FFCP PHASE1:Hg19::chr4:139936290..139936301,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1422|description=CAGE_peak_at_chr4:139936290..139936301,+|id=chr4:139936290..139936301,+|ontology_enrichment_celltype=CL:0002057!3.10e-42!42;CL:0000860!4.54e-39!45;CL:0002194!1.36e-28!63;CL:0000576!1.36e-28!63;CL:0000040!1.36e-28!63;CL:0000559!1.36e-28!63;CL:0000839!1.05e-27!70;CL:0002009!1.46e-27!65;CL:0000557!3.04e-27!71;CL:0000766!4.16e-25!76;CL:0002087!4.20e-17!119;CL:0002031!3.48e-16!124;CL:0000763!2.47e-15!112;CL:0000049!2.47e-15!112;CL:0000738!5.47e-15!140;CL:0000037!4.27e-11!172;CL:0000566!4.27e-11!172;CL:0002032!9.65e-11!165;CL:0000837!9.65e-11!165;CL:0000988!3.64e-10!182|ontology_enrichment_celltype_v019=CL:0000860;2.81e-59;33!CL:0002057;2.81e-59;33!CL:0000473;2.68e-39;39!CL:0000234;2.68e-39;39!CL:0000576;4.30e-27;48!CL:0000766;3.75e-15;69!CL:0000763;1.34e-10;100!CL:0002087;1.89e-10;104|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-52,42;CL:0002057,1.43e-52,42;CL:0000473,8.35e-46,48;CL:0000234,8.35e-46,48;CL:0002194,2.54e-36,59;CL:0000576,2.54e-36,59;CL:0000040,2.54e-36,59;CL:0000559,2.54e-36,59;CL:0002009,4.26e-35,61;CL:0000839,2.35e-32,66;CL:0000557,7.44e-32,67;CL:0000766,1.47e-29,72;CL:0000763,3.19e-19,108;CL:0000049,3.19e-19,108;CL:0002087,5.91e-18,115;CL:0002031,3.88e-17,120;CL:0000738,6.36e-15,136;CL:0002032,2.48e-12,161;CL:0000837,2.48e-12,161;CL:0000037,9.63e-12,168;CL:0000988,4.72e-11,177|ontology_enrichment_development_v019=CL:0002057;2.92e-33;42!CL:0000049;2.13e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!1.06e-23!86;UBERON:0002371!1.37e-23!80;UBERON:0004765!2.34e-19!101;UBERON:0001434!2.34e-19!101;UBERON:0002390!4.60e-19!102;UBERON:0003061!4.60e-19!102;UBERON:0002193!1.70e-18!112;UBERON:0002405!2.69e-16!115;UBERON:0002204!1.27e-11!167;UBERON:0003081!1.14e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.19e-28,76;UBERON:0001474,8.59e-26,82;UBERON:0004765,2.26e-23,90;UBERON:0002405,1.43e-22,93;UBERON:0002390,2.42e-21,98;UBERON:0003061,2.42e-21,98;UBERON:0001434,6.93e-21,100;UBERON:0002193,3.19e-19,108;UBERON:0002204,7.99e-12,167;UBERON:0003081,2.14e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0.256160706529101,1.89185783910868,3.10271112662957,0.645484683583826,1.35426486594342,0,0,0,2.75475503133812,1.28371610830437,1.91801137739712,0,0,0,5.80418477257168,1.70215567407342,1.24564449799115,1.7587406567972,1.0429658368404,0.434377689410233,7.26479403160043,1.47311054395026,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72008901684737,0.7520696820681,7.35229384232308,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:139936290..139936301,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1422 | |||
|description=CAGE_peak_at_chr4:139936290..139936301,+ | |||
|id=chr4:139936290..139936301,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.10e-42!42;CL:0000860!4.54e-39!45;CL:0002194!1.36e-28!63;CL:0000576!1.36e-28!63;CL:0000040!1.36e-28!63;CL:0000559!1.36e-28!63;CL:0000839!1.05e-27!70;CL:0002009!1.46e-27!65;CL:0000557!3.04e-27!71;CL:0000766!4.16e-25!76;CL:0002087!4.20e-17!119;CL:0002031!3.48e-16!124;CL:0000763!2.47e-15!112;CL:0000049!2.47e-15!112;CL:0000738!5.47e-15!140;CL:0000037!4.27e-11!172;CL:0000566!4.27e-11!172;CL:0002032!9.65e-11!165;CL:0000837!9.65e-11!165;CL:0000988!3.64e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-59;33!CL:0002057;2.81e-59;33!CL:0000473;2.68e-39;39!CL:0000