FFCP PHASE1:Mm9::chr11:86171669..86171674,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:86171669..86171674,-|id=chr11:86171669..86171674,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,5.74e-11,1;CL:0002078,5.74e-11,1;CL:0000115,5.74e-11,1;CL:0002262,5.74e-11,1;CL:1000398,5.74e-11,1;CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000020!3.66e-07!12;UBERON:0001032!3.66e-07!12;UBERON:0004456!3.66e-07!12;UBERON:0000970!5.46e-07!9;UBERON:0000019!5.46e-07!9;UBERON:0000047!5.46e-07!9;UBERON:0004088!5.46e-07!9;UBERON:0002104!5.46e-07!9;UBERON:0001456!5.46e-07!9;UBERON:0003072!5.46e-07!9;UBERON:0003071!5.46e-07!9;UBERON:0004128!5.46e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.74e-11,1;UBERON:0001281,5.74e-11,1;UBERON:0000353,5.74e-11,1;UBERON:0003497,5.74e-11,1;UBERON:0003909,5.74e-11,1;UBERON:0003928,5.74e-11,1;UBERON:0003835,5.74e-11,1;UBERON:0003513,5.74e-11,1;UBERON:0001280,5.74e-11,1;UBERON:0004647,5.74e-11,1;UBERON:0002294,5.74e-11,1;UBERON:0001173,5.74e-11,1;UBERON:0004912,5.74e-11,1;UBERON:0005171,5.74e-11,1|phase1_expression=0.320297694209588,0.348975407639361,0,0,1.00179145989269,0,0.467225281191051,0.129123323441576,3.801295498095,6.55380673701582,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0.473193248037357,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0,0.527545150920775,0.274462930807229,0,0.279182999001381,0,0,0.589257170947335,0.142371680799103,0,0.151452386666368,0,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0.648965052271031,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0.689706313300419,0.540186389416048,0.753524089178575,0.95251098811859,1.0249097622788,1.12442069471675,0,1.5089759505299,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0.411618449517138,0.330418782983798,0,0.426576501070468,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0.509935289981566,0.979660166265606,0.690999869022119,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr11:86171669..86171674,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:86171669..86171674,- | |||
|id=chr11:86171669..86171674,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.74e-11,1;CL:0002078,5.74e-11,1;CL:0000115,5.74e-11,1;CL:0002262,5.74e-11,1;CL:1000398,5.74e-11,1;CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!3.66e-07!12;UBERON:0001032!3.66e-07!12;UBERON:0004456!3.66e-07!12;UBERON:0000970!5.46e-07!9;UBERON:0000019!5.46e-07!9;UBERON:0000047!5.46e-07!9;UBERON:0004088!5.46e-07!9;UBERON:0002104!5.46e-07!9;UBERON:0001456!5.46e-07!9;UBERON:0003072!5.46e-07!9;UBERON:0003071!5.46e-07!9;UBERON:0004128!5.46e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.74e-11,1;UBERON:0001281,5.74e-11,1;UBERON:0000353,5.74e-11,1;UBERON:0003497,5.74e-11,1;UBERON:0003909,5.74e-11,1;UBERON:0003928,5.74e-11,1;UBERON:0003835,5.74e-11,1;UBERON:0003513,5.74e-11,1;UBERON:0001280,5.74e-11,1;UBERON:0004647,5.74e-11,1;UBERON:0002294,5.74e-11,1;UBERON:0001173,5.74e-11,1;UBERON:0004912,5.74e-11,1;UBERON:0005171,5.74e-11,1 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,1.00179145989269,0,0.467225281191051,0.129123323441576,3.801295498095,6.55380673701582,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0.473193248037357,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0,0.527545150920775,0.274462930807229,0,0.279182999001381,0,0,0.589257170947335,0.142371680799103,0,0.151452386666368,0,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0.648965052271031,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0.689706313300419,0.540186389416048,0.753524089178575,0.95251098811859,1.0249097622788,1.12442069471675,0,1.5089759505299,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0.411618449517138,0.330418782983798,0,0.426576501070468,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0.509935289981566,0.979660166265606,0.690999869022119,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:86171669..86171674,- | |||
}} |
Revision as of 21:17, 12 September 2013
Short description: | p@chr11:86171669..86171674, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86171669..86171674, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.74e-11 | 1 |
meso-epithelial cell | 5.74e-11 | 1 |
endothelial cell | 5.74e-11 | 1 |
endothelial cell of sinusoid | 5.74e-11 | 1 |
endothelial cell of hepatic sinusoid | 5.74e-11 | 1 |
thymocyte | 1.12e-07 | 6 |
double negative thymocyte | 1.12e-07 | 6 |
naive T cell | 1.12e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.12e-07 | 6 |
DN4 thymocyte | 1.12e-07 | 6 |
DN1 thymic pro-T cell | 1.12e-07 | 6 |
DN2 thymocyte | 1.12e-07 | 6 |
DN3 thymocyte | 1.12e-07 | 6 |
immature single positive thymocyte | 1.12e-07 | 6 |
early T lineage precursor | 1.12e-07 | 6 |
mature CD4 single-positive thymocyte | 1.12e-07 | 6 |
resting double-positive thymocyte | 1.12e-07 | 6 |
double-positive blast | 1.12e-07 | 6 |
CD69-positive double-positive thymocyte | 1.12e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.12e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.12e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.74e-11 | 1 |
hepatic sinusoid | 5.74e-11 | 1 |
parenchyma | 5.74e-11 | 1 |
abdomen blood vessel | 5.74e-11 | 1 |
sinusoid | 5.74e-11 | 1 |
digestive system duct | 5.74e-11 | 1 |
abdominal segment blood vessel | 5.74e-11 | 1 |
trunk blood vessel | 5.74e-11 | 1 |
liver parenchyma | 5.74e-11 | 1 |
liver lobule | 5.74e-11 | 1 |
biliary system | 5.74e-11 | 1 |
biliary tree | 5.74e-11 | 1 |
biliary bud | 5.74e-11 | 1 |
hepatic duct | 5.74e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.