FFCP PHASE1:Hg19::chr6:160102006..160102195,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=97bp_to_BC041951_5end | |||
|coexpression_cluster_id=C954 | |||
|description=CAGE_peak_1_at_BC041951_5end | |||
|id=chr6:160102006..160102195,- | |||
|ontology_enrichment_celltype=CL:0000766!5.28e-18!76;CL:0002194!1.47e-16!63;CL:0000576!1.47e-16!63;CL:0000040!1.47e-16!63;CL:0000559!1.47e-16!63;CL:0002057!6.79e-16!42;CL:0002009!1.45e-15!65;CL:0000839!4.15e-14!70;CL:0000860!9.52e-14!45;CL:0000557!2.79e-13!71;CL:0000763!3.69e-07!112;CL:0000049!3.69e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.18e-20;33!CL:0002057;9.18e-20;33!CL:0000473;1.64e-19;39!CL:0000234;1.64e-19;39!CL:0000576;1.61e-11;48!CL:0000766;2.83e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-24,72;CL:0002194,2.32e-22,59;CL:0000576,2.32e-22,59;CL:0000040,2.32e-22,59;CL:0000559,2.32e-22,59;CL:0000473,5.45e-22,48;CL:0000234,5.45e-22,48;CL:0002009,6.37e-21,61;CL:0000839,4.34e-19,66;CL:0000557,1.73e-18,67;CL:0000860,2.80e-18,42;CL:0002057,2.80e-18,42;CL:0000763,2.32e-11,108;CL:0000049,2.32e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;9.96e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.95e-13!102;UBERON:0003061!4.95e-13!102;UBERON:0007023!1.06e-12!115;UBERON:0002193!1.07e-12!112;UBERON:0002371!5.01e-12!80;UBERON:0001474!7.25e-11!86;UBERON:0002204!6.20e-10!167;UBERON:0002405!6.79e-10!115;UBERON:0004765!8.37e-10!101;UBERON:0001434!8.37e-10!101;UBERON:0000926!1.78e-07!448;UBERON:0004120!1.78e-07!448;UBERON:0006603!1.78e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.00e-17,108;UBERON:0002390,1.80e-17,98;UBERON:0003061,1.80e-17,98;UBERON:0002371,1.94e-16,76;UBERON:0001474,4.83e-15,82;UBERON:0002405,8.14e-15,93;UBERON:0001434,9.85e-15,100;UBERON:0004765,1.36e-14,90;UBERON:0002204,8.54e-13,167;UBERON:0007023,3.24e-09,114;UBERON:0003081,3.30e-08,203;UBERON:0000926,4.81e-07,315;UBERON:0004120,4.81e-07,315;UBERON:0006603,4.81e-07,315 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.986680828671798,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,2.35067065379855,0,0,0.218441372130172,0,1.36142988256051,1.32558950291166,12.101852636132,10.8485015044316,16.7971320789096,13.1741855673437,0.369363174230364,0,0,1.14494394852423,0.136874425072884,0.376627918784408,0.152826811495903,0.0821005894499457,0,1.57345710739562,2.30297638858328,1.54816123316076,0,0,0,0.0774672005803016,0.853015394924529,0.587200878669695,37.6716877801677,12.4337557431488,25.8242936151864,2.46307021663917,1.6194683300949,3.09090681161024,4.9435401185052,2.64513160582167,5.09426528494414,31.3779199822674,23.4365696172441,25.3959224133985,46.0307827715441,29.2023205443175,26.9589742072987,54.1250718756491,25.819387343353,79.9016270906616,15.0593871634084,7.64137220161968,13.4834090667051,56.0133523038752,42.0417025469683,84.3925006054734,22.7597397128834,11.9678194572979,6.81959600852311,75.4544020434318,72.6253087604659,91.5548706023495,41.2047811021059,36.5038042894141,9.77349801173025,59.3291512580701,47.8760926783834,88.6094684834476,0.211255286311942,0.212604299965044,0.628975936525128,0.336985893439485,1.50176892841506,0.64290234678832,0.570025487482497,0.79566670879636,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0,1.1384259382189,1.76171156811282,1.14681968437569,1.32171328579026,2.24203425192614,0.790152254325231,0.590129310341499,1.57204305099666,1.43921049299656,0.167186495390678,0,0.473447805734733,0,0,0.294605907474837,0,0.541607727530031,0.128091319725675,0.130059347559878,0.328875809207352,0.552700035571697,0,0,0.535081656179426,0,0.339928028092699,0,0.34362744548263,0,0.637130828648193,0,0.950452044448374,0.301150238155546,0,0,0.473554504088034,0,0.604820229674197,0.267440195783507,0.579297615531196,14.6284119788377,0.670700859703636,0.255725123687061,1.44575660953827,2.00535164254356,2.17269778441236,0,10.705967146658,0.0945348171640679,0,0.263504357079378,0.589405839739707,0,0.741568885568859,1.9472843619281,2.26368658489047,1.86141144726411,1.66943437013739,0.571994910780128,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0.805658634218294,6.0821768457481,1