FFCP PHASE1:Hg19::chr3:134075540..134075552,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51421|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=26015,17812|TSSclassifier=N|UniProt=|association_with_transcript=-137bp_to_ENST00000273411,uc010htx.1_5end|description=CAGE_peak_11_at_AMOTL2_5end,CAGE_peak_3_at_RPL39P5_5end|id=chr3:134075540..134075552,-|ontology_enrichment_celltype=CL:0000055!5.48e-11!180;CL:0000057!3.12e-09!75;CL:0002620!5.80e-08!23;CL:0000499!2.16e-07!27;CL:0000220!3.78e-07!246;CL:0002321!4.17e-07!248;CL:0000066!8.42e-07!254|ontology_enrichment_celltype_v019=CL:0002559;2.14e-12;5!CL:0000346;8.49e-10;3!CL:1000428;8.49e-10;3!CL:0002541;1.56e-09;3!CL:0002581;9.07e-08;1!CL:0000327;3.03e-07;15!CL:0000153;3.04e-07;9!CL:0000447;3.04e-07;9|ontology_enrichment_celltype_v019_2=CL:0002559,1.24e-12,5;CL:0000346,7.81e-10,3;CL:1000428,7.81e-10,3;CL:0002541,2.41e-09,3;CL:0002581,6.10e-08,1;CL:0000327,2.35e-07,15;CL:0000153,2.39e-07,9;CL:0000447,2.39e-07,9|ontology_enrichment_development_v019=UBERON:0003099;9.07e-08;1!UBERON:0003852;9.07e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:178;9.07e-08;1!DOID:326;9.07e-08;1!DOID:3978;9.07e-08;1!DOID:3394;9.07e-08;1!DOID:5844;9.07e-08;1!DOID:3112;9.07e-08;1|ontology_enrichment_disease_v019_2=DOID:178,4.99e-08,1;DOID:326,4.99e-08,1;DOID:3978,4.99e-08,1;DOID:3394,4.99e-08,1;DOID:5844,4.99e-08,1;DOID:3112,6.52e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002073;2.14e-12;5!UBERON:0000412;8.49e-10;3!UBERON:0001992;8.49e-10;3!UBERON:0003124;1.56e-09;3!UBERON:0000920;1.56e-09;3!UBERON:0005705;9.07e-08;1!UBERON:0008193;9.07e-08;1!UBERON:0010912;9.07e-08;1!UBERON:0002514;9.07e-08;1!UBERON:0003457;9.07e-08;1!UBERON:0008907;9.07e-08;1!UBERON:0008001;9.07e-08;1!UBERON:0007213;9.07e-08;1!UBERON:0009891;9.07e-08;1!UBERON:0007914;9.07e-08;1!UBERON:0007375;9.07e-08;1!UBERON:0003323;9.07e-08;1!UBERON:0010258;9.07e-08;1!UBERON:0005253;9.07e-08;1!UBERON:0007842;9.07e-08;1!UBERON:0002397;9.07e-08;1!UBERON:0003113;9.07e-08;1!UBERON:0003277;9.07e-08;1!UBERON:0001709;9.07e-08;1!UBERON:0002244;9.07e-08;1!UBERON:0005620;9.07e-08;1!UBERON:0010364;9.07e-08;1!UBERON:0004288;9.07e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.24e-12,5;UBERON:0005086,1.24e-12,5;UBERON:0000412,7.81e-10,3;UBERON:0001992,7.81e-10,3;UBERON:0000920,2.41e-09,3;UBERON:0003124,7.94e-09,7;UBERON:0005705,1.54e-07,1;UBERON:0008193,1.54e-07,1;UBERON:0010912,1.54e-07,1;UBERON:0002514,1.54e-07,1;UBERON:0003457,1.54e-07,1;UBERON:0008907,1.54e-07,1;UBERON:0008001,1.54e-07,1;UBERON:0007213,1.54e-07,1;UBERON:0009891,1.54e-07,1;UBERON:0007914,1.54e-07,1;UBERON:0009292,1.54e-07,1;UBERON:0003099,1.54e-07,1;UBERON:0007375,1.54e-07,1;UBERON:0003323,1.54e-07,1;UBERON:0010258,1.54e-07,1;UBERON:0007842,1.54e-07,1;UBERON:0009494,1.54e-07,1;UBERON:0010042,1.54e-07,1;UBERON:0010045,1.54e-07,1;UBERON:0010259,1.54e-07,1;UBERON:0010359,1.54e-07,1;UBERON:0009526,1.54e-07,1;UBERON