FFCP PHASE1:Mm9::chr3:152645204..152645215,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26938|HGNC=|MCL_coexpression_id=708|UniProt=Q6GTI0|association_with_transcript=0bp_to_ENSMUST00000044278_5end|description=CAGE_peak_2_at_St6galnac5_5end|id=chr3:152645204..152645215,-|ontology_enrichment_celltype=CL:0000117!8.59e-16!23;CL:0000337!8.59e-16!23;CL:0000540!4.65e-11!33;CL:0000047!4.65e-11!33;CL:0000031!4.65e-11!33;CL:0000404!4.65e-11!33;CL:0000393!1.23e-07!39;CL:0000211!1.23e-07!39;CL:0002319!2.65e-07!43;CL:0000221!6.80e-07!44;CL:0000133!6.80e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-28,23;CL:0000337,1.54e-28,23;CL:0000540,3.96e-18,33;CL:0000047,3.96e-18,33;CL:0000031,3.96e-18,33;CL:0000404,3.96e-18,33;CL:0000393,1.80e-14,39;CL:0000211,1.80e-14,39;CL:0002319,1.31e-12,43;CL:0000221,3.38e-12,44;CL:0000133,3.38e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.48e-26!71;UBERON:0003075!8.48e-26!71;UBERON:0007284!8.48e-26!71;UBERON:0001049!2.93e-24!52;UBERON:0005068!2.93e-24!52;UBERON:0006241!2.93e-24!52;UBERON:0007135!2.93e-24!52;UBERON:0000955!9.03e-24!50;UBERON:0006238!9.03e-24!50;UBERON:0000033!2.64e-23!63;UBERON:0002616!4.77e-23!49;UBERON:0001017!1.01e-22!73;UBERON:0005743!1.01e-22!73;UBERON:0004121!1.20e-22!102;UBERON:0000924!1.20e-22!102;UBERON:0006601!1.20e-22!102;UBERON:0002020!4.82e-22!34;UBERON:0000073!2.15e-21!75;UBERON:0001016!2.15e-21!75;UBERON:0003056!1.73e-20!49;UBERON:0003080!4.05e-19!40;UBERON:0002791!4.49e-19!29;UBERON:0003528!4.49e-19!29;UBERON:0001893!4.49e-19!29;UBERON:0002780!1.70e-18!39;UBERON:0001890!1.70e-18!39;UBERON:0006240!1.70e-18!39;UBERON:0000956!4.39e-13!21;UBERON:0001869!4.39e-13!21;UBERON:0000203!4.39e-13!21;UBERON:0007811!2.95e-11!86;UBERON:0002619!6.39e-11!17;UBERON:0000153!1.54e-10!94;UBERON:0002021!1.39e-08!10;UBERON:0000411!1.39e-08!10;UBERON:0001950!1.39e-08!10;UBERON:0002420!3.03e-07!8;UBERON:0007245!3.03e-07!8;UBERON:0010009!3.03e-07!8;UBERON:0010011!3.03e-07!8;UBERON:0000454!3.03e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-42,54;UBERON:0002020,1.12e-41,34;UBERON:0003528,1.33e-37,29;UBERON:0002791,1.33e-37,29;UBERON:0001893,1.33e-37,29;UBERON:0001017,1.01e-36,73;UBERON:0001049,1.29e-36,52;UBERON:0005068,1.29e-36,52;UBERON:0006241,1.29e-36,52;UBERON:0007135,1.29e-36,52;UBERON:0001016,1.88e-35,75;UBERON:0000955,1.55e-34,47;UBERON:0006238,1.55e-34,47;UBERON:0002616,4.57e-33,46;UBERON:0003080,3.73e-32,40;UBERON:0002780,8.00e-31,39;UBERON:0001890,8.00e-31,39;UBERON:0006240,8.00e-31,39;UBERON:0002346,6.09e-28,64;UBERON:0003075,6.09e-28,64;UBERON:0007284,6.09e-28,64;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0003056,9.69e-25,49;UBERON:0000956,2.77e-24,21;UBERON:0001869,2.77e-24,21;UBERON:0000203,2.77e-24,21;UBERON:0010371,2.58e-23,73;UBERON:0002619,1.14e-21,17;UBERON:0002021,2.48e-17,10;UBERON:0000411,2.48e-17,10;UBERON:0001950,2.48e-17,10;UBERON:0010314,1.53e-16,92;UBERON:0002420,2.44e-14,8;UBERON:0007245,2.44e-14,8;UBERON:0010009,2.44e-14,8;UBERON:0010011,2.44e-14,8;UBERON:0000454,2.44e-14,8;UBERON:0000025,1.47e-11,114;UBERON:0004111,3.33e-10,122;UBERON:0000369,3.41e-10,5;UBERON:0002435,3.41e-10,5;UBERON:0000204,3.41e-10,5;UBERON:0010082,3.41e-10,5;UBERON:0011216,9.75e-08,194;UBERON:0002950,5.25e-07,4;UBERON:0001891,5.25e-07,4;UBERON:0009616,5.25e-07,4;UBERON:0010286,5.25e-07,4|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.388859798148567,0,0,0,0,0,0,0,0,4.65327859977075,3.70293685490423,5.07065122804943,0,0,0,0,0,0,0,1.03689612308478,1.21505344498522,0.630974884054146,1.42825492201902,0.883474163806454,2.57230678351403,2.20444583341944