FFCP PHASE1:Hg19::chr3:195447845..195447855,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200958|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23282|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000480350_5end|description=CAGE_peak_1_at_MUC20_5end|id=chr3:195447845..195447855,+|ontology_enrichment_celltype=CL:0002076!4.15e-13!43;CL:0000223!6.45e-10!59;CL:0000066!2.15e-08!254|ontology_enrichment_celltype_v019=CL:1000507;3.55e-10;10!CL:1000494;3.55e-10;10!CL:1000415;2.96e-07;2|ontology_enrichment_celltype_v019_2=CL:1000507,3.27e-10,10;CL:1000494,3.27e-10,10;CL:1000415,3.00e-07,2|ontology_enrichment_development_v019=UBERON:0006595;8.62e-08;86|ontology_enrichment_disease=DOID:305!1.55e-09!106;DOID:1749!3.76e-08!14;DOID:299!2.36e-07!25|ontology_enrichment_disease_v019=DOID:299;7.61e-08;25|ontology_enrichment_disease_v019_2=DOID:305,1.44e-08,106;DOID:299,8.49e-08,25|ontology_enrichment_uberon=UBERON:0004119!8.76e-23!169;UBERON:0000925!8.76e-23!169;UBERON:0006595!8.76e-23!169;UBERON:0001007!4.28e-20!155;UBERON:0001555!4.28e-20!155;UBERON:0007026!4.28e-20!155;UBERON:0004921!7.11e-16!129;UBERON:0004185!7.11e-16!129;UBERON:0000464!1.69e-13!104;UBERON:0000466!1.96e-13!126;UBERON:0000077!2.57e-13!130;UBERON:0001004!6.28e-13!72;UBERON:0007023!7.52e-11!115;UBERON:0000161!4.82e-10!35;UBERON:0000058!5.32e-10!26;UBERON:0005911!5.74e-10!82;UBERON:0002294!8.46e-10!7;UBERON:0001173!8.46e-10!7;UBERON:0004912!8.46e-10!7;UBERON:0000065!4.06e-09!53;UBERON:0005177!9.42e-09!107;UBERON:0003064!1.32e-08!37;UBERON:0001008!2.31e-08!45;UBERON:0002553!3.10e-08!70;UBERON:0000481!6.24e-08!347;UBERON:0001041!7.71e-08!98;UBERON:0006554!1.67e-07!44;UBERON:0005156!2.24e-07!59;UBERON:0000990!2.24e-07!59;UBERON:0003104!6.56e-07!238;UBERON:0009142!6.56e-07!238;UBERON:0000166!6.67e-07!21|ontology_enrichment_uberon_v019=UBERON:0002294;1.14e-15;7!UBERON:0001173;1.14e-15;7!UBERON:0004211;3.55e-10;10!UBERON:0009773;3.55e-10;10!UBERON:0001231;3.55e-10;10!UBERON:0004810;3.55e-10;10!UBERON:0004921;3.88e-10;33!UBERON:0002110;8.72e-10;3!UBERON:0000059;1.13e-08;11!UBERON:0002394;7.71e-08;4!UBERON:0003928;7.71e-08;4!UBERON:0003127;2.22e-07;2!UBERON:0006562;2.50e-07;2!UBERON:0000058;3.13e-07;10!UBERON:0000160;7.20e-07;17!UBERON:0000341;8.09e-07;2!UBERON:0005177;9.96e-07;99|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-13,160;UBERON:0000925,1.29e-13,160;UBERON:0006595,1.29e-13,160;UBERON:0001007,1.04e-12,145;UBERON:0001555,1.04e-12,145;UBERON:0007026,1.04e-12,145;UBERON:0004921,1.42e-12,118;UBERON:0002294,5.55e-12,9;UBERON:0001173,5.55e-12,9;UBERON:0004912,5.55e-12,9;UBERON:0005177,2.65e-11,101;UBERON:0004810,3.27e-10,10;UBERON:0002110,9.26e-10,3;UBERON:0006242,9.26e-10,3;UBERON:0000059,1.16e-08,11;UBERON:0003127,2.22e-07,2;UBERON:0007023,3.25e-07,114;UBERON:0001041,4.10e-07,87;UBERON:0009569,6.94e-07,112;UBERON:0000341,7.31e-07,2;UBERON:0000160,7.35e-07,17;UBERON:0001004,8.56e-07,74|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.272746120590835,0.573609190778008,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,2.94659164594868,0,0,0,19.4015833550187,22.6425091086979,0,1.46139224653261,3.9054102690364,0,0,0,0,0,0,6.88165937221603,3.3243040357149,0.223874754722178,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.960950336825531,2.93509238737543,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,0,1.88287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.47748896947538,2.07875276582847,0,0,0,0,0,0,2.39097585901284,1.10513566212459,0,0,0,0,9.43617687046932,29.1804514721243,0,4.24166644238815,0,0,0,0,0,0,0,0,0.910347586283997,2.2882828526349,0,0,0,0,0,0,0,0.110579259931225,0,0,0,4.60098356119391,2.77020930613669,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,4.40728582029699,0,0,5.97157158647103,1.32686346755009,36.0507785510839,0,0,0,0,0,0,0,5.47860933009851,0,1.57833761139756,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,14.796852009571,0.435296032902013,0.34945333648406,0,0,0,0,6.59525312121252,0,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=200958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23282 