:0002397,1.54e-07,1;UBERON:0003113,1.54e-07,1;UBERON:0003277,1.54e-07,1;UBERON:0001709,1.54e-07,1;UBERON:0004066,1.54e-07,1;UBERON:0002244,1.54e-07,1;UBERON:0005620,1.54e-07,1;UBERON:0004362,1.54e-07,1;UBERON:0010364,1.54e-07,1;UBERON:0010046,1.54e-07,1;UBERON:0005868,1.54e-07,1;UBERON:0007238,1.54e-07,1;UBERON:0004288,1.54e-07,1;UBERON:0004068,1.54e-07,1;UBERON:0010334,1.54e-07,1;UBERON:0003852,1.54e-07,1;UBERON:0010253,1.54e-07,1|phase1_expression=0.726713517082227,1.2846031433459,0.281908808191942,0,0,0.872338524100369,0,0,0.522371256399677,0.491467873003018,0,0.218441372130172,0.263766978228454,0.495065411840187,0.662794751455832,1.34465029290355,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,2.50668955317945,1.73815822752988,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0.872188104285069,0,0.25326102332916,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.485618833104395,0,0.204154171254893,0,0,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.612975591598039,0.150238058906597,0.567160915800105,0.717558542755448,0.85422955527427,0.847727604638247,1.20036438433761,0.206105058476878,0.257640540045629,0.744467425326359,0.675105328965065,0.487185025805993,1.00973509697646,0.276149695926898,0.323292113637624,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0.286804595389004,0,0.132529768321485,0.232387885739037,0,0,0,0,2.57296375277154,1.38134921352481,1.85747171212792,0,0,0.168584690078102,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26015,17812 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-137bp_to_ENST00000273411,uc010htx.1_5end | |||
|description=CAGE_peak_11_at_AMOTL2_5end,CAGE_peak_3_at_RPL39P5_5end | |||
|id=chr3:134075540..134075552,- | |||
|ontology_enrichment_celltype=CL:0000055!5.48e-11!180;CL:0000057!3.12e-09!75;CL:0002620!5.80e-08!23;CL:0000499!2.16e-07!27;CL:0000220!3.78e-07!246;CL:0002321!4.17e-07!248;CL:0000066!8.42e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002559;2.14e-12;5!CL:0000346;8.49e-10;3!CL:1000428;8.49e-10;3!CL:0002541;1.56e-09;3!CL:0002581;9.07e-08;1!CL:0000327;3.03e-07;15!CL:0000153;3.04e-07;9!CL:0000447;3.04e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.24e-12,5;CL:0000346,7.81e-10,3;CL:1000428,7.81e-10,3;CL:0002541,2.41e-09,3;CL:0002581,6.10e-08,1;CL:0000327,2.35e-07,15;CL:0000153,2.39e-07,9;CL:0000447,2.39e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.07e-08;1!UBERON:0003852;9.07e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;9.07e-08;1!DOID:326;9.07e-08;1!DOID:3978;9.07e-08;1!DOID:3394;9.07e-08;1!DOID:5844;9.07e-08;1!DOID:3112;9.07e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,4.99e-08,1;DOID:326,4.99e-08,1;DOID:3978,4.99e-08,1;DOID:3394,4.99e-08,1;DOID:5844,4.99e-08,1;DOID:3112,6.52e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;2.14e-12;5!UBERON:0000412;8.49e-10;3!UBERON:0001992;8.49e-10;3!UBERON:0003124;1.56e-09;3!UBERON:0000920;1.56e-09;3!UBERON:0005