FFCP PHASE1:Hg19::chr5:56112749..56112774,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1886|description=CAGE_peak_at_chr5:56112749..56112774,+|id=chr5:56112749..56112774,+|ontology_enrichment_celltype=CL:0000738!8.18e-60!140;CL:0002087!1.92e-55!119;CL:0000037!1.11e-51!172;CL:0000566!1.11e-51!172;CL:0002031!1.89e-50!124;CL:0000988!1.73e-49!182;CL:0002032!9.74e-48!165;CL:0000837!9.74e-48!165;CL:0002057!4.29e-39!42;CL:0000860!1.23e-36!45;CL:0000766!1.50e-34!76;CL:0002009!1.70e-34!65;CL:0000557!8.18e-34!71;CL:0002194!1.74e-33!63;CL:0000576!1.74e-33!63;CL:0000040!1.74e-33!63;CL:0000559!1.74e-33!63;CL:0000839!2.17e-30!70;CL:0000763!2.05e-27!112;CL:0000049!2.05e-27!112;CL:0000542!2.83e-18!53;CL:0000051!2.83e-18!53;CL:0000838!1.03e-17!52;CL:0000945!3.99e-14!24;CL:0000826!3.99e-14!24;CL:0000236!2.21e-12!14;CL:0002393!1.96e-10!9;CL:0002397!1.96e-10!9;CL:0000134!1.02e-09!358;CL:0002320!3.51e-09!365;CL:0000219!2.77e-08!390;CL:0000791!3.18e-07!18;CL:0000789!3.18e-07!18;CL:0002420!3.18e-07!18;CL:0002419!3.18e-07!18;CL:0000790!3.18e-07!18|ontology_enrichment_celltype_v019=CL:0000860;3.12e-48;33!CL:0002057;3.12e-48;33!CL:0000473;2.05e-39;39!CL:0000234;2.05e-39;39!CL:0000576;4.03e-37;48!CL:0000766;1.94e-26;69!CL:0000236;2.37e-24;13!CL:0002087;2.29e-22;104!CL:0000945;9.02e-16;24!CL:0002393;7.77e-14;6!CL:0002397;7.77e-14;6!CL:0000738;9.59e-14;136!CL:0000763;4.72e-10;100!CL:0000988;5.68e-10;177!CL:0000542;8.94e-10;53!CL:0000624;1.24e-08;6!CL:0000875;1.54e-08;3!CL:0002396;1.54e-08;3!CL:0000226;3.31e-07;3!CL:0000842;3.31e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,3.68e-73,42;CL:0002057,3.68e-73,42;CL:0000473,1.69e-69,48;CL:0000234,1.69e-69,48;CL:0002087,2.55e-69,115;CL:0000738,6.21e-66,136;CL:0002031,8.68e-59,120;CL:0002194,5.00e-53,59;CL:0000576,5.00e-53,59;CL:0000040,5.00e-53,59;CL:0000559,5.00e-53,59;CL:0000037,1.22e-51,168;CL:0002009,6.62e-51,61;CL:0000766,4.27e-48,72;CL:0000988,4.66e-48,177;CL:0000557,7.49e-48,67;CL:0002032,1.68e-47,161;CL:0000837,1.68e-47,161;CL:0000839,3.70e-46,66;CL:0000763,4.56e-31,108;CL:0000049,4.56e-31,108;CL:0000236,1.88e-22,14;CL:0002393,7.26e-21,9;CL:0002397,7.26e-21,9;CL:0000945,8.99e-16,24;CL:0000826,8.99e-16,24;CL:0000838,8.71e-15,52;CL:0000134,9.56e-15,354;CL:0000542,2.16e-14,53;CL:0000051,2.16e-14,53;CL:0002320,4.12e-14,361;CL:0000219,6.84e-12,386;CL:0000034,6.37e-10,441;CL:0000048,9.63e-10,427;CL:0000723,2.29e-09,433;CL:0000624,7.43e-09,6;CL:0000875,1.57e-08,3;CL:0002396,1.57e-08,3;CL:0000226,2.33e-07,3;CL:0000842,2.33e-07,3|ontology_enrichment_development_v019=CL:0002057;4.45e-52;42!CL:0000049;1.94e-10;108!CL:0000051;8.94e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.60e-35!102;UBERON:0003061!1.60e-35!102;UBERON:0002193!6.18e-33!112;UBERON:0002371!6.05e-30!80;UBERON:0001474!3.33e-28!86;UBERON:0002405!3.55e-23!115;UBERON:0004765!1.46e-20!101;UBERON:0001434!1.46e-20!101;UBERON:0002384!3.87e-09!375;UBERON:0003081!1.63e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