234;2.68e-39;39!CL:0000576;4.30e-27;48!CL:0000766;3.75e-15;69!CL:0000763;1.34e-10;100!CL:0002087;1.89e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-52,42;CL:0002057,1.43e-52,42;CL:0000473,8.35e-46,48;CL:0000234,8.35e-46,48;CL:0002194,2.54e-36,59;CL:0000576,2.54e-36,59;CL:0000040,2.54e-36,59;CL:0000559,2.54e-36,59;CL:0002009,4.26e-35,61;CL:0000839,2.35e-32,66;CL:0000557,7.44e-32,67;CL:0000766,1.47e-29,72;CL:0000763,3.19e-19,108;CL:0000049,3.19e-19,108;CL:0002087,5.91e-18,115;CL:0002031,3.88e-17,120;CL:0000738,6.36e-15,136;CL:0002032,2.48e-12,161;CL:0000837,2.48e-12,161;CL:0000037,9.63e-12,168;CL:0000988,4.72e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-33;42!CL:0000049;2.13e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.06e-23!86;UBERON:0002371!1.37e-23!80;UBERON:0004765!2.34e-19!101;UBERON:0001434!2.34e-19!101;UBERON:0002390!4.60e-19!102;UBERON:0003061!4.60e-19!102;UBERON:0002193!1.70e-18!112;UBERON:0002405!2.69e-16!115;UBERON:0002204!1.27e-11!167;UBERON:0003081!1.14e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.19e-28,76;UBERON:0001474,8.59e-26,82;UBERON:0004765,2.26e-23,90;UBERON:0002405,1.43e-22,93;UBERON:0002390,2.42e-21,98;UBERON:0003061,2.42e-21,98;UBERON:0001434,6.93e-21,100;UBERON:0002193,3.19e-19,108;UBERON:0002204,7.99e-12,167;UBERON:0003081,2.14e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0.256160706529101,1.89185783910868,3.10271112662957,0.645484683583826,1.35426486594342,0,0,0,2.75475503133812,1.28371610830437,1.91801137739712,0,0,0,5.80418477257168,1.70215567407342,1.24564449799115,1.7587406567972,1.0429658368404,0.434377689410233,7.26479403160043,1.47311054395026,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72008901684737,0.7520696820681,7.35229384232308,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:139936290..139936301,+ | |||
}} |
Revision as of 02:28, 13 September 2013
Short description: | p@chr4:139936290..139936301, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:139936290..139936301, + |
Coexpression cluster: | C1422_mature_CD14_Mast_Eosinophils_immature_heart_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.43e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-52 | 42 |
defensive cell | 8.35e-46 | 48 |
phagocyte | 8.35e-46 | 48 |
monopoietic cell | 2.54e-36 | 59 |
monocyte | 2.54e-36 | 59 |
monoblast | 2.54e-36 | 59 |
promonocyte | 2.54e-36 | 59 |
macrophage dendritic cell progenitor | 4.26e-35 | 61 |
myeloid lineage restricted progenitor cell | 2.35e-32 | 66 |
granulocyte monocyte progenitor cell | 7.44e-32 | 67 |
myeloid leukocyte | 1.47e-29 | 72 |
myeloid cell | 3.19e-19 | 108 |
common myeloid progenitor | 3.19e-19 | 108 |
nongranular leukocyte | 5.91e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.88e-17 | 120 |
leukocyte | 6.36e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.48e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-12 | 161 |
hematopoietic stem cell | 9.63e-12 | 168 |
hematopoietic cell | 4.72e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.19e-28 | 76 |
bone element | 8.59e-26 | 82 |
skeletal element | 2.26e-23 | 90 |
immune system | 1.43e-22 | 93 |
hematopoietic system | 2.42e-21 | 98 |
blood island | 2.42e-21 | 98 |
skeletal system | 6.93e-21 | 100 |
hemolymphoid system | 3.19e-19 | 108 |
musculoskeletal system | 7.99e-12 | 167 |
lateral plate mesoderm | 2.14e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.