FFCP PHASE1:Mm9::chr8:116813265..116813288,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1052|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:116813265..116813288,+|id=chr8:116813265..116813288,+|ontology_enrichment_celltype=CL:0002319!2.51e-22!43;CL:0000540!6.64e-22!33;CL:0000047!6.64e-22!33;CL:0000031!6.64e-22!33;CL:0000404!6.64e-22!33;CL:0000221!1.65e-21!44;CL:0000133!1.65e-21!44;CL:0000117!6.41e-19!23;CL:0000337!6.41e-19!23;CL:0000055!2.51e-17!50;CL:0000393!9.07e-17!39;CL:0000211!9.07e-17!39;CL:0002321!6.70e-09!70;CL:0000220!6.70e-09!70|ontology_enrichment_celltype_v019_2=CL:0000117,8.05e-40,23;CL:0000337,8.05e-40,23;CL:0000540,5.03e-27,33;CL:0000047,5.03e-27,33;CL:0000031,5.03e-27,33;CL:0000404,5.03e-27,33;CL:0002319,3.47e-23,43;CL:0000221,1.34e-22,44;CL:0000133,1.34e-22,44;CL:0000393,1.73e-22,39;CL:0000211,1.73e-22,39;CL:0002614,2.69e-14,3;CL:0002612,5.99e-14,3;CL:0002321,3.26e-13,70;CL:0002613,6.81e-13,3;CL:0002611,6.10e-10,2;CL:0000723,3.58e-08,91;CL:0000048,3.58e-08,91;CL:0000034,1.67e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.98e-28!73;UBERON:0005743!3.98e-28!73;UBERON:0000073!8.25e-28!75;UBERON:0001016!8.25e-28!75;UBERON:0004121!2.34e-27!102;UBERON:0000924!2.34e-27!102;UBERON:0006601!2.34e-27!102;UBERON:0002346!8.25e-24!71;UBERON:0003075!8.25e-24!71;UBERON:0007284!8.25e-24!71;UBERON:0001049!2.16e-19!52;UBERON:0005068!2.16e-19!52;UBERON:0006241!2.16e-19!52;UBERON:0007135!2.16e-19!52;UBERON:0000033!1.39e-16!63;UBERON:0000955!1.22e-15!50;UBERON:0006238!1.22e-15!50;UBERON:0002616!4.76e-15!49;UBERON:0002020!1.29e-13!34;UBERON:0003056!3.88e-13!49;UBERON:0003080!4.20e-12!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0002791!2.78e-09!29;UBERON:0003528!2.78e-09!29;UBERON:0001893!2.78e-09!29;UBERON:0002420!4.58e-09!8;UBERON:0007245!4.58e-09!8;UBERON:0010009!4.58e-09!8;UBERON:0010011!4.58e-09!8;UBERON:0000454!4.58e-09!8;UBERON:0003076!1.28e-08!12;UBERON:0003057!1.28e-08!12;UBERON:0007811!1.57e-08!86;UBERON:0002240!1.11e-07!6;UBERON:0005174!1.11e-07!6;UBERON:0001137!1.11e-07!6;UBERON:0000153!2.30e-07!94;UBERON:0002298!3.15e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.01e-26,6;UBERON:0005174,4.01e-26,6;UBERON:0001137,4.01e-26,6;UBERON:0002420,1.46e-25,8;UBERON:0007245,1.46e-25,8;UBERON:0010009,1.46e-25,8;UBERON:0010011,1.46e-25,8;UBERON:0000454,1.46e-25,8;UBERON:0001017,6.62e-23,73;UBERON:0000073,8.16e-23,54;UBERON:0002020,1.13e-22,34;UBERON:0001948,3.16e-22,5;UBERON:0002315,3.16e-22,5;UBERON:0001016,3.24e-22,75;UBERON:0003076,4.29e-22,12;UBERON:0003057,4.29e-22,12;UBERON:0001049,3.54e-21,52;UBERON:0005068,3.54e-21,52;UBERON:0006241,3.54e-21,52;UBERON:0007135,3.54e-21,52;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,1.09e-16,64;UBERON:0003075,1.09e-16,64;UBERON:0007284,1.09e-16,64;UBERON:0002038,2.69e-14,3;UBERON:0009663,2.69e-14,3;UBERON:0009661,2.69e-14,3;UBERON:0000125,2.69e-14,3;UBERON:0002308,2.69e-14,3;UBERON:0010371,2.77e-14,73;UBERON:0002257,5.99e-14,3;UBERON:0000369,2.29e-13,5;UBERON:0002435,2.29e-13,5;UBERON:0000204,2.29e-13,5;UBERON:0010082,2.29e-13,5;UBERON:0002950,7.61e-11,4;UBERON:0001891,7.61e-11,4;UBERON:0009616,7.61e-11,4;UBERON:0010286,7.61e-11,4;UBERON:0010314,9.59e-11,92;UBERON:0003528,1.21e-10,29;UBERON:0002791,1.21e-10,29;UBERON:0001893,1.21e-10,29;UBERON:0002256,6.10e-10,2;UBERON:0002616,2.23e-09,46;UBERON:0000955,3.86e-09,47;UBERON:0006238,3.86e-09,47;UBERON:0000025,4.15e-08,114;UBERON:0002780,1.41e-07,39;UBERON:0001890,1.41e-07