.57e-43,76;UBERON:0002390,8.75e-40,98;UBERON:0003061,8.75e-40,98;UBERON:0001474,9.32e-39,82;UBERON:0002193,7.85e-35,108;UBERON:0004765,3.26e-34,90;UBERON:0002405,1.04e-32,93;UBERON:0001434,1.47e-29,100;UBERON:0002384,6.91e-14,371;UBERON:0002204,5.78e-13,167;UBERON:0003081,2.10e-12,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.410502947249729,0.236132343941038,0.786728553697808,0.767658796194425,1.85779347979291,0,0,0,0.387336002901508,0.284338464974843,0.587200878669695,3.87796785972314,1.80490002723128,2.60413044859022,0.223915474239924,0,0.257575567634187,0.872389432677388,1.88937971844405,2.42584061187816,2.09186133215116,3.28934310417461,3.09706370895104,0.863077176966451,3.33008918487831,2.36482229888585,2.75796544589295,5.16387746867061,12.1883837934908,1.50593871634084,1.09162460023138,3.14612878223118,1.53041946185451,2.56743221660875,5.11469700639233,1.31940520074686,2.99195486432448,2.55734850319616,1.45104619314292,0.56738522469114,3.11411124497787,2.51248665256743,1.5644487552606,4.12658804939722,3.63239701580021,2.57794345191295,4.43047342417238,10.985274888221,5.74031609905618,5.03180749220102,2.80821577866238,1.95229960693958,5.30394436100364,11.6855224933912,10.7415005687509,16.2571096850524,5.27988733383968,4.36910889009705,5.33705552318133,1.70692089026603,4.00395987036012,3.4485146397269,2.64417949113945,5.72432252721218,7.96898156753228,6.45960908308033,13.379562984383,1.32171328579026,1.12101712596307,0.263384084775077,3.34406609193516,1.96505381374582,1.64481199199607,1.00311897234407,1.30368906653436,1.4203434172042,1.94826728407911,0.779873198196215,2.65145316727353,2.43687284041983,3.79125409271022,1.5370958367081,1.1705341280389,0.657751618414705,0.552700035571697,0.579606171470105,0.593146252648242,0.5350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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1886 | |||
|description=CAGE_peak_at_chr5:56112749..56112774,+ | |||
|id=chr5:56112749..56112774,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.18e-60!140;CL:0002087!1.92e-55!119;CL:0000037!1.11e-51!172;CL:0000566!1.11e-51!172;CL:0002031!1.89e-50!124;CL:0000988!1.73e-49!182;CL:0002032!9.74e-48!165;CL:0000837!9.74e-48!165;CL:0002057!4.29e-39!42;CL:0000860!1.23e-36!45;CL:0000766!1.50e-34!76;CL:0002009!1.70e-34!65;CL:0000557!8.18e-34!71;CL:0002194!1.74e-33!63;CL:0000576!1.74e-33!63;CL:0000040!1.74e-33!63;CL:0000559!1.74e-33!63;CL:0000839!2.17e-30!70;CL:0000763!2.05e-27!112;CL:0000049!2.05e-27!112;CL:0000542!2.83e-18!53;CL:0000051!2.83e-18!53;CL:0000838!1.03e-17!52;CL:0000945!3.99e-14!24;CL:0000826!3.99e-14!24;CL:0000236!2.21e-12!14;CL:0002393!1.96e-10!9;CL:0002397!1.96e-10!9;CL:0000134!1.02e-09!358;CL:0002320!3.51e-09!365;CL:0000219!2.77e-08!390;CL:0000791!3.18e-07!18;CL:0000789!3.18e-07!18;CL:0002420!3.18e-07!18;CL:0002419!3.18e-07!18;CL:0000790!3.18e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-48;33!CL:0002057;3.12e-48;33!CL:0000473;2.05e-39;39!CL:0000234;2.05e-39;39!CL:0000576;4.03e-37;48!CL:0000766;1.94e-26;69!CL:0000236;2.37e-24;13!CL:0002087;2.29e-22;104!CL:0000945;9.02e-16;24!CL:0002393;7.77e-14;6!CL:0002397;7.77e-14;6!CL:0000738;9.59e-14;136!CL:0000763;4.72e-10;100!CL:0000988;5.68e-10;177!CL:0000542;8.94e-10;53!CL:0000624;1.24e-08;6!CL:0000875;1.54e-08;3!CL:0002396;1.54e-08;3!CL:0000226;3.31e-07;3!CL:0000842;3.