FFCP PHASE1:Mm9::chr4:34432983..34433015,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=308|UniProt=|association_with_transcript=-65bp_to_ENSMUST00000117487_5end|description=CAGE_peak_2_at_ENSMUST00000117487_5end|id=chr4:34432983..34433015,+|ontology_enrichment_celltype=CL:0000063!1.42e-27!66;CL:0000144!3.85e-18!121;CL:0000012!3.85e-18!121;CL:0002371!1.56e-16!118;CL:0000548!7.07e-15!115;CL:0000004!7.07e-15!115;CL:0000255!7.07e-15!115;CL:0000066!2.31e-13!25;CL:0002076!3.07e-13!15;CL:0000988!3.36e-13!32;CL:0002032!3.36e-13!32;CL:0000037!3.36e-13!32;CL:0000566!3.36e-13!32;CL:0000837!3.36e-13!32;CL:0002320!1.91e-12!46;CL:0000134!1.91e-12!46;CL:0000219!1.14e-11!54;CL:0002031!2.50e-10!25;CL:0000223!6.07e-10!20;CL:0000738!1.66e-09!17;CL:0002087!1.66e-09!17;CL:0000542!1.97e-09!13;CL:0000051!1.97e-09!13;CL:0000838!4.04e-09!12;CL:0000791!1.33e-08!9;CL:0000789!1.33e-08!9;CL:0002420!1.33e-08!9;CL:0002419!1.33e-08!9;CL:0000790!1.33e-08!9;CL:0000034!1.53e-08!97;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000624!7.49e-08!8;CL:0002563!1.33e-07!9;CL:0002251!1.33e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,7.61e-20,25;CL:0000988,5.44e-19,32;CL:0002032,5.44e-19,32;CL:0000037,5.44e-19,32;CL:0000837,5.44e-19,32;CL:0002076,1.12e-18,15;CL:0002320,6.36e-17,46;CL:0000134,6.36e-17,46;CL:0002031,6.40e-16,25;CL:0000219,9.69e-16,54;CL:0000223,8.98e-15,20;CL:0000838,6.44e-13,12;CL:0000034,1.51e-12,97;CL:0000738,1.98e-12,17;CL:0002087,1.98e-12,17;CL:0000791,6.95e-12,9;CL:0000789,6.95e-12,9;CL:0002420,6.95e-12,9;CL:0002419,6.95e-12,9;CL:0000790,6.95e-12,9;CL:0000542,1.05e-11,13;CL:0000051,1.05e-11,13;CL:0000084,1.32e-11,11;CL:0000827,1.32e-11,11;CL:0000624,8.74e-11,8;CL:0002563,2.01e-10,9;CL:0002251,2.01e-10,9;CL:0000723,3.02e-09,91;CL:0000048,3.02e-09,91;CL:0000075,4.84e-09,7;CL:0000049,7.41e-09,19;CL:0000239,2.89e-08,6;CL:0000677,2.89e-08,6;CL:0000584,2.89e-08,6;CL:0000893,4.59e-08,6;CL:0002489,4.59e-08,6;CL:0000898,4.59e-08,6;CL:0000809,4.59e-08,6;CL:0000810,4.59e-08,6;CL:0000895,4.59e-08,6;CL:0000808,4.59e-08,6;CL:0000894,4.59e-08,6;CL:0000806,4.59e-08,6;CL:0000807,4.59e-08,6;CL:0000805,4.59e-08,6;CL:0002425,4.59e-08,6;CL:0002436,4.59e-08,6;CL:0002427,4.59e-08,6;CL:0002428,4.59e-08,6;CL:0002429,4.59e-08,6;CL:0002433,4.59e-08,6;CL:0002431,4.59e-08,6;CL:0002432,4.59e-08,6;CL:0000553,9.11e-07,6;CL:0000556,9.11e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.91e-12!46;UBERON:0000344!5.59e-11!15;UBERON:0001242!4.84e-09!13;UBERON:0000060!4.84e-09!13;UBERON:0001262!4.84e-09!13;UBERON:0004786!4.84e-09!13;UBERON:0000485!1.05e-08!11;UBERON:0003350!1.33e-07!9;UBERON:0004808!1.33e-07!9;UBERON:0001277!1.33e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.36e-17,46;UBERON:0000344,1.22e-15,15;UBERON:0001242,8.62e-13,13;UBERON:0001262,8.62e-13,13;UBERON:0004786,8.62e-13,13;UBERON:0000485,4.95e-12,11;UBERON:0003350,2.01e-10,9;UBERON:0004808,2.01e-10,9;UBERON:0001277,2.01e-10,9;UBERON:0004923,2.17e-08,24;UBERON:0002193,6.54e-08,48;UBERON:0002405,6.54e-08,48|phase1_expression=2.7225304007815,3.83872948403297,6.3699893514535,8.77146212789807,8.01433167914156,4.53274034162102,11.4470193891808,13.8161956082487,2.67498572088167,5.85161315804984,5.82141091966717,7.8974437405383,8.04643430676667,11.7143339241457,0,9.92128810210147,15.3903613188192,9.93705820878449,8.91243818437302,11.0341309467488,0.0850432901510698,0,7.31359409589019,12.1594241322989,14.9116032693661,6.31655160526