FFCP PHASE1:Hg19::chr2:25585680..25585691,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2460|description=CAGE_peak_at_chr2:25585680..25585691,-|id=chr2:25585680..25585691,-|ontology_enrichment_celltype=CL:0000738!2.88e-67!140;CL:0000037!4.32e-58!172;CL:0000566!4.32e-58!172;CL:0000988!8.72e-54!182;CL:0002032!4.18e-52!165;CL:0000837!4.18e-52!165;CL:0002087!1.86e-51!119;CL:0002031!2.62e-51!124;CL:0000766!1.69e-34!76;CL:0002057!1.01e-30!42;CL:0000763!2.83e-29!112;CL:0000049!2.83e-29!112;CL:0000557!3.62e-29!71;CL:0000860!4.07e-28!45;CL:0000839!1.04e-27!70;CL:0002009!2.10e-26!65;CL:0002194!1.66e-25!63;CL:0000576!1.66e-25!63;CL:0000040!1.66e-25!63;CL:0000559!1.66e-25!63;CL:0000838!4.77e-21!52;CL:0000542!1.66e-20!53;CL:0000051!1.66e-20!53;CL:0000134!7.98e-20!358;CL:0002320!4.72e-19!365;CL:0000219!2.44e-16!390;CL:0000048!4.09e-13!430;CL:0000723!1.17e-12!436;CL:0000945!2.80e-12!24;CL:0000826!2.80e-12!24;CL:0000034!4.51e-12!444;CL:0002393!2.62e-08!9;CL:0002397!2.62e-08!9;CL:0000623!2.69e-08!3;CL:0000825!2.69e-08!3;CL:0000451!5.15e-08!10;CL:0000767!7.81e-08!3;CL:0000990!1.94e-07!8;CL:0000094!4.15e-07!8;CL:0000236!5.63e-07!14;CL:0000842!7.10e-07!3;CL:0000453!8.74e-07!5|ontology_enrichment_celltype_v019=CL:0000623;1.22e-20;3!CL:0000767;2.57e-19;3!CL:0000860;5.66e-16;33!CL:0002057;5.66e-16;33!CL:0000766;2.63e-15;69!CL:0000473;3.37e-15;39!CL:0000234;3.37e-15;39!CL:0002087;1.19e-13;104!CL:0000094;1.25e-12;8!CL:0000576;9.27e-12;48!CL:0002393;9.20e-10;6!CL:0002397;9.20e-10;6!CL:0000081;3.18e-09;11!CL:0000763;9.16e-09;100!CL:0000236;5.36e-08;13!CL:0000738;1.12e-07;136!CL:0000542;9.04e-07;53|ontology_enrichment_celltype_v019_2=CL:0000738,9.29e-42,136;CL:0002031,5.10e-33,120;CL:0000037,7.32e-33,168;CL:0002032,3.83e-32,161;CL:0000837,3.83e-32,161;CL:0000988,6.20e-31,177;CL:0000766,3.86e-30,72;CL:0002087,5.36e-29,115;CL:0000557,4.22e-23,67;CL:0000473,1.40e-22,48;CL:0000234,1.40e-22,48;CL:0000860,1.60e-22,42;CL:0002057,1.60e-22,42;CL:0000763,5.19e-21,108;CL:0000049,5.19e-21,108;CL:0000623,1.19e-20,3;CL:0000825,1.19e-20,3;CL:0000839,1.20e-20,66;CL:0002009,1.63e-19,61;CL:0000767,2.42e-19,3;CL:0002194,1.65e-17,59;CL:0000576,1.65e-17,59;CL:0000040,1.65e-17,59;CL:0000559,1.65e-17,59;CL:0000134,8.31e-13,354;CL:0000094,1.20e-12,8;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000838,1.48e-10,52;CL:0000542,2.52e-10,53;CL:0000051,2.52e-10,53;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000081,3.08e-09,11;CL:0000034,3.54e-09,441;CL:0000236,1.59e-07,14|ontology_enrichment_development_v019=CL:0002057;1.34e-16;42!CL:0000051;9.04e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.11e-31!102;UBERON:0003061!7.11e-31!102;UBERON:0002193!2.66e-28!112;UBERON:0002371!2.11e-26!80;UBERON:0001474!8.09e-24!86;UBERON:0002405!1.20e-21!115;UBERON:0004765!6.06e-20!101;UBERON:0001434!6.06e-20!101;UBERON:0002384!5.32e-18!375;UBERON:0003081!2.26e-11!216;UBERON:0002204!3.83e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.40e-20,76;UBERON:0001474,2.69e-18,82;UBERON:0002390,1.01e-16,98;UBERON:0003061,1.01e-16,98;UBERON:0004765,2.20e-16,90;UBERON:0002405,9.48e-16,93;UBERON:0002193,7.52e-15,108;UBERON:0001434,2.04e-14,100;UBERON:0002384,5.75e-12,371;UBERON:0002204,2.60e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.06730766284929,0.629686250509434,1.18009283054671,1.53531759238885,2.78669021968937,0,0,0,0,0,0.587200878669695,1.66198622559563,1.20326668482085,1.30206522429511,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.619412741790207,2.8769239232215,0.256160706529101,0,1.03423704220986,1.29096936716765,1.35426486594342,0,0,0.224723484445085,2.44867113896722,0.320929027076094,1.91801137739712,0,0.398927315243264,0,3.19230162491442,1.13477044938228,0,0.75374599577023,0.521482918420201,0.868755378820466,2.42159801053347,0.368277635987565,2.53169909952708,0,0,0.838634582033504,0,0,0,0.285012743741249,0,0.365328307529268,1.75996244461323,0,0.889509253863555,0.426730222566507,0,0,0,0,7.96898156753228,1.76171156811282,2.29363936875137,0,0,0,0.393419540227666,0.393010762749165,0.616804496998528,0,0.651844533267181,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21767417547206,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,3.93923419527467,0.864719720501769,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2460 | |||
