FFCP PHASE1:Mm9::chr11:33743693..33743713,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70357|HGNC=|MCL_coexpression_id=1510|UniProt=Q9JJ57,Q3YAB6|association_with_transcript=-108bp_to_ENSMUST00000109340,ENSMUST00000166204,NM_001190885,NM_027398,uc007iko.2,uc007ikp.2,uc007ikq.2_5end|description=CAGE_peak_4_at_Kcnip1_5end|id=chr11:33743693..33743713,-|ontology_enrichment_celltype=CL:0000117!1.74e-17!23;CL:0000337!1.74e-17!23;CL:0000540!3.65e-11!33;CL:0000047!3.65e-11!33;CL:0000031!3.65e-11!33;CL:0000404!3.65e-11!33;CL:0002319!3.46e-10!43;CL:0000221!1.01e-09!44;CL:0000133!1.01e-09!44;CL:0000393!4.59e-08!39;CL:0000211!4.59e-08!39;CL:0000055!2.27e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.27e-24,23;CL:0000337,2.27e-24,23;CL:0000540,2.27e-15,33;CL:0000047,2.27e-15,33;CL:0000031,2.27e-15,33;CL:0000404,2.27e-15,33;CL:0002319,6.80e-15,43;CL:0000221,2.03e-14,44;CL:0000133,2.03e-14,44;CL:0000393,3.27e-12,39;CL:0000211,3.27e-12,39;CL:0002321,5.82e-07,70;CL:0002612,9.50e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.37e-36!71;UBERON:0003075!1.37e-36!71;UBERON:0007284!1.37e-36!71;UBERON:0001049!6.42e-30!52;UBERON:0005068!6.42e-30!52;UBERON:0006241!6.42e-30!52;UBERON:0007135!6.42e-30!52;UBERON:0004121!1.29e-29!102;UBERON:0000924!1.29e-29!102;UBERON:0006601!1.29e-29!102;UBERON:0000033!5.92e-29!63;UBERON:0001017!2.19e-28!73;UBERON:0005743!2.19e-28!73;UBERON:0000955!1.11e-27!50;UBERON:0006238!1.11e-27!50;UBERON:0000073!5.28e-27!75;UBERON:0001016!5.28e-27!75;UBERON:0002616!1.15e-26!49;UBERON:0003056!1.42e-26!49;UBERON:0002020!1.88e-24!34;UBERON:0003080!4.09e-22!40;UBERON:0002780!3.73e-21!39;UBERON:0001890!3.73e-21!39;UBERON:0006240!3.73e-21!39;UBERON:0002791!1.27e-19!29;UBERON:0003528!1.27e-19!29;UBERON:0001893!1.27e-19!29;UBERON:0000153!9.14e-16!94;UBERON:0007811!1.25e-15!86;UBERON:0000956!2.33e-13!21;UBERON:0001869!2.33e-13!21;UBERON:0000203!2.33e-13!21;UBERON:0002619!1.38e-11!17;UBERON:0003076!3.67e-08!12;UBERON:0003057!3.67e-08!12;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10;UBERON:0002420!1.61e-07!8;UBERON:0007245!1.61e-07!8;UBERON:0010009!1.61e-07!8;UBERON:0010011!1.61e-07!8;UBERON:0000454!1.61e-07!8;UBERON:0002240!7.51e-07!6;UBERON:0005174!7.51e-07!6;UBERON:0001137!7.51e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.39e-36,54;UBERON:0002346,2.50e-35,64;UBERON:0003075,2.50e-35,64;UBERON:0007284,2.50e-35,64;UBERON:0001017,1.48e-33,73;UBERON:0002020,1.63e-33,34;UBERON:0001049,5.28e-33,52;UBERON:0005068,5.28e-33,52;UBERON:0006241,5.28e-33,52;UBERON:0007135,5.28e-33,52;UBERON:0001016,2.23e-32,75;UBERON:0004121,9.04e-32,95;UBERON:0000924,9.04e-32,95;UBERON:0006601,9.04e-32,95;UBERON:0010371,1.06e-29,73;UBERON:0003056,1.49e-26,49;UBERON:0000955,2.61e-25,47;UBERON:0006238,2.61e-25,47;UBERON:0003528,7.15e-25,29;UBERON:0002791,7.15e-25,29;UBERON:0001893,7.15e-25,29;UBERON:0002616,9.39e-24,46;UBERON:0010314,8.36e-23,92;UBERON:0003080,2.44e-22,40;UBERON:0002780,8.06e-21,39;UBERON:0001890,8.06e-21,39;UBERON:0006240,8.06e-21,39;UBERON:0000956,6.93e-14,21;UBERON:0001869,6.93e-14,21;UBERON:0000203,6.93e-14,21;UBERON:0002619,2.33e-13,17;UBERON:0002420,4.21e-13,8;UBERON:0007245