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000480350_5end | |||
|description=CAGE_peak_1_at_MUC20_5end | |||
|id=chr3:195447845..195447855,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.15e-13!43;CL:0000223!6.45e-10!59;CL:0000066!2.15e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.55e-10;10!CL:1000494;3.55e-10;10!CL:1000415;2.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.27e-10,10;CL:1000494,3.27e-10,10;CL:1000415,3.00e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006595;8.62e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.55e-09!106;DOID:1749!3.76e-08!14;DOID:299!2.36e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.61e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-08,106;DOID:299,8.49e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.76e-23!169;UBERON:0000925!8.76e-23!169;UBERON:0006595!8.76e-23!169;UBERON:0001007!4.28e-20!155;UBERON:0001555!4.28e-20!155;UBERON:0007026!4.28e-20!155;UBERON:0004921!7.11e-16!129;UBERON:0004185!7.11e-16!129;UBERON:0000464!1.69e-13!104;UBERON:0000466!1.96e-13!126;UBERON:0000077!2.57e-13!130;UBERON:0001004!6.28e-13!72;UBERON:0007023!7.52e-11!115;UBERON:0000161!4.82e-10!35;UBERON:0000058!5.32e-10!26;UBERON:0005911!5.74e-10!82;UBERON:0002294!8.46e-10!7;UBERON:0001173!8.46e-10!7;UBERON:0004912!8.46e-10!7;UBERON:0000065!4.06e-09!53;UBERON:0005177!9.42e-09!107;UBERON:0003064!1.32e-08!37;UBERON:0001008!2.31e-08!45;UBERON:0002553!3.10e-08!70;UBERON:0000481!6.24e-08!347;UBERON:0001041!7.71e-08!98;UBERON:0006554!1.67e-07!44;UBERON:0005156!2.24e-07!59;UBERON:0000990!2.24e-07!59;UBERON:0003104!6.56e-07!238;UBERON:0009142!6.56e-07!238;UBERON:0000166!6.67e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.14e-15;7!UBERON:0001173;1.14e-15;7!UBERON:0004211;3.55e-10;10!UBERON:0009773;3.55e-10;10!UBERON:0001231;3.55e-10;10!UBERON:0004810;3.55e-10;10!UBERON:0004921;3.88e-10;33!UBERON:0002110;8.72e-10;3!UBERON:0000059;1.13e-08;11!UBERON:0002394;7.71e-08;4!UBERON:0003928;7.71e-08;4!UBERON:0003127;2.22e-07;2!UBERON:0006562;2.50e-07;2!UBERON:0000058;3.13e-07;10!UBERON:0000160;7.20e-07;17!UBERON:0000341;8.09e-07;2!UBERON:0005177;9.96e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-13,160;UBERON:0000925,1.29e-13,160;UBERON:0006595,1.29e-13,160;UBERON:0001007,1.04e-12,145;UBERON:0001555,1.04e-12,145;UBERON:0007026,1.04e-12,145;UBERON:0004921,1.42e-12,118;UBERON:0002294,5.55e-12,9;UBERON:0001173,5.55e-12,9;UBERON:0004912,5.55e-12,9;UBERON:0005177,2.65e-11,101;UBERON:0004810,3.27e-10,10;UBERON:0002110,9.26e-10,3;UBERON:0006242,9.26e-10,3;UBERON:0000059,1.16e-08,11;UBERON:0003127,2.22e-07,2;UBERON:0007023,3.25e-07,114;UBERON:0001041,4.10e-07,87;UBERON:0009569,6.94e-07,112;UBERON:0000341,7.31e-07,2;UBERON:0000160,7.35e-07,17;UBERON:0001004,8.56e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.272746120590835,0.573609190778008,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,2.94659164594868,0,0,0,19.4015833550187,22.6425091086979,0,1.46139224653261,3.9054102690364,0,0,0,0,0,0,6.88165937221603,3.3243040357149,0.223874754722178,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