FFCP PHASE1:Mm9::chr17:35400991..35401003,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14964|HGNC=|MCL_coexpression_id=316|UniProt=P01896|association_with_transcript=18bp_to_uc008chh.1_5end|description=CAGE_peak_7_at_H2-D1_5end|id=chr17:35400991..35401003,+|ontology_enrichment_celltype=CL:0000988!2.62e-14!32;CL:0002032!2.62e-14!32;CL:0000037!2.62e-14!32;CL:0000566!2.62e-14!32;CL:0000837!2.62e-14!32;CL:0002320!2.48e-13!46;CL:0000134!2.48e-13!46;CL:0002031!3.03e-13!25;CL:0000063!1.39e-12!66;CL:0000738!4.66e-12!17;CL:0002087!4.66e-12!17;CL:0000219!1.05e-10!54;CL:0000034!6.39e-10!97;CL:0000791!1.06e-09!9;CL:0000789!1.06e-09!9;CL:0002420!1.06e-09!9;CL:0002419!1.06e-09!9;CL:0000790!1.06e-09!9;CL:0000144!1.09e-09!121;CL:0000012!1.09e-09!121;CL:0000838!1.62e-09!12;CL:0000723!5.31e-09!91;CL:0000048!5.31e-09!91;CL:0000624!9.82e-09!8;CL:0000084!1.00e-08!11;CL:0000827!1.00e-08!11;CL:0000542!1.57e-08!13;CL:0000051!1.57e-08!13;CL:0002371!3.46e-08!118;CL:0000049!3.21e-07!19;CL:0000893!7.20e-07!6;CL:0002489!7.20e-07!6;CL:0000898!7.20e-07!6;CL:0000809!7.20e-07!6;CL:0000810!7.20e-07!6;CL:0000895!7.20e-07!6;CL:0000808!7.20e-07!6;CL:0000894!7.20e-07!6;CL:0000806!7.20e-07!6;CL:0000807!7.20e-07!6;CL:0000805!7.20e-07!6;CL:0002425!7.20e-07!6;CL:0002436!7.20e-07!6;CL:0002427!7.20e-07!6;CL:0002428!7.20e-07!6;CL:0002429!7.20e-07!6;CL:0002433!7.20e-07!6;CL:0002431!7.20e-07!6;CL:0002432!7.20e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.14e-13,9;CL:0000789,1.14e-13,9;CL:0002420,1.14e-13,9;CL:0002419,1.14e-13,9;CL:0000790,1.14e-13,9;CL:0002092,1.25e-12,3;CL:0002540,1.25e-12,3;CL:0000738,1.59e-12,17;CL:0002087,1.59e-12,17;CL:0002320,3.97e-11,46;CL:0000134,3.97e-11,46;CL:0000084,4.31e-11,11;CL:0000827,4.31e-11,11;CL:0000624,5.04e-11,8;CL:0000838,4.01e-10,12;CL:0000893,9.60e-10,6;CL:0002489,9.60e-10,6;CL:0000898,9.60e-10,6;CL:0000809,9.60e-10,6;CL:0000810,9.60e-10,6;CL:0000895,9.60e-10,6;CL:0000808,9.60e-10,6;CL:0000894,9.60e-10,6;CL:0000806,9.60e-10,6;CL:0000807,9.60e-10,6;CL:0000805,9.60e-10,6;CL:0002425,9.60e-10,6;CL:0002436,9.60e-10,6;CL:0002427,9.60e-10,6;CL:0002428,9.60e-10,6;CL:0002429,9.60e-10,6;CL:0002433,9.60e-10,6;CL:0002431,9.60e-10,6;CL:0002432,9.60e-10,6;CL:0000988,1.42e-09,32;CL:0002032,1.42e-09,32;CL:0000037,1.42e-09,32;CL:0000837,1.42e-09,32;CL:0000542,2.65e-09,13;CL:0000051,2.65e-09,13;CL:0000219,4.08e-09,54;CL:0002476,9.86e-09,2;CL:0000473,1.46e-08,7;CL:0002031,3.78e-08,25;CL:0000034,1.25e-07,97;CL:0000723,2.91e-07,91;CL:0000048,2.91e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.02e-11,3;DOID:4045,3.02e-11,3|ontology_enrichment_uberon=UBERON:0002384!2.48e-13!46;UBERON:0002371!1.57e-11!16;UBERON:0002193!4.04e-08!48;UBERON:0002390!2.10e-07!45;UBERON:0003061!2.10e-07!45;UBERON:0002204!2.74e-07!32;UBERON:0001474!3.50e-07!22;UBERON:0004765!3.50e-07!22;UBERON:0001434!3.50e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