FFCP PHASE1:Mm9::chr13:118018159..118018169,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=308|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:118018159..118018169,+|id=chr13:118018159..118018169,+|ontology_enrichment_celltype=CL:0000063!7.50e-20!66;CL:0000988!1.57e-12!32;CL:0002032!1.57e-12!32;CL:0000037!1.57e-12!32;CL:0000566!1.57e-12!32;CL:0000837!1.57e-12!32;CL:0000144!1.65e-12!121;CL:0000012!1.65e-12!121;CL:0002371!2.81e-11!118;CL:0002031!8.41e-11!25;CL:0000548!3.72e-10!115;CL:0000004!3.72e-10!115;CL:0000255!3.72e-10!115;CL:0002320!7.35e-10!46;CL:0000134!7.35e-10!46;CL:0000219!4.50e-09!54;CL:0000066!1.10e-08!25;CL:0002076!1.38e-08!15;CL:0000838!1.73e-08!12;CL:0000738!2.06e-08!17;CL:0002087!2.06e-08!17;CL:0000084!8.07e-08!11;CL:0000827!8.07e-08!11;CL:0000542!1.84e-07!13;CL:0000051!1.84e-07!13;CL:0000791!3.03e-07!9;CL:0000789!3.03e-07!9;CL:0002420!3.03e-07!9;CL:0002419!3.03e-07!9;CL:0000790!3.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-21,32;CL:0002032,1.50e-21,32;CL:0000037,1.50e-21,32;CL:0000837,1.50e-21,32;CL:0002320,5.20e-19,46;CL:0000134,5.20e-19,46;CL:0000219,4.90e-18,54;CL:0002031,1.50e-17,25;CL:0000066,7.94e-15,25;CL:0000034,2.97e-13,97;CL:0000838,7.71e-13,12;CL:0002076,9.17e-13,15;CL:0000738,2.31e-12,17;CL:0002087,2.31e-12,17;CL:0000791,1.11e-11,9;CL:0000789,1.11e-11,9;CL:0002420,1.11e-11,9;CL:0002419,1.11e-11,9;CL:0000790,1.11e-11,9;CL:0000084,1.16e-11,11;CL:0000827,1.16e-11,11;CL:0000542,1.25e-11,13;CL:0000051,1.25e-11,13;CL:0000049,4.10e-11,19;CL:0000624,1.09e-10,8;CL:0000223,1.80e-10,20;CL:0000723,1.85e-09,91;CL:0000048,1.85e-09,91;CL:0000075,2.59e-08,7;CL:0000763,3.85e-08,16;CL:0000893,4.17e-08,6;CL:0002489,4.17e-08,6;CL:0000898,4.17e-08,6;CL:0000809,4.17e-08,6;CL:0000810,4.17e-08,6;CL:0000895,4.17e-08,6;CL:0000808,4.17e-08,6;CL:0000894,4.17e-08,6;CL:0000806,4.17e-08,6;CL:0000807,4.17e-08,6;CL:0000805,4.17e-08,6;CL:0002425,4.17e-08,6;CL:0002436,4.17e-08,6;CL:0002427,4.17e-08,6;CL:0002428,4.17e-08,6;CL:0002429,4.17e-08,6;CL:0002433,4.17e-08,6;CL:0002431,4.17e-08,6;CL:0002432,4.17e-08,6;CL:0002563,1.43e-07,9;CL:0002251,1.43e-07,9;CL:0000239,3.21e-07,6;CL:0000677,3.21e-07,6;CL:0000584,3.21e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.35e-10!46;UBERON:0000344!7.26e-08!15;UBERON:0000485!5.29e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.20e-19,46;UBERON:0000344,1.50e-11,15;UBERON:0000485,1.91e-09,11;UBERON:0001242,2.28e-09,13;UBERON:0001262,2.28e-09,13;UBERON:0004786,2.28e-09,13;UBERON:0003350,1.43e-07,9;UBERON:0004808,1.43e-07,9;UBERON:0001277,1.43e-07,9|phase1_expression=1.76163731815273,1.39590163055744,2.27499619694768,3.0246421130683,2.50447864973174,2.18243053485457,3.97141489012394,4.13194635013044,3.09735188733667,2.34064526321993,6.33506482434368,3.43020283679947,2.9104124088305,2.71003247498892,0,3.23960427823721,8.39474253753776,4.10100814965709,3.56497527374921,6.36584477697045,0.0850432901510698,0.0992909512008853,6.00759515019551,3.03985603307473,4.12936705920906,1.14846392823004,1.7230479846363,3.23206849028834,4.18051522804023,2.26827116783938,1.10865255327652,2.54012269383853,0,0,0.577703239502549,1.32987716286794,1.42918549383658,1.67412652294763,1.5626706890476,1.0470474879476,2.35292595212406