,4.21e-13,8;UBERON:0010009,4.21e-13,8;UBERON:0010011,4.21e-13,8;UBERON:0000454,4.21e-13,8;UBERON:0002240,8.15e-12,6;UBERON:0005174,8.15e-12,6;UBERON:0001137,8.15e-12,6;UBERON:0003076,4.46e-11,12;UBERON:0003057,4.46e-11,12;UBERON:0001948,2.14e-10,5;UBERON:0002315,2.14e-10,5;UBERON:0000025,4.00e-10,114;UBERON:0002021,3.14e-09,10;UBERON:0000411,3.14e-09,10;UBERON:0001950,3.14e-09,10;UBERON:0004111,6.76e-09,122;UBERON:0000369,1.48e-08,5;UBERON:0002435,1.48e-08,5;UBERON:0000204,1.48e-08,5;UBERON:0010082,1.48e-08,5;UBERON:0002950,6.34e-08,4;UBERON:0001891,6.34e-08,4;UBERON:0009616,6.34e-08,4;UBERON:0010286,6.34e-08,4;UBERON:0002257,9.50e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.97717564461025,1.94429899074283,0.55994568650145,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,3.1691570175309,0.677689064138264,0,0,0,0,0,0,0.518448061542388,0.270011876663381,1.68259969081106,3.71346279724945,5.07997644188711,0.734944795289724,0.287536413054709,1.83843757322004,3.30347642998166,2.17068474744819,1.38245879930619,1.84640802822271,2.10421580285542,1.04182674111352,2.51264699101243,3.37657566019008,1.83357897332172,3.24091444021034,3.55929201997757,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.304465478312141,0.691846491768175,0.753613202763113,1.41106448562846,0.376999773989026,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,4.34392854273986,3.20250421973039,2.51308704225729,1.39059456153821,2.30143911597297,3.53239675751252,1.94689515681309,0,0,0,0.420883711772948,0.650602214813519,0,0.180062129805349,1.05493372485001,3.12967896096108,5.63700369253339,4.68508622798644,2.84573707812917,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,1.05144974282064,1.9551876352064,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,4.81981974632711,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.532020700926821,0.535106452806212,0.493647061806363,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,2.03967832211561,0,1.03193433981611,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,2.29158205375759,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,0.453142408984205,1.55328093525546,0.518936737920883,0.399024873401031,0.682934423016537,0.486213434136588,0.838452650511929,0.735374033800057,0.666740183404846,0.412070114477788,0.962757628775446,0.252697211763798,1.2673964994512,0.377252682772152,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0.532427418478012,0.238436189947321,0.436039249896986,1.03520318456864,0.25384382367503,1.09756783723664,0,0.679020569229309,0,0.593175090620871,0.29551344712669,0.409231043169689,0.77468420592983,0.578719832943424,1.74867404556562,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0|short_description=p4@Kcnip1}} | ||
|EntrezGene=70357 | |||
|HGNC= | |||
|MCL_coexpression_id=1510 | |||
|UniProt=Q9JJ57,Q3YAB6 | |||
|association_with_transcript=-108bp_to_ENSMUST00000109340,ENSMUST00000166204,NM_001190885,NM_027398,uc007iko.2,uc007ikp.2,uc007ikq.2_5end | |||
|description=CAGE_peak_4_at_Kcnip1_5end | |||
|id=chr11:33743693..33743713,- | |||
