FFCP PHASE1:Hg19::chr7:27169801..27169844,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5105 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000511914_5end | |||
|description=CAGE_peak_2_at_HOXA4_5end | |||
|id=chr7:27169801..27169844,- | |||
|ontology_enrichment_celltype=CL:0000222!1.57e-17!119;CL:0002139!4.05e-11!24;CL:1000497!5.34e-11!18;CL:0002518!5.34e-11!18;CL:0002078!1.31e-09!44;CL:1000449!2.20e-09!16;CL:0000115!2.67e-09!35;CL:0000071!3.39e-09!18;CL:0002546!3.39e-09!18;CL:0000213!1.19e-08!57;CL:0000215!1.19e-08!57;CL:0000076!2.13e-08!62;CL:0000680!4.01e-08!57;CL:0000056!4.01e-08!57;CL:0000355!4.01e-08!57;CL:0000183!8.42e-08!59;CL:1000507!8.67e-08!12;CL:1000494!8.67e-08!12;CL:0002681!9.69e-08!13;CL:0002584!9.69e-08!13;CL:0000187!1.96e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.95e-14;17!CL:0002518;5.95e-14;17!CL:1000449;2.21e-11;15!CL:0002139;1.21e-10;24!CL:0000071;3.23e-09;18!CL:0002078;7.69e-09;45!CL:0000115;8.58e-09;36!CL:0002681;8.60e-09;12!CL:0002584;8.60e-09;12!CL:1000507;1.15e-08;10!CL:1000494;1.15e-08;10!CL:0002539;1.22e-07;10!CL:0002543;3.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.49e-15,121;CL:1000497,8.34e-14,17;CL:0002518,8.34e-14,17;CL:0002078,1.24e-12,45;CL:1000449,3.02e-11,15;CL:0000115,7.71e-11,36;CL:0002139,9.81e-11,24;CL:0000071,1.75e-09,18;CL:0002546,1.75e-09,18;CL:0000213,4.29e-09,58;CL:0000215,4.29e-09,58;CL:1000507,7.79e-09,10;CL:1000494,7.79e-09,10;CL:0002681,1.33e-08,12;CL:0002584,1.33e-08,12;CL:0002539,9.12e-08,10;CL:0002543,1.88e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.23e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@HOXA4 | |||
}} |
Revision as of 00:43, 14 September 2013
Short description: | p2@HOXA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HOXA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511914_5end |
EntrezGene: | HOXA4 |
HGNC: | 5105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.49e-15 | 121 |
kidney cell | 8.34e-14 | 17 |
kidney epithelial cell | 8.34e-14 | 17 |
meso-epithelial cell | 1.24e-12 | 45 |
epithelial cell of nephron | 3.02e-11 | 15 |
endothelial cell | 7.71e-11 | 36 |
endothelial cell of vascular tree | 9.81e-11 | 24 |
blood vessel endothelial cell | 1.75e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.75e-09 | 18 |
lining cell | 4.29e-09 | 58 |
barrier cell | 4.29e-09 | 58 |
kidney tubule cell | 7.79e-09 | 10 |
nephron tubule epithelial cell | 7.79e-09 | 10 |
kidney cortical cell | 1.33e-08 | 12 |
renal cortical epithelial cell | 1.33e-08 | 12 |
aortic smooth muscle cell | 9.12e-08 | 10 |
vein endothelial cell | 1.88e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.