,2.04913645487534,1.45653105909346,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,3.85899993932794,5.07753499407941,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0,0,6.6639050133202,5.7434385681157,4.34796733052517,4.30211938490693,0,0,0,0,0,0.170430322578058,4.1565760736459,5.3000936176551,3.09855523508697,5.13305909657271,2.54805239706646,0,4.76280290224671,8.36087556067825,6.57181778519218,0,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,2.27648736561249,7.19883277192089,2.54140454146129,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0.378212160335639,0,0,0,0,0,0.199034266818493,3.51106593656617,6.69104558498259,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,7.53956419696361,8.15858525728064,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0,0,0,0,0.228778173206523,2.20971958992012,1.95932033253121,1.24379976423981,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.269728692769641,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.330916980914195,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0.453460767230423,4.43971906748129,2.9605572681127,3.02192309455341,0,0,0,0,0,0,0,0,3.95262319390481,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0.952587382566147,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p@chr13:118018159..118018169,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=308 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:118018159..118018169,+ | |||
|id=chr13:118018159..118018169,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.50e-20!66;CL:0000988!1.57e-12!32;CL:0002032!1.57e-12!32;CL:0000037!1.57e-12!32;CL:0000566!1.57e-12!32;CL:0000837!1.57e-12!32;CL:0000144!1.65e-12!121;CL:0000012!1.65e-12!121;CL:0002371!2.81e-11!118;CL:0002031!8.41e-11!25;CL:0000548!3.72e-10!115;CL:0000004!3.72e-10!115;CL:0000255!3.72e-10!115;CL:0002320!7.35e-10!46;CL:0000134!7.35e-10!46;CL:0000219!4.50e-09!54;CL:0000066!1.10e-08!25;CL:0002076!1.38e-08!15;CL:0000838!1.73e-08!12;CL:0000738!2.06e-08!17;CL:0002087!2.06e-08!17;CL:0000084!8.07e-08!11;CL:0000827!8.07e-08!11;CL:0000542!1.84e-07!13;CL:0000051!1.84e-07!13;CL:0000791!3.03e-07!9;CL:0000789!3.03e-07!9;CL:0002420!3.03e-07!9;CL:0002419!3.03e-07!9;CL:0000790!3.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-21,32;CL:0002032,1.50e-21,32;CL:0000037,1.50e-21,32;CL:0000837,1.50e-21,32;CL:0002320,5.20e-19,46;CL:0000134,5.20e-19,46;CL:0000219,4.90e-18,54;CL:0002031,1.50e-17,25;CL:0000066,7.94e-15,25;CL:0000034,2.97e-13,97;CL:0000838,7.71e-13,12;CL:0002076,9.17e-13,15;CL:0000738,2.31e-12,17;CL:0002087,2.31e-12,17;CL:0000791,1.11e-11,9;CL:0000789,1.11e-11,9;CL:0002420,1.11e-11,9;CL:0002419,1.11e-11,9;CL:0000790,1.11e-11,9;CL:0000084,1.16e-11,11;CL:0000827,1.16e-11,11;CL:0000542,1.25e-11,13;CL:0000051,1.25e-11,13;CL:0000049,4.10e-11,19;CL:0000624,1.09e-10,8;CL:0000223,1.80e-10,20;CL:0000723,1.85e-09,91;CL:0000048,1.85e-09,91;CL:0000075,2.59e-08,7;CL:0000763,3.85e-08,16;CL:0000893,4.17e-08,6;CL:0002489,4.17e-08,6;CL:0000898,4.17e-08,6;CL:0000809,4.17e-08,6;CL:0000810,4.17e-08,6;CL:0000895,4.17e-08,6;CL:0000808,4.17e-08,6;CL:0000894,4.17e-08,6;CL:0000806,4.17e-08,6;CL:0000807,4.17e-08,6;CL:0000805,4.17e-08,6;CL:0002425,4.17e-08,6;CL:0002436,4.17e-08,6;CL:0