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.68e-73,42;CL:0002057,3.68e-73,42;CL:0000473,1.69e-69,48;CL:0000234,1.69e-69,48;CL:0002087,2.55e-69,115;CL:0000738,6.21e-66,136;CL:0002031,8.68e-59,120;CL:0002194,5.00e-53,59;CL:0000576,5.00e-53,59;CL:0000040,5.00e-53,59;CL:0000559,5.00e-53,59;CL:0000037,1.22e-51,168;CL:0002009,6.62e-51,61;CL:0000766,4.27e-48,72;CL:0000988,4.66e-48,177;CL:0000557,7.49e-48,67;CL:0002032,1.68e-47,161;CL:0000837,1.68e-47,161;CL:0000839,3.70e-46,66;CL:0000763,4.56e-31,108;CL:0000049,4.56e-31,108;CL:0000236,1.88e-22,14;CL:0002393,7.26e-21,9;CL:0002397,7.26e-21,9;CL:0000945,8.99e-16,24;CL:0000826,8.99e-16,24;CL:0000838,8.71e-15,52;CL:0000134,9.56e-15,354;CL:0000542,2.16e-14,53;CL:0000051,2.16e-14,53;CL:0002320,4.12e-14,361;CL:0000219,6.84e-12,386;CL:0000034,6.37e-10,441;CL:0000048,9.63e-10,427;CL:0000723,2.29e-09,433;CL:0000624,7.43e-09,6;CL:0000875,1.57e-08,3;CL:0002396,1.57e-08,3;CL:0000226,2.33e-07,3;CL:0000842,2.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.45e-52;42!CL:0000049;1.94e-10;108!CL:0000051;8.94e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.60e-35!102;UBERON:0003061!1.60e-35!102;UBERON:0002193!6.18e-33!112;UBERON:0002371!6.05e-30!80;UBERON:0001474!3.33e-28!86;UBERON:0002405!3.55e-23!115;UBERON:0004765!1.46e-20!101;UBERON:0001434!1.46e-20!101;UBERON:0002384!3.87e-09!375;UBERON:0003081!1.63e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.57e-43,76;UBERON:0002390,8.75e-40,98;UBERON:0003061,8.75e-40,98;UBERON:0001474,9.32e-39,82;UBERON:0002193,7.85e-35,108;UBERON:0004765,3.26e-34,90;UBERON:0002405,1.04e-32,93;UBERON:0001434,1.47e-29,100;UBERON:0002384,6.91e-14,371;UBERON:0002204,5.78e-13,167;UBERON:0003081,2.10e-12,203 | |||
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| |||
|short_description=p@chr5:56112749..56112774,+ | |||
}} |
Revision as of 15:56, 13 September 2013
Short description: | p@chr5:56112749..56112774, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:56112749..56112774, + |
Coexpression cluster: | C1886_CD14CD16_CD14_CD19_Basophils_CD133_renal_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.57e-43 | 76 |
hematopoietic system | 8.75e-40 | 98 |
blood island | 8.75e-40 | 98 |
bone element | 9.32e-39 | 82 |
hemolymphoid system | 7.85e-35 | 108 |
skeletal element | 3.26e-34 | 90 |
immune system | 1.04e-32 | 93 |
skeletal system | 1.47e-29 | 100 |
connective tissue | 6.91e-14 | 371 |
musculoskeletal system | 5.78e-13 | 167 |
lateral plate mesoderm | 2.10e-12 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.