|ontology_enrichment_celltype=CL:0000117!1.74e-17!23;CL:0000337!1.74e-17!23;CL:0000540!3.65e-11!33;CL:0000047!3.65e-11!33;CL:0000031!3.65e-11!33;CL:0000404!3.65e-11!33;CL:0002319!3.46e-10!43;CL:0000221!1.01e-09!44;CL:0000133!1.01e-09!44;CL:0000393!4.59e-08!39;CL:0000211!4.59e-08!39;CL:0000055!2.27e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.27e-24,23;CL:0000337,2.27e-24,23;CL:0000540,2.27e-15,33;CL:0000047,2.27e-15,33;CL:0000031,2.27e-15,33;CL:0000404,2.27e-15,33;CL:0002319,6.80e-15,43;CL:0000221,2.03e-14,44;CL:0000133,2.03e-14,44;CL:0000393,3.27e-12,39;CL:0000211,3.27e-12,39;CL:0002321,5.82e-07,70;CL:0002612,9.50e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.37e-36!71;UBERON:0003075!1.37e-36!71;UBERON:0007284!1.37e-36!71;UBERON:0001049!6.42e-30!52;UBERON:0005068!6.42e-30!52;UBERON:0006241!6.42e-30!52;UBERON:0007135!6.42e-30!52;UBERON:0004121!1.29e-29!102;UBERON:0000924!1.29e-29!102;UBERON:0006601!1.29e-29!102;UBERON:0000033!5.92e-29!63;UBERON:0001017!2.19e-28!73;UBERON:0005743!2.19e-28!73;UBERON:0000955!1.11e-27!50;UBERON:0006238!1.11e-27!50;UBERON:0000073!5.28e-27!75;UBERON:0001016!5.28e-27!75;UBERON:0002616!1.15e-26!49;UBERON:0003056!1.42e-26!49;UBERON:0002020!1.88e-24!34;UBERON:0003080!4.09e-22!40;UBERON:0002780!3.73e-21!39;UBERON:0001890!3.73e-21!39;UBERON:0006240!3.73e-21!39;UBERON:0002791!1.27e-19!29;UBERON:0003528!1.27e-19!29;UBERON:0001893!1.27e-19!29;UBERON:0000153!9.14e-16!94;UBERON:0007811!1.25e-15!86;UBERON:0000956!2.33e-13!21;UBERON:0001869!2.33e-13!21;UBERON:0000203!2.33e-13!21;UBERON:0002619!1.38e-11!17;UBERON:0003076!3.67e-08!12;UBERON:0003057!3.67e-08!12;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10;UBERON:0002420!1.61e-07!8;UBERON:0007245!1.61e-07!8;UBERON:0010009!1.61e-07!8;UBERON:0010011!1.61e-07!8;UBERON:0000454!1.61e-07!8;UBERON:0002240!7.51e-07!6;UBERON:0005174!7.51e-07!6;UBERON:0001137!7.51e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.39e-36,54;UBERON:0002346,2.50e-35,64;UBERON:0003075,2.50e-35,64;UBERON:0007284,2.50e-35,64;UBERON:0001017,1.48e-33,73;UBERON:0002020,1.63e-33,34;UBERON:0001049,5.28e-33,52;UBERON:0005068,5.28e-33,52;UBERON:0006241,5.28e-33,52;UBERON:0007135,5.28e-33,52;UBERON:0001016,2.23e-32,75;UBERON:0004121,9.04e-32,95;UBERON:0000924,9.04e-32,95;UBERON:0006601,9.04e-32,95;UBERON:0010371,1.06e-29,73;UBERON:0003056,1.49e-26,49;UBERON:0000955,2.61e-25,47;UBERON:0006238,2.61e-25,47;UBERON:0003528,7.15e-25,29;UBERON:0002791,7.15e-25,29;UBERON:0001893,7.15e-25,29;UBERON:0002616,9.39e-24,46;UBERON:0010314,8.36e-23,92;UBERON:0003080,2.44e-22,40;UBERON:0002780,8.06e-21,39;UBERON:0001890,8.06e-21,39;UBERON:0006240,8.06e-21,39;UBERON:0000956,6.93e-14,21;UBERON:0001869,6.93e-14,21;UBERON:0000203,6.93e-14,21;UBERON:0002619,2.33e-13,17;UBERON:0002420,4.21e-13,8;UBERON:0007245,4.21e-13,8;UBERON:0010009,4.21e-13,8;UBERON:0010011,4.21e-13,8;UBERON:0000454,4.21e-13,8;UBERON:0002240,8.15e-12,6;UBERON:0005174,8.15e-12,6;UBERON:0001137,8.15e-12,6;UBERON:0003076,4.46e-11,12;UBERON:0003057,4.46e-11,12;UBERON:0001948,2.14e-10,5;UBERON:0002315,2.14e-10,5;UBERON:0000025,4.00e-10,114;UBERON:0002021,3.14e-09,10;UBERON:0000411,3.14e-09,10;UBERON:0001950,3.14e-09,10;UBERON:0004111,6.76e-09,122;UBERON:0000369,1.48e-08,5;UBERON:0002