002427,4.17e-08,6;CL:0002428,4.17e-08,6;CL:0002429,4.17e-08,6;CL:0002433,4.17e-08,6;CL:0002431,4.17e-08,6;CL:0002432,4.17e-08,6;CL:0002563,1.43e-07,9;CL:0002251,1.43e-07,9;CL:0000239,3.21e-07,6;CL:0000677,3.21e-07,6;CL:0000584,3.21e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.35e-10!46;UBERON:0000344!7.26e-08!15;UBERON:0000485!5.29e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.20e-19,46;UBERON:0000344,1.50e-11,15;UBERON:0000485,1.91e-09,11;UBERON:0001242,2.28e-09,13;UBERON:0001262,2.28e-09,13;UBERON:0004786,2.28e-09,13;UBERON:0003350,1.43e-07,9;UBERON:0004808,1.43e-07,9;UBERON:0001277,1.43e-07,9 | |||
|phase1_expression=1.76163731815273,1.39590163055744,2.27499619694768,3.0246421130683,2.50447864973174,2.18243053485457,3.97141489012394,4.13194635013044,3.09735188733667,2.34064526321993,6.33506482434368,3.43020283679947,2.9104124088305,2.71003247498892,0,3.23960427823721,8.39474253753776,4.10100814965709,3.56497527374921,6.36584477697045,0.0850432901510698,0.0992909512008853,6.00759515019551,3.03985603307473,4.12936705920906,1.14846392823004,1.7230479846363,3.23206849028834,4.18051522804023,2.26827116783938,1.10865255327652,2.54012269383853,0,0,0.577703239502549,1.32987716286794,1.42918549383658,1.67412652294763,1.5626706890476,1.0470474879476,2.35292595212406,2.04913645487534,1.45653105909346,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,3.85899993932794,5.07753499407941,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0,0,6.6639050133202,5.7434385681157,4.34796733052517,4.30211938490693,0,0,0,0,0,0.170430322578058,4.1565760736459,5.3000936176551,3.09855523508697,5.13305909657271,2.54805239706646,0,4.76280290224671,8.36087556067825,6.57181778519218,0,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,2.27648736561249,7.19883277192089,2.54140454146129,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0.378212160335639,0,0,0,0,0,0.199034266818493,3.51106593656617,6.69104558498259,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,7.53956419696361,8.15858525728064,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0,0,0,0,0.228778173206523,2.20971958992012,1.95932033253121,1.24379976423981,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.269728692769641,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.330916980914195,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0.453460767230423,4.43971906748129,2.9605572681127,3.02192309455341,0,0,0,0,0,0,0,0,3.95262319390481,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0.952587382566147,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr13:118018159..118018169,+ | |||
}} |
Revision as of 23:57, 12 September 2013
Short description: | p@chr13:118018159..118018169, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:118018159..118018169, + |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.20e-19 | 46 |
mucosa | 1.50e-11 | 15 |
simple columnar epithelium | 1.91e-09 | 11 |
intestinal mucosa | 2.28e-09 | 13 |
wall of intestine | 2.28e-09 | 13 |
gastrointestinal system mucosa | 2.28e-09 | 13 |
epithelium of mucosa | 1.43e-07 | 9 |
gastrointestinal system epithelium | 1.43e-07 | 9 |
intestinal epithelium | 1.43e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.