FFCP PHASE1:Mm9::chr13:30912611..30912629,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=68|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:30912611..30912629,-|id=chr13:30912611..30912629,-|ontology_enrichment_celltype=CL:0000893!1.73e-16!6;CL:0002489!1.73e-16!6;CL:0000898!1.73e-16!6;CL:0000809!1.73e-16!6;CL:0000810!1.73e-16!6;CL:0000895!1.73e-16!6;CL:0000808!1.73e-16!6;CL:0000894!1.73e-16!6;CL:0000806!1.73e-16!6;CL:0000807!1.73e-16!6;CL:0000805!1.73e-16!6;CL:0002425!1.73e-16!6;CL:0002436!1.73e-16!6;CL:0002427!1.73e-16!6;CL:0002428!1.73e-16!6;CL:0002429!1.73e-16!6;CL:0002433!1.73e-16!6;CL:0002431!1.73e-16!6;CL:0002432!1.73e-16!6;CL:0000838!2.63e-15!12;CL:0000542!4.62e-14!13;CL:0000051!4.62e-14!13;CL:0002031!7.45e-14!25;CL:0000988!1.29e-12!32;CL:0002032!1.29e-12!32;CL:0000037!1.29e-12!32;CL:0000566!1.29e-12!32;CL:0000837!1.29e-12!32;CL:0000084!2.09e-12!11;CL:0000827!2.09e-12!11;CL:0000624!2.62e-12!8;CL:0000791!6.52e-11!9;CL:0000789!6.52e-11!9;CL:0002420!6.52e-11!9;CL:0002419!6.52e-11!9;CL:0000790!6.52e-11!9;CL:0000738!1.52e-10!17;CL:0002087!1.52e-10!17;CL:0002320!3.46e-08!46;CL:0000134!3.46e-08!46|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.27e-17!29;UBERON:0002390!2.78e-16!45;UBERON:0003061!2.78e-16!45;UBERON:0002193!4.33e-15!48;UBERON:0002370!4.43e-15!23;UBERON:0000974!4.43e-15!23;UBERON:0004807!4.43e-15!23;UBERON:0005058!4.43e-15!23;UBERON:0003351!4.43e-15!23;UBERON:0009113!4.43e-15!23;UBERON:0003295!4.43e-15!23;UBERON:0009722!4.43e-15!23;UBERON:0005562!4.43e-15!23;UBERON:0007690!4.43e-15!23;UBERON:0006562!2.21e-14!24;UBERON:0003408!2.21e-14!24;UBERON:0001557!2.21e-14!24;UBERON:0001042!2.21e-14!24;UBERON:0008814!2.21e-14!24;UBERON:0009145!2.21e-14!24;UBERON:0000072!1.35e-12!27;UBERON:0003081!8.15e-11!88;UBERON:0002405!1.83e-09!70;UBERON:0000063!2.49e-09!35;UBERON:0005057!1.19e-08!51;UBERON:0002384!3.46e-08!46;UBERON:0000065!1.02e-07!41;UBERON:0001004!1.71e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0,0,0,0,0,0,9.29205566201001,8.19225842126977,17.1217968225505,5.82336760665956,0,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:30912611..30912629,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:30912611..30912629,- | |||
|id=chr13:30912611..30912629,- | |||
|ontology_enrichment_celltype=CL:0000893!1.73e-16!6;CL:0002489!1.73e-16!6;CL:0000898!1.73e-16!6;CL:0000809!1.73e-16!6;CL:0000810!1.73e-16!6;CL:0000895!1.73e-16!6;CL:0000808!1.73e-16!6;CL:0000894!1.73e-16!6;CL:0000806!1.73e-16!6;CL:0000807!1.73e-16!6;CL:0000805!1.73e-16!6;CL:0002425!1.73e-16!6;CL:0002436!1.73e-16!6;CL:0002427!1.73e-16!6;CL:0002428!1.73e-16!6;CL:0002429!1.73e-16!6;CL:0002433!1.73e-16!6;CL:0002431!1.73e-16!6;CL:0002432!1.73e-16!6;CL:0000838!2.63e-15!12;CL:0000542!4.62e-14!13;CL:0000051!4.62e-14!13;CL:0002031!7.45e-14!25;CL:0000988!1.29e-12!32;CL:0002032!1.29e-12!32;CL:0000037!1.29e-12!32;CL:0000566!1.29e-12!32;CL:0000837!1.29e-12!32;CL:0000084!2.09e-12!11;CL:0000827!2.09e-12!11;CL:0000624!2.62e-12!8;CL:0000791!6.52e-11!9;CL:0000789!6.52e-11!9;CL:0002420!6.52e-11!9;CL:0002419!6.52e-11!9;CL:0000790!6.52e-11!9;CL:0000738!1.52e-10!17;CL:0002087!1.52e-10!17;CL:0002320!3.46e-08!46;CL:0000134!3.46e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.27e-17!29;UBERON:0002390!2.78e-16!45;UBERON:0003061!2.78e-16!45;UBERON:0002193!4.33e-15!48;UBERON:0002370!4.43e-15!23;UBERON:0000974!4.43e-15!23;UBERON:0004807!4.43e-15!23;UBERON:0005058!4.43e-15!23;UBERON:0003351!4.43e-15!23;UBERON:0009113!4.43e-15!23;UBERON:0003295!4.43e-15!23;UBERON:0009722!4.43e-15!23;UBERON:0005562!4.43e-15!23;UBERON:0007690!4.43e-15!23;UBERON:0006562!2.21e-14!24;UBERON:0003408!2.21e-14!24;UBERON:0001557!2.21e-14!24;UBERON:0001042!2.21e-14!24;UBERON:0008814!2.21e-14!24;UBERON:0009145!2.21e-14!24;UBERON:0000072!1.35e-12!27;UBERON:0003081!8.15e-11!88;UBERON:0002405!1.83e-09!70;UBERON:0000063!2.49e-09!35;UBERON:0005057!1.19e-08!51;UBERON:0002384!3.46e-08!46;UBERON:0000065!1.02e-07!41;UBERON:0001004!1.71e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,9.29205566201001,8.19225842126977,17.1217968225505,5.82336760665956,0,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:30912611..30912629,- | |||
}} |
Revision as of 00:21, 13 September 2013
Short description: | p@chr13:30912611..30912629, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:30912611..30912629, - |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.04e-16 | 23 |
neck | 6.04e-16 | 23 |
respiratory system epithelium | 6.04e-16 | 23 |
hemolymphoid system gland | 6.04e-16 | 23 |
pharyngeal epithelium | 6.04e-16 | 23 |
thymic region | 6.04e-16 | 23 |
pharyngeal gland | 6.04e-16 | 23 |
entire pharyngeal arch endoderm | 6.04e-16 | 23 |
thymus primordium | 6.04e-16 | 23 |
early pharyngeal endoderm | 6.04e-16 | 23 |
pharynx | 2.55e-15 | 24 |
gland of gut | 2.55e-15 | 24 |
upper respiratory tract | 2.55e-15 | 24 |
chordate pharynx | 2.55e-15 | 24 |
pharyngeal arch system | 2.55e-15 | 24 |
pharyngeal region of foregut | 2.55e-15 | 24 |
segment of respiratory tract | 1.02e-13 | 27 |
hemopoietic organ | 7.80e-13 | 29 |
immune organ | 7.80e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-11 | 35 |
craniocervical region | 1.67e-10 | 36 |
respiratory tract | 2.53e-09 | 41 |
respiratory system | 4.04e-09 | 42 |
anterior region of body | 6.31e-09 | 43 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
connective tissue | 2.15e-08 | 46 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.