.20e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.21e-43,31;UBERON:0000344,2.46e-39,15;UBERON:0001242,3.19e-33,13;UBERON:0001262,3.19e-33,13;UBERON:0004786,3.19e-33,13;UBERON:0005409,1.32e-29,47;UBERON:0004923,1.84e-23,24;UBERON:0003350,2.44e-21,9;UBERON:0004808,2.44e-21,9;UBERON:0001277,2.44e-21,9;UBERON:0000485,3.15e-17,11;UBERON:0001007,4.57e-14,116;UBERON:0001555,4.57e-14,116;UBERON:0007026,4.57e-14,116;UBERON:0004119,9.69e-14,118;UBERON:0000925,9.69e-14,118;UBERON:0006595,9.69e-14,118;UBERON:0002108,7.30e-13,4;UBERON:0004921,1.19e-11,114;UBERON:0000331,1.47e-10,3;UBERON:0002116,1.47e-10,3;UBERON:0001204,1.47e-10,3;UBERON:0001168,1.47e-10,3;UBERON:0001962,1.33e-07,2;UBERON:0001961,1.33e-07,2;UBERON:0001744,1.33e-07,2 | |||
|phase1_expression=0,10.1202868215415,6.82498859084304,4.53696316960245,8.5152274090879,1.84667199103079,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,11.8394392867121,4.5881856213434,3.44539178469012,2.15380998079537,9.48073423817912,10.2612646506442,6.30075324399827,5.09980174507201,0,0,0,2.59966457776147,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,1.58670339998127,0,0,0.38660238396628,0.80673409849337,0.667134131534611,1.71203063501303,0,1.97638745668813,1.25667604400135,1.39269530428806,0.779856348476481,0,2.37751854862164,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.709360934569094,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,1.94422459937689,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:79288751..79288768,+ | |||
}} |
Revision as of 17:31, 12 September 2013
Short description: | p@chr10:79288751..79288768, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79288751..79288768, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.44e-21 | 9 |
epithelial cell of alimentary canal | 2.44e-21 | 9 |
brush border epithelial cell | 5.52e-19 | 6 |
gut absorptive cell | 5.52e-19 | 6 |
enterocyte | 5.52e-19 | 6 |
endo-epithelial cell | 1.06e-18 | 15 |
epithelial cell | 2.62e-18 | 25 |
columnar/cuboidal epithelial cell | 3.51e-16 | 7 |
endodermal cell | 1.45e-13 | 20 |
M cell of gut | 3.98e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.21e-43 | 31 |
mucosa | 2.46e-39 | 15 |
intestinal mucosa | 3.19e-33 | 13 |
wall of intestine | 3.19e-33 | 13 |
gastrointestinal system mucosa | 3.19e-33 | 13 |
gastrointestinal system | 1.32e-29 | 47 |
organ component layer | 1.84e-23 | 24 |
epithelium of mucosa | 2.44e-21 | 9 |
gastrointestinal system epithelium | 2.44e-21 | 9 |
intestinal epithelium | 2.44e-21 | 9 |
simple columnar epithelium | 3.15e-17 | 11 |
digestive system | 4.57e-14 | 116 |
digestive tract | 4.57e-14 | 116 |
primitive gut | 4.57e-14 | 116 |
endoderm-derived structure | 9.69e-14 | 118 |
endoderm | 9.69e-14 | 118 |
presumptive endoderm | 9.69e-14 | 118 |
small intestine | 7.30e-13 | 4 |
subdivision of digestive tract | 1.19e-11 | 114 |
ileal mucosa | 1.47e-10 | 3 |
ileum | 1.47e-10 | 3 |
mucosa of small intestine | 1.47e-10 | 3 |
wall of small intestine | 1.47e-10 | 3 |
gut-associated lymphoid tissue | 1.33e-07 | 2 |
mucosa-associated lymphoid tissue | 1.33e-07 | 2 |
lymphoid tissue | 1.33e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.