,39;UBERON:0006240,1.41e-07,39;UBERON:0004111,2.21e-07,122;UBERON:0003080,2.35e-07,40;UBERON:0000489,4.18e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,2.52758868796568,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,3.70293685490423,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,3.14216082844184,2.65042249141936,0.367472397644862,0.191690942036473,0.919218786610021,0,1.0214987046815,1.38245879930619,1.31886287730194,2.01272815925301,1.04182674111352,5.02529398202486,2.25105044012672,3.66715794664344,2.94628585473668,3.41692033917847,1.86399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,1.46612694769419,0.255457055208591,0,0,0,0.599162557619291,1.37250180845588,0.376963056338593,0,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.80275294993896,1.05490517932983,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0.790575555893047,0.321321316421807,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0,0.329098041204242,0,0,0,0.220528398054962,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0,0,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0.476872379894642,0,0,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0,0,0.231867835620421|short_description=p@chr8:116813265..116813288,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1052 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:116813265..116813288,+ | |||
|id=chr8:116813265..116813288,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.51e-22!43;CL:0000540!6.64e-22!33;CL:0000047!6.64e-22!33;CL:0000031!6.64e-22!33;CL:0000404!6.64e-22!33;CL:0000221!1.65e-21!44;CL:0000133!1.65e-21!44;CL:0000117!6.41e-19!23;CL:0000337!6.41e-19!23;CL:0000055!2.51e-17!50;CL:0000393!9.07e-17!39;CL:0000211!9.07e-17!39;CL:0002321!6.70e-09!70;CL:0000220!6.70e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.05e-40,23;CL:0000337,8.05e-40,23;CL:0000540,5.03e-27,33;CL:0000047,5.03e-27,33;CL:0000031,5.03e-27,33;CL:0000404,5.03e-27,33;CL:0002319,3.47e-23,43;CL:0000221,1.34e-22,44;CL:0000133,1.34e-22,44;CL:0000393,1.73e-22,39;CL:0000211,1.73e-22,39;CL:0002614,2.69e-14,3;CL:0002612,5.99e-14,3;CL:0002321,3.26e-13,70;CL:0002613,6.81e-13,3;CL:0002611,6.10e-10,2;CL:0000723,3.58e-08,91;CL:0000048,3.58e-08,91;CL:0000034,1.67e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.98e-28!73;UBERON:0005743!3.98e-28!73;UBERON:0000073!8.25e-28!75;UBERON:0001016!8.25e-28!75;UBERON:0004121!2.34e-27!102;UBERON:0000924!2.34e-27!102;UBERON:0006601!2.34e-27!102;UBERON:0002346!8.25e-24!71;UBERON:0003075!8.25e-24!71;UBERON:0007284!8.25e-24!71;UBERON:0001049!2.16e-19!52;UBERON:0005068!2.16e-19!52;UBERON:0006241!2.16e-19!52;UBERON:0007135!2.16e-19!52;UBERON:0000033!1.39e-16!63;UBERON:0000955!1.22e-15!50;UBERON:0006238!1.22e-15!50;UBERON:0002616!4.76e-15!49;UBERON:0002020!1.29e-13!34;UBERON:0003056!3.88e-13!49;UBERON:0003080!4.20e-12!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0002791!2.78e-09!29;UBERON:0003528!2.78e-09!29;UBERON:0001893!2.78e-09!29;UBERON:0002420!4.58e-09!8;UBERON:0007245!4.58e-09!8;UBERON:0010009!4.58e-09!8;UBERON:0010011!4.58e-09!8;UBERON:0000454!4.58e-09!8;UBERON:0003076!1.28e-08!12;UBERON:0003057!1.28e-08!12;UBERON:0007811!1.57e-08!86;UBERON:0002240!1.11e-07!6;UBERON:0005174!1.11e-07!6;UBERON:0001137!1.11e-07!6;UBERON:0000153!2.30e-07!94;UBERON:0002298!3.15e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.01e-26,6;UBERON:0005174,4.01e-26,6;UBERON:0001137,4.01e-26,6;UBERON:0002420,1.46e-25,8;UBERON:0007245,1