435,1.48e-08,5;UBERON:0000204,1.48e-08,5;UBERON:0010082,1.48e-08,5;UBERON:0002950,6.34e-08,4;UBERON:0001891,6.34e-08,4;UBERON:0009616,6.34e-08,4;UBERON:0010286,6.34e-08,4;UBERON:0002257,9.50e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.97717564461025,1.94429899074283,0.55994568650145,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,3.1691570175309,0.677689064138264,0,0,0,0,0,0,0.518448061542388,0.270011876663381,1.68259969081106,3.71346279724945,5.07997644188711,0.734944795289724,0.287536413054709,1.83843757322004,3.30347642998166,2.17068474744819,1.38245879930619,1.84640802822271,2.10421580285542,1.04182674111352,2.51264699101243,3.37657566019008,1.83357897332172,3.24091444021034,3.55929201997757,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.304465478312141,0.691846491768175,0.753613202763113,1.41106448562846,0.376999773989026,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,4.34392854273986,3.20250421973039,2.51308704225729,1.39059456153821,2.30143911597297,3.53239675751252,1.94689515681309,0,0,0,0.420883711772948,0.650602214813519,0,0.180062129805349,1.05493372485001,3.12967896096108,5.63700369253339,4.68508622798644,2.84573707812917,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,1.05144974282064,1.9551876352064,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,4.81981974632711,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.532020700926821,0.535106452806212,0.493647061806363,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,2.03967832211561,0,1.03193433981611,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,2.29158205375759,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,0.453142408984205,1.55328093525546,0.518936737920883,0.399024873401031,0.682934423016537,0.486213434136588,0.838452650511929,0.735374033800057,0.666740183404846,0.412070114477788,0.962757628775446,0.252697211763798,1.2673964994512,0.377252682772152,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0.532427418478012,0.238436189947321,0.436039249896986,1.03520318456864,0.25384382367503,1.09756783723664,0,0.679020569229309,0,0.593175090620871,0.29551344712669,0.409231043169689,0.77468420592983,0.578719832943424,1.74867404556562,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@Kcnip1 | |||
}} |
Revision as of 19:31, 12 September 2013
Short description: | p4@Kcnip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1510 |
Association with transcript: | -108bp_to_ENSMUST00000109340, ENSMUST00000166204, NM_001190885, NM_027398, uc007iko.2, uc007ikp.2, uc007ikq.2_5end |
EntrezGene: | Kcnip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.27e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.27e-24 | 23 |
neuron | 2.27e-15 | 33 |
neuronal stem cell | 2.27e-15 | 33 |
neuroblast | 2.27e-15 | 33 |
electrically signaling cell | 2.27e-15 | 33 |
neural cell | 6.80e-15 | 43 |
ectodermal cell | 2.03e-14 | 44 |
neurectodermal cell | 2.03e-14 | 44 |
electrically responsive cell | 3.27e-12 | 39 |
electrically active cell | 3.27e-12 | 39 |
embryonic cell | 5.82e-07 | 70 |
neuron of the ventral spinal cord | 9.50e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.