|description=CAGE_peak_at_chr2:25585680..25585691,- | |||
|id=chr2:25585680..25585691,- | |||
|ontology_enrichment_celltype=CL:0000738!2.88e-67!140;CL:0000037!4.32e-58!172;CL:0000566!4.32e-58!172;CL:0000988!8.72e-54!182;CL:0002032!4.18e-52!165;CL:0000837!4.18e-52!165;CL:0002087!1.86e-51!119;CL:0002031!2.62e-51!124;CL:0000766!1.69e-34!76;CL:0002057!1.01e-30!42;CL:0000763!2.83e-29!112;CL:0000049!2.83e-29!112;CL:0000557!3.62e-29!71;CL:0000860!4.07e-28!45;CL:0000839!1.04e-27!70;CL:0002009!2.10e-26!65;CL:0002194!1.66e-25!63;CL:0000576!1.66e-25!63;CL:0000040!1.66e-25!63;CL:0000559!1.66e-25!63;CL:0000838!4.77e-21!52;CL:0000542!1.66e-20!53;CL:0000051!1.66e-20!53;CL:0000134!7.98e-20!358;CL:0002320!4.72e-19!365;CL:0000219!2.44e-16!390;CL:0000048!4.09e-13!430;CL:0000723!1.17e-12!436;CL:0000945!2.80e-12!24;CL:0000826!2.80e-12!24;CL:0000034!4.51e-12!444;CL:0002393!2.62e-08!9;CL:0002397!2.62e-08!9;CL:0000623!2.69e-08!3;CL:0000825!2.69e-08!3;CL:0000451!5.15e-08!10;CL:0000767!7.81e-08!3;CL:0000990!1.94e-07!8;CL:0000094!4.15e-07!8;CL:0000236!5.63e-07!14;CL:0000842!7.10e-07!3;CL:0000453!8.74e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.22e-20;3!CL:0000767;2.57e-19;3!CL:0000860;5.66e-16;33!CL:0002057;5.66e-16;33!CL:0000766;2.63e-15;69!CL:0000473;3.37e-15;39!CL:0000234;3.37e-15;39!CL:0002087;1.19e-13;104!CL:0000094;1.25e-12;8!CL:0000576;9.27e-12;48!CL:0002393;9.20e-10;6!CL:0002397;9.20e-10;6!CL:0000081;3.18e-09;11!CL:0000763;9.16e-09;100!CL:0000236;5.36e-08;13!CL:0000738;1.12e-07;136!CL:0000542;9.04e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.29e-42,136;CL:0002031,5.10e-33,120;CL:0000037,7.32e-33,168;CL:0002032,3.83e-32,161;CL:0000837,3.83e-32,161;CL:0000988,6.20e-31,177;CL:0000766,3.86e-30,72;CL:0002087,5.36e-29,115;CL:0000557,4.22e-23,67;CL:0000473,1.40e-22,48;CL:0000234,1.40e-22,48;CL:0000860,1.60e-22,42;CL:0002057,1.60e-22,42;CL:0000763,5.19e-21,108;CL:0000049,5.19e-21,108;CL:0000623,1.19e-20,3;CL:0000825,1.19e-20,3;CL:0000839,1.20e-20,66;CL:0002009,1.63e-19,61;CL:0000767,2.42e-19,3;CL:0002194,1.65e-17,59;CL:0000576,1.65e-17,59;CL:0000040,1.65e-17,59;CL:0000559,1.65e-17,59;CL:0000134,8.31e-13,354;CL:0000094,1.20e-12,8;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000838,1.48e-10,52;CL:0000542,2.52e-10,53;CL:0000051,2.52e-10,53;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000081,3.08e-09,11;CL:0000034,3.54e-09,441;CL:0000236,1.59e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-16;42!CL:0000051;9.04e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.11e-31!102;UBERON:0003061!7.11e-31!102;UBERON:0002193!2.66e-28!112;UBERON:0002371!2.11e-26!80;UBERON:0001474!8.09e-24!86;UBERON:0002405!1.20e-21!115;UBERON:0004765!6.06e-20!101;UBERON:0001434!6.06e-20!101;UBERON:0002384!5.32e-18!375;UBERON:0003081!2.26e-11!216;UBERON:0002204!3.83e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.40e-20,76;UBERON:0001474,2.69e-18,82;UBERON:0002390,1.01e-16,98;UBERON:0003061,1.01e-16,98;UBERON:0004765,2.20e-16,90;UBERON:0002405,9.48e-16,93;UBERON:0002193,7.52e-15,108;UBERON:0001434,2.04e-14,100;UBERON:0002384,5.75e-12,371;UBERON:0002204,2.60e-07,167 | |||
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|short_description=p@chr2:25585680..25585691,- | |||
}} |
Revision as of 17:59, 12 September 2013
Short description: | p@chr2:25585680..25585691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:25585680..25585691, - |
Coexpression cluster: | C2460_CD19_Natural_Mast_Basophils_CD8_CD14_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.40e-20 | 76 |
bone element | 2.69e-18 | 82 |
hematopoietic system | 1.01e-16 | 98 |
blood island | 1.01e-16 | 98 |
skeletal element | 2.20e-16 | 90 |
immune system | 9.48e-16 | 93 |
hemolymphoid system | 7.52e-15 | 108 |
skeletal system | 2.04e-14 | 100 |
connective tissue | 5.75e-12 | 371 |
musculoskeletal system | 2.60e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.