522,10.7690499039769,5.38678081714723,12.9215925230334,6.5527833737582,7.53883736228036,0,0,0,2.3108129580102,1.49611180822643,2.04169356262369,2.92972141515835,3.1253413780952,4.18818995179039,2.94115744015507,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0.139986421625363,0,10.5703041816374,9.42970784614748,6.38578218370682,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,6.20954785332109,5.36558076758177,3.76823835312181,12.0459342777394,0,0,0,0,0,0.170430322578058,9.61208217030615,16.2536204274756,2.67602497575693,19.2489716121477,12.7402619853323,14.2213340630666,9.30911476348221,10.1343946190039,8.59391556525132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,3.83408398418945,5.39912457894067,3.55796635804581,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0.360124259610698,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.80885274925294,5.91900186363845,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,13.5712155545345,16.86107619838,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,3.22959016988325,1.11961161858926,2.21119958087078,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,3.32978930061097,1.43542170575161,2.3503846290971,0,0,0,0,0,0,0,0.572895513439397,9.28007184655913,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p2@ENSMUST00000117487}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=308 | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_ENSMUST00000117487_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000117487_5end | |||
|id=chr4:34432983..34433015,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.42e-27!66;CL:0000144!3.85e-18!121;CL:0000012!3.85e-18!121;CL:0002371!1.56e-16!118;CL:0000548!7.07e-15!115;CL:0000004!7.07e-15!115;CL:0000255!7.07e-15!115;CL:0000066!2.31e-13!25;CL:0002076!3.07e-13!15;CL:0000988!3.36e-13!32;CL:0002032!3.36e-13!32;CL:0000037!3.36e-13!32;CL:0000566!3.36e-13!32;CL:0000837!3.36e-13!32;CL:0002320!1.91e-12!46;CL:0000134!1.91e-12!46;CL:0000219!1.14e-11!54;CL:0002031!2.50e-10!25;CL:0000223!6.07e-10!20;CL:0000738!1.66e-09!17;CL:0002087!1.66e-09!17;CL:0000542!1.97e-09!13;CL:0000051!1.97e-09!13;CL:0000838!4.04e-09!12;CL:0000791!1.33e-08!9;CL:0000789!1.33e-08!9;CL:0002420!1.33e-08!9;CL:0002419!1.33e-08!9;CL:0000790!1.33e-08!9;CL:0000034!1.53e-08!97;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000624!7.49e-08!8;CL:0002563!1.33e-07!9;CL:0002251!1.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.61e-20,25;CL:0000988,5.44e-19,32;CL:0002032,5.44e-19,32;CL:0000037,5.44e-19,32;CL:0000837,5.44e-19,32;CL:0002076,1.12e-18,15;CL:0002320,6.36e-17,46;CL:0000134,6.36e-17,46;CL:0002031,6.40e-16,25;CL:0000219,9.69e-16,54;CL:0000223,8.98e-15,20;CL:0000838,6.44e-13,12;CL:0000034,1.51e-12,97;CL:0000738,1.98e-12,17;CL:0002087,1.98e-12,17;CL:0000791,6.95e-12,9;CL:0000789,6.95e-12,9;CL:0002420,6.95e-12,9;CL:0002419,6.95e-12,9;CL:0000790,6.95e-12,9;CL:0000542,1.05e-11,13;CL:0000051,1.05e-11,13;CL:0000084,1.32e-11,11;CL:0000827,1.32e-11,11;CL:0000624,8.74e-11,8;CL:0002563,2.01e-10,9;CL:0002251,2.01e-10,9;CL:0000723,3.02e-09,91;CL:0000048,3.02e-09,91;CL:0000075,4.84e-09,7;CL:0000049,7.41e-09,19;CL:0000239,2.89e-08,6;CL:0000677,2.89e-08,6;CL:0000584,2.89e-08,6;CL:0000893,4.59e-08,6;CL:0002489,4.59e-08,6;CL:0000898,4.59e-08,6;CL:0000809,4.59e-08,6;CL:0000810,4.59e-08,6;CL:0000895,4.59e-08,6;CL:0000808,4.59e-08,6;CL:0000894,4.59e-08,6;CL:0000806,4.59e-08,6;CL:0000807,4.59e-08,6;CL:0000805,4.59e-08,6;CL:0002425,4.59e-08,6;CL:0002436,4.59e-08,6;CL:0002427,4.59e-08,6;CL:0002428,4.59e-08,6;CL:0002429,4.59e-08,6;CL:0002433,4.59e-08,6;CL:0002431,4.59e-08,6;CL:0002432,4.59e-08,6;CL:0000553,9.11e-07,6;CL:0000556,9.11e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.91e-12!46;UBERON:0000344!5.59e-11!15;UBERON:0001242!4.84e-09!13;UBERON:0000060!4.84e-09!13;UBERON:0001262!4.84e-09!13;UBERON:0004786!4.84e-09!13;UBERON:0000485!1.05e-08!11;UBERON:0003350!1.33e-07!9;UBERON:0004808!1.33e-07!9;UBERON:0001277!1.33e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.36e-17,46;UBERON:0000344,1.22e-15,15;UBERON:0001242,8.62e-13,13;UBERON:0001262,8.62e-13,13;UBERON:0004786,8.62e-13,13;UBERON:0000485,4.95e-12,11;UBERON:0003350,2.01e-10,9;UBERON:0004808,2.01e-10,9;UBERON:0001277,2.01e-10,9;UBERON:0004923,2.17e-08,24;UBERON:0002193,6.54e-08,48;UBERON:0002405,6.54e-08,48 | |||
|phase1_expression=2.7225304007815,3.83872948403297,6.3699893514535,8.77146212789807,8.01433167914156,4.53274034162102,11.4470193891808,13.8161956082487,2.67498572088167,5.85161315804984,5.82141091966717,7.8974437405383,8.04643430676667,11.7143339241457,0,9.92128810210147,15.3903613188192,9.93705820878449,8.91243818437302,11.0341309467488,0.0850432901510698,0,7.31359409589019,12.1594241322989,14.9116032693661,6.31655160526522,10.7690499039769,5.38678081714723,12.9215925230334,6.5527833737582,7.53883736228036,0,0,0,2.3108129580102,1.49611180822643,2.04169356262369,2.92972141515835,3.1253413780952,4.18818995179039,2.94115744015507,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0.139986421625363,0,10.5703041816374,9.42970784614748,6.38578218370682,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,6.20954785332109,5.36558076758177,3.76823835312181,12.0459342777394,0,0,0,0,0,0.170430322578058,9.61208217030615,16.2536204274756,2.67602497575693,19.2489716121477,12.7402619853323,14.2213340630666,9.30911476348221,10.1343946190039,8.59391556525132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,3.83408398418945,5.39912457894067,3.55796635804581,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0.360124259610698,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.80885274925294,5.91900186363845,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,13.5712155545345,16.86107619838,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,3.22959016988325,1.11961161858926,2.21119958087078,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,3.32978930061097,1.43542170575161,2.3503846290971,0,0,0,0,0,0,0,0.572895513439397,9.28007184655913,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p2@ENSMUST00000117487 | |||
}} |
Revision as of 04:53, 14 September 2013
Short description: | p2@ENSMUST00000117487 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000117487_5end |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | -65bp_to_ENSMUST00000117487_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.36e-17 | 46 |
mucosa | 1.22e-15 | 15 |
intestinal mucosa | 8.62e-13 | 13 |
wall of intestine | 8.62e-13 | 13 |
gastrointestinal system mucosa | 8.62e-13 | 13 |
simple columnar epithelium | 4.95e-12 | 11 |
epithelium of mucosa | 2.01e-10 | 9 |
gastrointestinal system epithelium | 2.01e-10 | 9 |
intestinal epithelium | 2.01e-10 | 9 |
organ component layer | 2.17e-08 | 24 |
hemolymphoid system | 6.54e-08 | 48 |
immune system | 6.54e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.