FFCP PHASE1:Hg19::chr2:63816269..63816288,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4190|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6970|TSSclassifier=S|UniProt=C9JF79,B7Z3I7,F5H098,P40925,B4DUN2|association_with_transcript=0bp_to_ENST00000432309,NM_001199111,NM_001199112_5end|description=CAGE_peak_5_at_MDH1_5end|id=chr2:63816269..63816288,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;4.68e-07;1!CL:0000557;4.68e-07;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;6.63e-11;82!UBERON:0006222;4.68e-07;1!UBERON:0010227;4.68e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.28e-22!57;UBERON:0005068!3.28e-22!57;UBERON:0006241!3.28e-22!57;UBERON:0007135!3.28e-22!57;UBERON:0002616!1.59e-18!59;UBERON:0001869!1.22e-17!32;UBERON:0002020!2.86e-17!34;UBERON:0003528!2.86e-17!34;UBERON:0002780!3.81e-17!41;UBERON:0001890!3.81e-17!41;UBERON:0006240!3.81e-17!41;UBERON:0001893!5.36e-17!34;UBERON:0003080!1.96e-16!42;UBERON:0007023!2.38e-16!115;UBERON:0002791!4.15e-16!33;UBERON:0001017!9.22e-16!82;UBERON:0002619!1.36e-15!22;UBERON:0005743!1.42e-15!86;UBERON:0003075!1.46e-14!86;UBERON:0007284!1.46e-14!86;UBERON:0000073!3.09e-14!94;UBERON:0001016!3.09e-14!94;UBERON:0001950!3.21e-14!20;UBERON:0000955!3.64e-14!69;UBERON:0006238!3.64e-14!69;UBERON:0002346!1.04e-13!90;UBERON:0000956!8.79e-13!25;UBERON:0000203!8.79e-13!25;UBERON:0003056!1.82e-09!61;UBERON:0000200!4.59e-07!6;UBERON:0003076!5.20e-07!15;UBERON:0003057!5.20e-07!15|ontology_enrichment_uberon_v019=UBERON:0003528;2.45e-29;34!UBERON:0002020;2.45e-29;34!UBERON:0001893;2.22e-27;34!UBERON:0001869;2.46e-27;32!UBERON:0001950;8.64e-26;20!UBERON:0000200;4.64e-24;6!UBERON:0002791;6.34e-24;32!UBERON:0002619;2.16e-23;22!UBERON:0000956;1.74e-20;25!UBERON:0000203;1.74e-20;25!UBERON:0002780;9.39e-17;41!UBERON:0001890;9.39e-17;41!UBERON:0000073;1.64e-16;53!UBERON:0002616;1.64e-16;53!UBERON:0000369;8.22e-14;4!UBERON:0002435;8.22e-14;4!UBERON:0000204;8.22e-14;4!UBERON:0001871;1.52e-13;6!UBERON:0001017;1.72e-12;75!UBERON:0002771;1.91e-12;2!UBERON:0000955;2.23e-12;68!UBERON:0001872;6.88e-11;5!UBERON:0001016;7.13e-11;83!UBERON:0002420;9.37e-11;9!UBERON:0007245;9.37e-11;9!UBERON:0010009;9.37e-11;9!UBERON:0010011;9.37e-11;9!UBERON:0000454;9.37e-11;9!UBERON:0000125;1.45e-10;9!UBERON:0002308;1.45e-10;9!UBERON:0000988;7.02e-09;3!UBERON:0001870;7.02e-09;3!UBERON:0005383;7.02e-09;3!UBERON:0005382;7.02e-09;3!UBERON:0007023;8.76e-09;114!UBERON:0009663;4.30e-08;7!UBERON:0002581;4.68e-07;1!UBERON:0001882;4.68e-07;1!UBERON:0002022;4.68e-07;1!UBERON:0002079;4.68e-07;1!UBERON:0001874;4.68e-07;1!UBERON:0003