,1.83843757322004,4.40463523997555,4.72443150915195,3.84016333140609,5.40733779693795,4.48289453651807,6.25096044668112,2.51264699101243,2.25105044012672,3.66715794664344,1.47314292736834,2.27794689278565,2.42319279572891,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.705532242814229,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,1.9472783122627,5.03250663100489,6.53402630986895,8.8650403298061,5.8814555185976,2.90903262383384,4.54275536589721,0,0.124406970610093,0,0.420883711772948,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.408218994907967,0.12811372028485,0.374806898238915,0.517406741478031,0,0.567318240503458,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6129059365661,9.36431972651488,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.1576351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| ||
|EntrezGene=26938 | |||
|HGNC= | |||
|MCL_coexpression_id=708 | |||
|UniProt=Q6GTI0 | |||
|association_with_transcript=0bp_to_ENSMUST00000044278_5end | |||
|description=CAGE_peak_2_at_St6galnac5_5end | |||
|id=chr3:152645204..152645215,- | |||
|ontology_enrichment_celltype=CL:0000117!8.59e-16!23;CL:0000337!8.59e-16!23;CL:0000540!4.65e-11!33;CL:0000047!4.65e-11!33;CL:0000031!4.65e-11!33;CL:0000404!4.65e-11!33;CL:0000393!1.23e-07!39;CL:0000211!1.23e-07!39;CL:0002319!2.65e-07!43;CL:0000221!6.80e-07!44;CL:0000133!6.80e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-28,23;CL:0000337,1.54e-28,23;CL:0000540,3.96e-18,33;CL:0000047,3.96e-18,33;CL:0000031,3.96e-18,33;CL:0000404,3.96e-18,33;CL:0000393,1.80e-14,39;CL:0000211,1.80e-14,39;CL:0002319,1.31e-12,43;CL:0000221,3.38e-12,44;CL:0000133,3.38e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.48e-26!71;UBERON:0003075!8.48e-26!71;UBERON:0007284!8.48e-26!71;UBERON:0001049!2.93e-24!52;UBERON:0005068!2.93e-24!52;UBERON:0006241!2.93e-24!52;UBERON:0007135!2.93e-24!52;UBERON:0000955!9.03e-24!50;UBERON:0006238!9.03e-24!50;UBERON:0000033!2.64e-23!63;UBERON:0002616!4.77e-23!49;UBERON:0001017!1.01e-22!73;UBERON:0005743!1.01e-22!73;UBERON:0004121!1.20e-22!102;UBERON:0000924!1.20e-22!102;UBERON:0006601!1.20e-22!102;UBERON:0002020!4.82e-22!34;UBERON:0000073!2.15e-21!75;UBERON:0001016!2.15e-21!75;UBERON:0003056!1.73e-20!49;UBERON:0003080!4.05e-19!40;UBERON:0002791!4.49e-19!29;UBERON:0003528!4.49e-19!29;UBERON:0001893!4.49e-19!29;UBERON:0002780!1.70e-18!39;UBERON:0001890!1.70e-18!39;UBERON:0006240!1.70e-18!39;UBERON:0000956!4.39e-13!21;UBERON:0001869!4.39e-13!21;UBERON:0000203!4.39e-13!21;UBERON:0007811!2.95e-11!86;UBERON:0002619!6.39e-11!17;UBERON:0000153!1.54e-10!94;UBERON:0002021!1.39e-08!10;UBERON:0000411!1.39e-08!10;UBERON:0001950!1.39e-08!10;UBERON:0002420!3.03e-07!8;UBERON:0007245!3.03e-07!8;UBERON:0010009!3.03e-07!8;UBERON:0010011!3.03e-07!8;UBERON:0000454!3.03e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-42,54;UBERON:0002020,1.12e-41,34;UBERON:0003528,1.33e-37,29;UBERON:0002791,1.33e-37,29;UBERON:0001893,1.33e-37,29;UBERON:0001017,1.01e-36,73;UBERON:0001049,1.29e-36,52;UBERON:0005068,1.29e-36,52;UBERON:0006241,1.29e-36,52;UBERON:0007135,1.29e-36,52;UBERON:0001016,1.88e-35,75;UBERON:0000955,1.55e-34,47;UBERON:0006238,1.55e-34,47;UBERON:0002616,4.57e-33,46;UBERON:0003080,3.73e-32,40;UBERON:0002780,8.00e-31,39;UBERON:0001890,8.00e-31,39;UBERON:0006240,8.00e-31,39;UBERON:0002346,6.09e-28,64;UBERON:0003075,6.09e-28,64;UBERON:0007284,6.09e-28,64;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0003056,9.69e-25,49;UBERON:0000956,2.77e-24,21;UBERON:0001869,2.77e-24,21;UBERON:0000203,2.77e-24,21;UBERON:0010371,2.58e-23,73;UBERON:0002619,