FFCP PHASE1:Hg19::chr3:196065248..196065267,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116211|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25167|TSSclassifier=S|UniProt=Q96DZ7,C9JCD5|association_with_transcript=0bp_to_ENST00000273695,ENST00000446879,uc003fwj.2,uc003fwl.1,uc010iad.1,uc011btv.1_5end|coexpression_cluster_id=C166|description=CAGE_peak_1_at_TM4SF19_5end|id=chr3:196065248..196065267,-|ontology_enrichment_celltype=CL:0002194!1.18e-29!63;CL:0000576!1.18e-29!63;CL:0000040!1.18e-29!63;CL:0000559!1.18e-29!63;CL:0002009!3.36e-29!65;CL:0000557!5.68e-25!71;CL:0000839!1.24e-24!70;CL:0000766!2.02e-24!76;CL:0000860!4.45e-22!45;CL:0002057!2.06e-21!42;CL:0000763!1.71e-14!112;CL:0000049!1.71e-14!112;CL:0002087!1.03e-10!119;CL:0002031!1.22e-09!124;CL:0000063!1.32e-09!578;CL:0000738!2.04e-08!140;CL:0000066!7.20e-08!254;CL:0000235!7.38e-07!10|ontology_enrichment_celltype_v019=CL:0000473;1.10e-41;39!CL:0000234;1.10e-41;39!CL:0000860;5.73e-40;33!CL:0002057;5.73e-40;33!CL:0000576;1.43e-23;48!CL:0000766;1.51e-17;69!CL:0000235;3.46e-12;6!CL:0000763;9.98e-09;100|ontology_enrichment_celltype_v019_2=CL:0002194,9.52e-51,59;CL:0000576,9.52e-51,59;CL:0000040,9.52e-51,59;CL:0000559,9.52e-51,59;CL:0000473,4.71e-49,48;CL:0000234,4.71e-49,48;CL:0002009,1.33e-48,61;CL:0000839,8.38e-44,66;CL:0000557,6.26e-43,67;CL:0000766,1.01e-40,72;CL:0000860,7.50e-39,42;CL:0002057,7.50e-39,42;CL:0000763,3.51e-27,108;CL:0000049,3.51e-27,108;CL:0002087,3.38e-20,115;CL:0002031,8.99e-19,120;CL:0000738,8.83e-16,136;CL:0002032,3.50e-14,161;CL:0000837,3.50e-14,161;CL:0000037,5.34e-13,168;CL:0000235,3.48e-12,6;CL:0000988,1.25e-11,177|ontology_enrichment_development_v019=CL:0002057;4.16e-29;42!CL:0000049;1.19e-08;108|ontology_enrichment_disease=DOID:305!6.25e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.52e-21!80;UBERON:0001474!5.62e-19!86;UBERON:0004765!3.57e-16!101;UBERON:0001434!3.57e-16!101;UBERON:0002390!6.53e-16!102;UBERON:0003061!6.53e-16!102;UBERON:0002405!1.02e-15!115;UBERON:0002193!1.56e-14!112;UBERON:0000062!2.36e-07!511;UBERON:0002204!5.59e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-36,76;UBERON:0001474,4.60e-34,82;UBERON:0004765,2.34e-31,90;UBERON:0002405,2.67e-28,93;UBERON:0001434,6.09e-28,100;UBERON:0002390,4.12e-26,98;UBERON:0003061,4.12e-26,98;UBERON:0002193,2.32e-22,108;UBERON:0002204,5.42e-14,167;UBERON:0003081,1.48e-07,203|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0,0,0,13.4465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.77408061658038,0,1.8072355126695,1.84877005083394,0,0,0,3.87796785972314,1.60435557976113,1.51907609501096,1.11957737119962,9.71680998056939,0.77272670290256,8.86929256555345,15.87078963493,12.8569552429543,23.2429036905685,83.8782491564525,83.3110137707829,42.2907816713561,59.4292839147513,41.3843902305024,42.4037187306041,106.504972791331,81.2558919566051,21.6478690473995,58.401916112379,37.5288219023291,13.7737751566906,56.8044377924686,30.688182038354,2.63881040149373,14.3613833487575,4.68847225585964,9.86711411337186,31.2061873580127,13.7020894779026,159.040405107518,122.027002910327,136.177405630108,9.08099253950053,34.9863754188186,16.456044146926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.702678285545008,0.130979075497713,0.364295288292542,0.741568885568859,63.6112891563179,57.2886835714589,301.282738535748,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,7.80270440836386,0,0,0,0,0,0,0,0,0,1.24864030732128,2.2818872861778,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,3.27295344709002,1.72082757233402,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.20725313949488,3.37205259772859,1.00528972411631,0,0,0,0,0,0,0,0,0,0,0,118.430379928038,2205.02219040704,782.245807125577,11.2480600784132,0,0.141775097242386,0,0.581267877027924,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,0,0,0,0,0.448524337381443,0,0.66004457238855,0,0,1.690605505112,0,0,0.257207374262142,0,0,0,0,0,1.95441710576241,0,0,0,0,0,405.007189535164,60.7731080632873,630.393479054265,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,2.59627214591811,0.581051892299796,0,2.20557117333613,0.920809889358963,0,0,0,1.35359883872224,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.647747748306418,0,0,0,0,1.66215201785745,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0,1.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=116211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25167 | |||