.97e-11,46|phase1_expression=0,1.39590163055744,0,0.30246421130683,0.500895729946347,0,0.233612640595526,2.06597317506522,1.83025338797167,3.7450324211519,0.171217968225505,0.797721589953364,1.02720437958723,2.53519167015092,0.333109761815663,0.404950534779652,0,0.946386496074713,0.411343300817216,0.42438965179803,0,0.0992909512008853,0,0.95995453676044,0.22940928106717,2.29692785646008,0,1.07735616342945,1.52018735565099,2.01624103807945,0.443461021310609,0,0,0,0,0,0.612508068787107,2.09265815368454,1.5626706890476,2.09409497589519,2.35292595212406,3.41522742479223,3.88408282424923,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,1.34437519656986,0,0.286533439938757,0,0,0,0,0,0,4.04954872776629,7.9109309005358,8.5257613793532,0.299600110518405,0.384218305321555,0,0.405017814995072,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.294628585473668,0,0,0.151452386666368,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,2.51611761462433,0,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,6.03165135757089,3.26343410291226,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.979660166265606,1.10559979043539,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@H2-D1}} | ||
|EntrezGene=14964 | |||
|HGNC= | |||
|MCL_coexpression_id=316 | |||
|UniProt=P01896 | |||
|association_with_transcript=18bp_to_uc008chh.1_5end | |||
|description=CAGE_peak_7_at_H2-D1_5end | |||
|id=chr17:35400991..35401003,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.62e-14!32;CL:0002032!2.62e-14!32;CL:0000037!2.62e-14!32;CL:0000566!2.62e-14!32;CL:0000837!2.62e-14!32;CL:0002320!2.48e-13!46;CL:0000134!2.48e-13!46;CL:0002031!3.03e-13!25;CL:0000063!1.39e-12!66;CL:0000738!4.66e-12!17;CL:0002087!4.66e-12!17;CL:0000219!1.05e-10!54;CL:0000034!6.39e-10!97;CL:0000791!1.06e-09!9;CL:0000789!1.06e-09!9;CL:0002420!1.06e-09!9;CL:0002419!1.06e-09!9;CL:0000790!1.06e-09!9;CL:0000144!1.09e-09!121;CL:0000012!1.09e-09!121;CL:0000838!1.62e-09!12;CL:0000723!5.31e-09!91;CL:0000048!5.31e-09!91;CL:0000624!9.82e-09!8;CL:0000084!1.00e-08!11;CL:0000827!1.00e-08!11;CL:0000542!1.57e-08!13;CL:0000051!1.57e-08!13;CL:0002371!3.46e-08!118;CL:0000049!3.21e-07!19;CL:0000893!7.20e-07!6;CL:0002489!7.20e-07!6;CL:0000898!7.20e-07!6;CL:0000809!7.20e-07!6;CL:0000810!7.20e-07!6;CL:0000895!7.20e-07!6;CL:0000808!7.20e-07!6;CL:0000894!7.20e-07!6;CL:0000806!7.20e-07!6;CL:0000807!7.20e-07!6;CL:0000805!7.20e-07!6;CL:0002425!7.20e-07!6;CL:0002436!7.20e-07!6;CL:0002427!7.20e-07!6;CL:0002428!7.20e-07!6;CL:0002429!7.20e-07!6;CL:0002433!7.20e-07!6;CL:0002431!7.20e-07!6;CL:0002432!7.20e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.14e-13,9;CL:0000789,1.14e-13,9;CL:0002420,1.14e-13,9;CL:0002419,1.14e-13,9;CL:0000790,1.14e-13,9;CL:0002092,1.25e-12,3;CL:0002540,1.25e-12,3;CL:0000738,1.59e-12,17;CL:0002087,1.59e-12,17;CL:0002320,3.97e-11,46;CL:0000134,