1.14e-21,17;UBERON:0002021,2.48e-17,10;UBERON:0000411,2.48e-17,10;UBERON:0001950,2.48e-17,10;UBERON:0010314,1.53e-16,92;UBERON:0002420,2.44e-14,8;UBERON:0007245,2.44e-14,8;UBERON:0010009,2.44e-14,8;UBERON:0010011,2.44e-14,8;UBERON:0000454,2.44e-14,8;UBERON:0000025,1.47e-11,114;UBERON:0004111,3.33e-10,122;UBERON:0000369,3.41e-10,5;UBERON:0002435,3.41e-10,5;UBERON:0000204,3.41e-10,5;UBERON:0010082,3.41e-10,5;UBERON:0011216,9.75e-08,194;UBERON:0002950,5.25e-07,4;UBERON:0001891,5.25e-07,4;UBERON:0009616,5.25e-07,4;UBERON:0010286,5.25e-07,4 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.388859798148567,0,0,0,0,0,0,0,0,4.65327859977075,3.70293685490423,5.07065122804943,0,0,0,0,0,0,0,1.03689612308478,1.21505344498522,0.630974884054146,1.42825492201902,0.883474163806454,2.57230678351403,2.20444583341944,1.83843757322004,4.40463523997555,4.72443150915195,3.84016333140609,5.40733779693795,4.48289453651807,6.25096044668112,2.51264699101243,2.25105044012672,3.66715794664344,1.47314292736834,2.27794689278565,2.42319279572891,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.705532242814229,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,1.9472783122627,5.03250663100489,6.53402630986895,8.8650403298061,5.8814555185976,2.90903262383384,4.54275536589721,0,0.124406970610093,0,0.420883711772948,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.408218994907967,0.12811372028485,0.374806898238915,0.517406741478031,0,0.567318240503458,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6129059365661,9.36431972651488,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,1.12385412991454,1.64096361229084,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0,3.53453448063988,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.517434735131018,0,0.532020700926821,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0.8244312647074,0.161464426695906,0.120625849856312,0.119372344003136,0.492422699235184,0,0.556275906031529,0,0.619160603889667,1.29636169158798,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,5.0827665835536,5.06357760157895,2.29158205375759,4.46818274093588,2.05524755931193,5.2877572817279,5.40018000185445,4.95353323546643,4.98456649882625,3.62432218226274,0.415149390336707,0.399024873401031,0.682934423016537,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,2.24643446714271,1.51618327058278,0.760437899670719,1.13175804831646,0.280924522409647,0.832326981263301,0.746661096422973,1.42888107384922,0.347652977834566,0.964546102318525,0.412085900803307,1.47198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.09998990259179,0.73171189149109,1.05227884575137,0.135804113845862,0,0.474540072496697,0.591026894253381,0.818462086339379,0.619747364743864,0,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0.882365676478062,0.231867835620421 | |||
|short_description=p2@St6galnac5 | |||
}} |
Revision as of 01:52, 14 September 2013
Short description: | p2@St6galnac5 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_St6galnac5_5end |
Coexpression cluster: | MCL_coexpression_mm9:708 |
Association with transcript: | 0bp_to_ENSMUST00000044278_5end |
EntrezGene: | St6galnac5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-28 | 23 |
neuron | 3.96e-18 | 33 |
neuronal stem cell | 3.96e-18 | 33 |
neuroblast | 3.96e-18 | 33 |
electrically signaling cell | 3.96e-18 | 33 |
electrically responsive cell | 1.80e-14 | 39 |
electrically active cell | 1.80e-14 | 39 |
neural cell | 1.31e-12 | 43 |
ectodermal cell | 3.38e-12 | 44 |
neurectodermal cell | 3.38e-12 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.