|TSSclassifier=S | |||
|UniProt=Q96DZ7,C9JCD5 | |||
|association_with_transcript=0bp_to_ENST00000273695,ENST00000446879,uc003fwj.2,uc003fwl.1,uc010iad.1,uc011btv.1_5end | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_1_at_TM4SF19_5end | |||
|id=chr3:196065248..196065267,- | |||
|ontology_enrichment_celltype=CL:0002194!1.18e-29!63;CL:0000576!1.18e-29!63;CL:0000040!1.18e-29!63;CL:0000559!1.18e-29!63;CL:0002009!3.36e-29!65;CL:0000557!5.68e-25!71;CL:0000839!1.24e-24!70;CL:0000766!2.02e-24!76;CL:0000860!4.45e-22!45;CL:0002057!2.06e-21!42;CL:0000763!1.71e-14!112;CL:0000049!1.71e-14!112;CL:0002087!1.03e-10!119;CL:0002031!1.22e-09!124;CL:0000063!1.32e-09!578;CL:0000738!2.04e-08!140;CL:0000066!7.20e-08!254;CL:0000235!7.38e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.10e-41;39!CL:0000234;1.10e-41;39!CL:0000860;5.73e-40;33!CL:0002057;5.73e-40;33!CL:0000576;1.43e-23;48!CL:0000766;1.51e-17;69!CL:0000235;3.46e-12;6!CL:0000763;9.98e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.52e-51,59;CL:0000576,9.52e-51,59;CL:0000040,9.52e-51,59;CL:0000559,9.52e-51,59;CL:0000473,4.71e-49,48;CL:0000234,4.71e-49,48;CL:0002009,1.33e-48,61;CL:0000839,8.38e-44,66;CL:0000557,6.26e-43,67;CL:0000766,1.01e-40,72;CL:0000860,7.50e-39,42;CL:0002057,7.50e-39,42;CL:0000763,3.51e-27,108;CL:0000049,3.51e-27,108;CL:0002087,3.38e-20,115;CL:0002031,8.99e-19,120;CL:0000738,8.83e-16,136;CL:0002032,3.50e-14,161;CL:0000837,3.50e-14,161;CL:0000037,5.34e-13,168;CL:0000235,3.48e-12,6;CL:0000988,1.25e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-29;42!CL:0000049;1.19e-08;108 | |||
|ontology_enrichment_disease=DOID:305!6.25e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.52e-21!80;UBERON:0001474!5.62e-19!86;UBERON:0004765!3.57e-16!101;UBERON:0001434!3.57e-16!101;UBERON:0002390!6.53e-16!102;UBERON:0003061!6.53e-16!102;UBERON:0002405!1.02e-15!115;UBERON:0002193!1.56e-14!112;UBERON:0000062!2.36e-07!511;UBERON:0002204!5.59e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-36,76;UBERON:0001474,4.60e-34,82;UBERON:0004765,2.34e-31,90;UBERON:0002405,2.67e-28,93;UBERON:0001434,6.09e-28,100;UBERON:0002390,4.12e-26,98;UBERON:0003061,4.12e-26,98;UBERON:0002193,2.32e-22,108;UBERON:0002204,5.42e-14,167;UBERON:0003081,1.48e-07,203 | |||
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| |||
|short_description=p1@TM4SF19 | |||
}} |
Revision as of 23:32, 12 September 2013
Short description: | p1@TM4SF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TM4SF19_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 0bp_to_ENST00000273695, ENST00000446879, uc003fwj.2, uc003fwl.1, uc010iad.1, uc011btv.1_5end |
EntrezGene: | TM4SF19 |
HGNC: | 25167 |
UniProt: | Q96DZ7C9JCD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.52e-51 | 59 |
monocyte | 9.52e-51 | 59 |
monoblast | 9.52e-51 | 59 |
promonocyte | 9.52e-51 | 59 |
defensive cell | 4.71e-49 | 48 |
phagocyte | 4.71e-49 | 48 |
macrophage dendritic cell progenitor | 1.33e-48 | 61 |
myeloid lineage restricted progenitor cell | 8.38e-44 | 66 |
granulocyte monocyte progenitor cell | 6.26e-43 | 67 |
myeloid leukocyte | 1.01e-40 | 72 |
classical monocyte | 7.50e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.50e-39 | 42 |
myeloid cell | 3.51e-27 | 108 |
common myeloid progenitor | 3.51e-27 | 108 |
nongranular leukocyte | 3.38e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 8.99e-19 | 120 |
leukocyte | 8.83e-16 | 136 |
hematopoietic oligopotent progenitor cell | 3.50e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.50e-14 | 161 |
hematopoietic stem cell | 5.34e-13 | 168 |
macrophage | 3.48e-12 | 6 |
hematopoietic cell | 1.25e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.17e-36 | 76 |
bone element | 4.60e-34 | 82 |
skeletal element | 2.34e-31 | 90 |
immune system | 2.67e-28 | 93 |
skeletal system | 6.09e-28 | 100 |
hematopoietic system | 4.12e-26 | 98 |
blood island | 4.12e-26 | 98 |
hemolymphoid system | 2.32e-22 | 108 |
musculoskeletal system | 5.42e-14 | 167 |
lateral plate mesoderm | 1.48e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.