3.97e-11,46;CL:0000084,4.31e-11,11;CL:0000827,4.31e-11,11;CL:0000624,5.04e-11,8;CL:0000838,4.01e-10,12;CL:0000893,9.60e-10,6;CL:0002489,9.60e-10,6;CL:0000898,9.60e-10,6;CL:0000809,9.60e-10,6;CL:0000810,9.60e-10,6;CL:0000895,9.60e-10,6;CL:0000808,9.60e-10,6;CL:0000894,9.60e-10,6;CL:0000806,9.60e-10,6;CL:0000807,9.60e-10,6;CL:0000805,9.60e-10,6;CL:0002425,9.60e-10,6;CL:0002436,9.60e-10,6;CL:0002427,9.60e-10,6;CL:0002428,9.60e-10,6;CL:0002429,9.60e-10,6;CL:0002433,9.60e-10,6;CL:0002431,9.60e-10,6;CL:0002432,9.60e-10,6;CL:0000988,1.42e-09,32;CL:0002032,1.42e-09,32;CL:0000037,1.42e-09,32;CL:0000837,1.42e-09,32;CL:0000542,2.65e-09,13;CL:0000051,2.65e-09,13;CL:0000219,4.08e-09,54;CL:0002476,9.86e-09,2;CL:0000473,1.46e-08,7;CL:0002031,3.78e-08,25;CL:0000034,1.25e-07,97;CL:0000723,2.91e-07,91;CL:0000048,2.91e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.02e-11,3;DOID:4045,3.02e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.48e-13!46;UBERON:0002371!1.57e-11!16;UBERON:0002193!4.04e-08!48;UBERON:0002390!2.10e-07!45;UBERON:0003061!2.10e-07!45;UBERON:0002204!2.74e-07!32;UBERON:0001474!3.50e-07!22;UBERON:0004765!3.50e-07!22;UBERON:0001434!3.50e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.97e-11,46 | |||
|phase1_expression=0,1.39590163055744,0,0.30246421130683,0.500895729946347,0,0.233612640595526,2.06597317506522,1.83025338797167,3.7450324211519,0.171217968225505,0.797721589953364,1.02720437958723,2.53519167015092,0.333109761815663,0.404950534779652,0,0.946386496074713,0.411343300817216,0.42438965179803,0,0.0992909512008853,0,0.95995453676044,0.22940928106717,2.29692785646008,0,1.07735616342945,1.52018735565099,2.01624103807945,0.443461021310609,0,0,0,0,0,0.612508068787107,2.09265815368454,1.5626706890476,2.09409497589519,2.35292595212406,3.41522742479223,3.88408282424923,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,1.34437519656986,0,0.286533439938757,0,0,0,0,0,0,4.04954872776629,7.9109309005358,8.5257613793532,0.299600110518405,0.384218305321555,0,0.405017814995072,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.294628585473668,0,0,0.151452386666368,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,2.51611761462433,0,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,6.03165135757089,3.26343410291226,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.979660166265606,1.10559979043539,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@H2-D1 | |||
}} |
Revision as of 14:24, 13 September 2013
Short description: | p7@H2-D1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_H2-D1_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 18bp_to_uc008chh.1_5end |
EntrezGene: | H2-D1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.97e-11 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.02e-11 | 3 |
muscle cancer | 3.02e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.