112;4.68e-07;1!UBERON:0002146;4.68e-07;1!UBERON:0001389;4.68e-07;1!UBERON:0000026;4.68e-07;1!UBERON:0008784;4.68e-07;1!UBERON:0006058;4.68e-07;1!UBERON:0003663;4.68e-07;1!UBERON:0004256;4.68e-07;1!UBERON:0011158;4.68e-07;1!UBERON:0004708;4.68e-07;1!UBERON:0002101;4.68e-07;1!UBERON:0004709;4.68e-07;1!UBERON:0005623;4.68e-07;1!UBERON:0002529;4.68e-07;1!UBERON:0010538;4.68e-07;1!UBERON:0003661;4.68e-07;1!UBERON:0010890;4.68e-07;1!UBERON:0002471;4.68e-07;1!UBERON:0001383;4.68e-07;1!UBERON:0010758;4.68e-07;1!UBERON:0010707;4.68e-07;1!UBERON:0007190;4.68e-07;1!UBERON:0000978;4.68e-07;1!UBERON:0002103;4.68e-07;1!UBERON:0001665;4.68e-07;1!UBERON:0003823;4.68e-07;1!UBERON:0003128;4.68e-07;1!UBERON:0005403;4.68e-07;1!UBERON:0000154;4.68e-07;1!UBERON:0010709;4.68e-07;1!UBERON:0001703;4.68e-07;1!UBERON:0002241;4.68e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.63e-31,32;UBERON:0000073,6.25e-31,53;UBERON:0002616,6.25e-31,53;UBERON:0001893,1.51e-29,34;UBERON:0003528,2.83e-29,34;UBERON:0002020,2.83e-29,34;UBERON:0001049,4.25e-29,56;UBERON:0005068,4.25e-29,56;UBERON:0006241,4.25e-29,56;UBERON:0007135,4.25e-29,56;UBERON:0002780,6.04e-28,41;UBERON:0001890,6.04e-28,41;UBERON:0003080,6.04e-28,41;UBERON:0006240,6.04e-28,41;UBERON:0002791,5.90e-27,32;UBERON:0001950,7.69e-26,20;UBERON:0000955,1.01e-25,68;UBERON:0006238,1.01e-25,68;UBERON:0007023,3.69e-24,114;UBERON:0000200,4.72e-24,6;UBERON:0001017,1.49e-23,81;UBERON:0002619,1.94e-23,22;UBERON:0003075,3.57e-21,82;UBERON:0007284,3.57e-21,82;UBERON:0001016,7.88e-21,89;UBERON:0000956,1.58e-20,25;UBERON:0000203,1.58e-20,25;UBERON:0002346,5.17e-20,86;UBERON:0003056,6.55e-18,61;UBERON:0010371,6.97e-16,104;UBERON:0010314,1.01e-14,132;UBERON:0001871,1.50e-13,6;UBERON:0000369,1.52e-13,4;UBERON:0002435,1.52e-13,4;UBERON:0000204,1.52e-13,4;UBERON:0010082,1.52e-13,4;UBERON:0002771,2.72e-12,2;UBERON:0001872,7.29e-11,5;UBERON:0002420,1.28e-10,9;UBERON:0007245,1.28e-10,9;UBERON:0010009,1.28e-10,9;UBERON:0010011,1.28e-10,9;UBERON:0000454,1.28e-10,9;UBERON:0000125,2.97e-10,9;UBERON:0002308,2.97e-10,9;UBERON:0004121,3.41e-10,171;UBERON:0000924,3.41e-10,171;UBERON:0006601,3.41e-10,171;UBERON:0000025,7.03e-10,192;UBERON:0001870,9.09e-09,3;UBERON:0005383,1.19e-08,3;UBERON:0005382,1.19e-08,3;UBERON:0000988,1.34e-08,3;UBERON:0009663,6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4190 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6970 | |||
|TSSclassifier=S | |||
|UniProt=C9JF79,B7Z3I7,F5H098,P40925,B4DUN2 | |||
|association_with_transcript=0bp_to_ENST00000432309,NM_001199111,NM_001199112_5end | |||