.960950336825531,2.93509238737543,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,0,1.88287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.47748896947538,2.07875276582847,0,0,0,0,0,0,2.39097585901284,1.10513566212459,0,0,0,0,9.43617687046932,29.1804514721243,0,4.24166644238815,0,0,0,0,0,0,0,0,0.910347586283997,2.2882828526349,0,0,0,0,0,0,0,0.110579259931225,0,0,0,4.60098356119391,2.77020930613669,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,4.40728582029699,0,0,5.97157158647103,1.32686346755009,36.0507785510839,0,0,0,0,0,0,0,5.47860933009851,0,1.57833761139756,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,14.796852009571,0.435296032902013,0.34945333648406,0,0,0,0,6.59525312121252,0,10.3951140759045,0,0,0,16.0352133842538,5.77143505811043,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,1.59743200399193,0,0,0.134366944973453,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8996618021789,6.13718681179478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,16.9155605356001,2.24253566392159,0.471612915298998,2.07119527673598,0,0,0.121792598380896,28.087015341888,0,0,0,0,4.55456879125679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39592431755195,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.353909170043221,0.733714394086716,0,0,0,0,1.72983755203292,0,3.12605604493237,0,0,15.2291768803557,0,0,0,0,0,3.28954660114309,2.97726707033577,0,19.8031762841373,0,0,0,0.455324382702595,3.81420191699347,0,0,0,0,0,0.111231401892069,0.941917114206168,0,1.68163297988273,4.56579360254748,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,7.56052666195365,0,0,2.01339777236026,2.84635677484205,3.04794812455674,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0,1.05673990496671,0.385870790539723,0,0.470317296361523,0.490296643507811,0,0,0,0,0,0,0,0,2.14264726326789,0,1.28386186702669,0.730336388246517,1.83491713361816,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,8.31612529413825,2.85677317756488,0.452122368852043,0.931120714437869,0,0.0636471582781649,0.202117188958219,0.435433495793923,4.10679961302337,6.66785324844416,14.846496516284,11.3104521225645,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,9.98635161278269,0.402547587182052,0 | |||
|short_description=p1@MUC20 | |||
}} |
Revision as of 23:30, 12 September 2013
Short description: | p1@MUC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MUC20_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000480350_5end |
EntrezGene: | MUC20 |
HGNC: | 23282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.27e-10 | 10 |
nephron tubule epithelial cell | 3.27e-10 | 10 |
epithelial cell of gall bladder | 3.00e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.29e-13 | 160 |
endoderm | 1.29e-13 | 160 |
presumptive endoderm | 1.29e-13 | 160 |
digestive system | 1.04e-12 | 145 |
digestive tract | 1.04e-12 | 145 |
primitive gut | 1.04e-12 | 145 |
subdivision of digestive tract | 1.42e-12 | 118 |
biliary system | 5.55e-12 | 9 |
biliary tree | 5.55e-12 | 9 |
biliary bud | 5.55e-12 | 9 |
trunk region element | 2.65e-11 | 101 |
nephron tubule epithelium | 3.27e-10 | 10 |
gallbladder | 9.26e-10 | 3 |
gall bladder primordium | 9.26e-10 | 3 |
large intestine | 1.16e-08 | 11 |
open tracheal system trachea | 2.22e-07 | 2 |
adult organism | 3.25e-07 | 114 |
foregut | 4.10e-07 | 87 |
subdivision of trunk | 6.94e-07 | 112 |
throat | 7.31e-07 | 2 |
intestine | 7.35e-07 | 17 |
respiratory system | 8.56e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-08 | 106 |
adenocarcinoma | 8.49e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.