.46e-25,8;UBERON:0010009,1.46e-25,8;UBERON:0010011,1.46e-25,8;UBERON:0000454,1.46e-25,8;UBERON:0001017,6.62e-23,73;UBERON:0000073,8.16e-23,54;UBERON:0002020,1.13e-22,34;UBERON:0001948,3.16e-22,5;UBERON:0002315,3.16e-22,5;UBERON:0001016,3.24e-22,75;UBERON:0003076,4.29e-22,12;UBERON:0003057,4.29e-22,12;UBERON:0001049,3.54e-21,52;UBERON:0005068,3.54e-21,52;UBERON:0006241,3.54e-21,52;UBERON:0007135,3.54e-21,52;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,1.09e-16,64;UBERON:0003075,1.09e-16,64;UBERON:0007284,1.09e-16,64;UBERON:0002038,2.69e-14,3;UBERON:0009663,2.69e-14,3;UBERON:0009661,2.69e-14,3;UBERON:0000125,2.69e-14,3;UBERON:0002308,2.69e-14,3;UBERON:0010371,2.77e-14,73;UBERON:0002257,5.99e-14,3;UBERON:0000369,2.29e-13,5;UBERON:0002435,2.29e-13,5;UBERON:0000204,2.29e-13,5;UBERON:0010082,2.29e-13,5;UBERON:0002950,7.61e-11,4;UBERON:0001891,7.61e-11,4;UBERON:0009616,7.61e-11,4;UBERON:0010286,7.61e-11,4;UBERON:0010314,9.59e-11,92;UBERON:0003528,1.21e-10,29;UBERON:0002791,1.21e-10,29;UBERON:0001893,1.21e-10,29;UBERON:0002256,6.10e-10,2;UBERON:0002616,2.23e-09,46;UBERON:0000955,3.86e-09,47;UBERON:0006238,3.86e-09,47;UBERON:0000025,4.15e-08,114;UBERON:0002780,1.41e-07,39;UBERON:0001890,1.41e-07,39;UBERON:0006240,1.41e-07,39;UBERON:0004111,2.21e-07,122;UBERON:0003080,2.35e-07,40;UBERON:0000489,4.18e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,2.52758868796568,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,3.70293685490423,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,3.14216082844184,2.65042249141936,0.367472397644862,0.191690942036473,0.919218786610021,0,1.0214987046815,1.38245879930619,1.31886287730194,2.01272815925301,1.04182674111352,5.02529398202486,2.25105044012672,3.66715794664344,2.94628585473668,3.41692033917847,1.86399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,1.46612694769419,0.255457055208591,0,0,0,0.599162557619291,1.37250180845588,0.376963056338593,0,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.80275294993896,1.05490517932983,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0.790575555893047,0.321321316421807,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0,0.329098041204242,0,0,0,0.220528398054962,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0,0,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0.476872379894642,0,0,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr8:116813265..116813288,+ | |||
}} |
Revision as of 14:50, 14 September 2013
Short description: | p@chr8:116813265..116813288, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:116813265..116813288, + |
Coexpression cluster: | MCL_coexpression_mm9:1052 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.05e-40 | 23 |
neuroblast (sensu Vertebrata) | 8.05e-40 | 23 |
neuron | 5.03e-27 | 33 |
neuronal stem cell | 5.03e-27 | 33 |
neuroblast | 5.03e-27 | 33 |
electrically signaling cell | 5.03e-27 | 33 |
neural cell | 3.47e-23 | 43 |
ectodermal cell | 1.34e-22 | 44 |
neurectodermal cell | 1.34e-22 | 44 |
electrically responsive cell | 1.73e-22 | 39 |
electrically active cell | 1.73e-22 | 39 |
neuron of the substantia nigra | 2.69e-14 | 3 |
neuron of the ventral spinal cord | 5.99e-14 | 3 |
embryonic cell | 3.26e-13 | 70 |
striatum neuron | 6.81e-13 | 3 |
neuron of the dorsal spinal cord | 6.10e-10 | 2 |
somatic stem cell | 3.58e-08 | 91 |
multi fate stem cell | 3.58e-08 | 91 |
stem cell | 1.67e-07 | 97 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.