|description=CAGE_peak_5_at_MDH1_5end | |||
|id=chr2:63816269..63816288,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;4.68e-07;1!CL:0000557;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.63e-11;82!UBERON:0006222;4.68e-07;1!UBERON:0010227;4.68e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.45e-29;34!UBERON:0002020;2.45e-29;34!UBERON:0001893;2.22e-27;34!UBERON:0001869;2.46e-27;32!UBERON:0001950;8.64e-26;20!UBERON:0000200;4.64e-24;6!UBERON:0002791;6.34e-24;32!UBERON:0002619;2.16e-23;22!UBERON:0000956;1.74e-20;25!UBERON:0000203;1.74e-20;25!UBERON:0002780;9.39e-17;41!UBERON:0001890;9.39e-17;41!UBERON:0000073;1.64e-16;53!UBERON:0002616;1.64e-16;53!UBERON:0000369;8.22e-14;4!UBERON:0002435;8.22e-14;4!UBERON:0000204;8.22e-14;4!UBERON:0001871;1.52e-13;6!UBERON:0001017;1.72e-12;75!UBERON:0002771;1.91e-12;2!UBERON:0000955;2.23e-12;68!UBERON:0001872;6.88e-11;5!UBERON:0001016;7.13e-11;83!UBERON:0002420;9.37e-11;9!UBERON:0007245;9.37e-11;9!UBERON:0010009;9.37e-11;9!UBERON:0010011;9.37e-11;9!UBERON:0000454;9.37e-11;9!UBERON:0000125;1.45e-10;9!UBERON:0002308;1.45e-10;9!UBERON:0000988;7.02e-09;3!UBERON:0001870;7.02e-09;3!UBERON:0005383;7.02e-09;3!UBERON:0005382;7.02e-09;3!UBERON:0007023;8.76e-09;114!UBERON:0009663;4.30e-08;7!UBERON:0002581;4.68e-07;1!UBERON:0001882;4.68e-07;1!UBERON:0002022;4.68e-07;1!UBERON:0002079;4.68e-07;1!UBERON:0001874;4.68e-07;1!UBERON:0003112;4.68e-07;1!UBERON:0002146;4.68e-07;1!UBERON:0001389;4.68e-07;1!UBERON:0000026;4.68e-07;1!UBERON:0008784;4.68e-07;1!UBERON:0006058;4.68e-07;1!UBERON:0003663;4.68e-07;1!UBERON:0004256;4.68e-07;1!UBERON:0011158;4.68e-07;1!UBERON:0004708;4.68e-07;1!UBERON:0002101;4.68e-07;1!UBERON:0004709;4.68e-07;1!UBERON:0005623;4.68e-07;1!UBERON:0002529;4.68e-07;1!UBERON:0010538;4.68e-07;1!UBERON:0003661;4.68e-07;1!UBERON:0010890;4.68e-07;1!UBERON:0002471;4.68e-07;1!UBERON:0001383;4.68e-07;1!UBERON:0010758;4.68e-07;1!UBERON:0010707;4.68e-07;1!UBERON:0007190;4.68e-07;1!UBERON:0000978;4.68e-07;1!UBERON:0002103;4.68e-07;1!UBERON:0001665;4.68e-07;1!UBERON:0003823;4.68e-07;1!UBERON:0003128;4.68e-07;1!UBERON:0005403;4.68e-07;1!UBERON:0000154;4.68e-07;1!UBERON:0010709;4.68e-07;1!UBERON:0001703;4.68e-07;1!UBERON:0002241;4.68e-07;1 | |||
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| |||
|short_description=p5@MDH1 | |||
}} |
Revision as of 19:15, 12 September 2013
Short description: | p5@MDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432309, NM_001199111, NM_001199112_5end |
EntrezGene: | MDH1 |
HGNC: | 6970 |
UniProt: | C9JF79B7Z3I7F5H098P40925B4DUN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.