.22031028774085,2.20597848207521,0,0.0892997282840798,0.673588117878509,0.337834441449967,0,0,0.183201743930407,15.8136500923276,38.7780264148325,0,4.96971951695318,0.379891534993739,1.19168262731897,0,0.354668382198357,0,4.2699598291882,0.24666754841716,0.311211035399766,2.82892411346345,0.326923806226917,0.454072282934794,0,0.234321431833797,2.18512053781224,0.570471821544449,3.73621701379503,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.413303124703062,10.6920257155385,11.8688126053707,0,2.15585442544872,0,0,0,1.31693286264251,0,16.5261864797256,0.453728732640084,0,0.640672166455702,0.211931901159562,0,0.412210116953756,0,0,0,0.194874010322397,0,0.368199594569197,0,0,0,0.339121184620975,1.54608682530637,0,2.29443676311203,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0.504641701751257,1.09493207722749,0,1.28648187638577,0,8.8229906326076,6.49691533502627,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0.653638332277218,0.71181185733329,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,41.8291614912042,27.5191620669735,14.1789577603537,0,0,0,0,0,0.301586917234893,0.833296006426766,0,0,0,0.231860809950154,0.234817388471643,9.96128489551409,26.8531597294434,17.1228737011138,0,0,7.14029317653452,4.91408956792399,5.20209068010549,0,0.335964256397719,0.425325291727159,0.985143749731331,0.290633938513962,0,0,0.088048434013226,1.03664057770386,1.29707958075265,0.37872730027914,0.253991577168676,0,0,1.71072446022705,0.205654985406647,0,0.857479297891735,0,0,0.1466765716419,4.26596662000667,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0.791951872933429,5.12446941001296,0,3.79897366491817,6.08118903205952,12.054170194371,37.9501091069457,0,0,0,2.02693829334611,3.08214483825575,0.537182889719687,1.34502172792233,0.788123040807709,0.646882724578552,1.02674429023799,0,0,0,0,0,18.7251755986796,23.932916736322,14.0901274568252,1.71768088406796,1.00034104211935,1.62759014219841,1.24782516918484,0.892144943985809,0.473107245101804,0.819989904948992,1.80567659836631,0,1.03473071292505,0,0.184369168541703,1.04260337361699,0,0,0.82707210449155,4.09856981555372,1.70764092485511,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.355123450626254,0.410635780069046,1.03850885836724,0.929683027679674,0.241718899183244,0.200506470303285,0.0920809889358963,0.229628896329213,0.364182336013434,2.09799063935079,1.35359883872224,0.231046011313244,0,0,0.422206515571503,0,0,0.647747748306418,0,0,0,0.764628819135115,1.66215201785745,0.447749509444357,0.219259876645935,0.522870902049801,1.02580050046556,0,0.325378394664303,5.04900957073839,0.183138929636687,0.577566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| |||
|short_description=p1@BC041951 | |||
}} |
Revision as of 19:05, 13 September 2013
Short description: | p1@BC041951 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC041951_5end |
Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
Association with transcript: | 97bp_to_BC041951_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.50e-24 | 72 |
monopoietic cell | 2.32e-22 | 59 |
monocyte | 2.32e-22 | 59 |
monoblast | 2.32e-22 | 59 |
promonocyte | 2.32e-22 | 59 |
defensive cell | 5.45e-22 | 48 |
phagocyte | 5.45e-22 | 48 |
macrophage dendritic cell progenitor | 6.37e-21 | 61 |
myeloid lineage restricted progenitor cell | 4.34e-19 | 66 |
granulocyte monocyte progenitor cell | 1.73e-18 | 67 |
classical monocyte | 2.80e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-18 | 42 |
myeloid cell | 2.32e-11 | 108 |
common myeloid progenitor | 2.32e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.00e-17 | 108 |
hematopoietic system | 1.80e-17 | 98 |
blood island | 1.80e-17 | 98 |
bone marrow | 1.94e-16 | 76 |
bone element | 4.83e-15 | 82 |
immune system | 8.14e-15 | 93 |
skeletal system | 9.85e-15 | 100 |
skeletal element | 1.36e-14 | 90 |
musculoskeletal system | 8.54e-13 | 167 |
adult organism | 3.24e-09 | 114 |
lateral plate mesoderm | 3.30e-08 | 203 |
mesoderm | 4.81e-07 | 315 |
mesoderm-derived structure | 4.81e-07 | 315 |
presumptive mesoderm | 4.81e-07 | 315 |
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