705;9.07e-08;1!UBERON:0008193;9.07e-08;1!UBERON:0010912;9.07e-08;1!UBERON:0002514;9.07e-08;1!UBERON:0003457;9.07e-08;1!UBERON:0008907;9.07e-08;1!UBERON:0008001;9.07e-08;1!UBERON:0007213;9.07e-08;1!UBERON:0009891;9.07e-08;1!UBERON:0007914;9.07e-08;1!UBERON:0007375;9.07e-08;1!UBERON:0003323;9.07e-08;1!UBERON:0010258;9.07e-08;1!UBERON:0005253;9.07e-08;1!UBERON:0007842;9.07e-08;1!UBERON:0002397;9.07e-08;1!UBERON:0003113;9.07e-08;1!UBERON:0003277;9.07e-08;1!UBERON:0001709;9.07e-08;1!UBERON:0002244;9.07e-08;1!UBERON:0005620;9.07e-08;1!UBERON:0010364;9.07e-08;1!UBERON:0004288;9.07e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.24e-12,5;UBERON:0005086,1.24e-12,5;UBERON:0000412,7.81e-10,3;UBERON:0001992,7.81e-10,3;UBERON:0000920,2.41e-09,3;UBERON:0003124,7.94e-09,7;UBERON:0005705,1.54e-07,1;UBERON:0008193,1.54e-07,1;UBERON:0010912,1.54e-07,1;UBERON:0002514,1.54e-07,1;UBERON:0003457,1.54e-07,1;UBERON:0008907,1.54e-07,1;UBERON:0008001,1.54e-07,1;UBERON:0007213,1.54e-07,1;UBERON:0009891,1.54e-07,1;UBERON:0007914,1.54e-07,1;UBERON:0009292,1.54e-07,1;UBERON:0003099,1.54e-07,1;UBERON:0007375,1.54e-07,1;UBERON:0003323,1.54e-07,1;UBERON:0010258,1.54e-07,1;UBERON:0007842,1.54e-07,1;UBERON:0009494,1.54e-07,1;UBERON:0010042,1.54e-07,1;UBERON:0010045,1.54e-07,1;UBERON:0010259,1.54e-07,1;UBERON:0010359,1.54e-07,1;UBERON:0009526,1.54e-07,1;UBERON:0002397,1.54e-07,1;UBERON:0003113,1.54e-07,1;UBERON:0003277,1.54e-07,1;UBERON:0001709,1.54e-07,1;UBERON:0004066,1.54e-07,1;UBERON:0002244,1.54e-07,1;UBERON:0005620,1.54e-07,1;UBERON:0004362,1.54e-07,1;UBERON:0010364,1.54e-07,1;UBERON:0010046,1.54e-07,1;UBERON:0005868,1.54e-07,1;UBERON:0007238,1.54e-07,1;UBERON:0004288,1.54e-07,1;UBERON:0004068,1.54e-07,1;UBERON:0010334,1.54e-07,1;UBERON:0003852,1.54e-07,1;UBERON:0010253,1.54e-07,1 | |||
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| |||
|short_description=p11@AMOTL2,p3@RPL39P5 | |||
}} |
Revision as of 21:39, 12 September 2013
Short description: | p11@AMOTL2, p3@RPL39P5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_AMOTL2_5end, CAGE_peak_3_at_RPL39P5_5end |
Coexpression cluster: | NA |
Association with transcript: | -137bp_to_ENST00000273411, uc010htx.1_5end |
EntrezGene: | AMOTL2 |
HGNC: | 17812&submit=Submit 26015, 17812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.24e-12 | 5 |
hair follicle dermal papilla cell | 7.81e-10 | 3 |
stem cell of epidermis | 7.81e-10 | 3 |
chorionic membrane mesenchymal stem cell | 2.41e-09 | 3 |
perirenal preadipocyte | 6.10e-08 | 1 |
extracellular matrix secreting cell | 2.35e-07 | 15 |
GAG secreting cell | 2.39e-07 | 9 |
carbohydrate secreting cell | 2.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.99e-08 | 1 |
ischemia | 4.99e-08 | 1 |
extrinsic cardiomyopathy | 4.99e-08 | 1 |
myocardial ischemia | 4.99e-08 | 1 |
myocardial infarction | 4.99e-08 | 1 |
papillary adenocarcinoma | 6.52e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.