FFCP PHASE1:Mm9::chr9:44795268..44795283,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:44795268..44795283,-|id=chr9:44795268..44795283,-|ontology_enrichment_celltype=CL:0000838!2.45e-20!12;CL:0000084!8.77e-19!11;CL:0000827!8.77e-19!11;CL:0000542!1.66e-18!13;CL:0000051!1.66e-18!13;CL:0000791!4.38e-16!9;CL:0000789!4.38e-16!9;CL:0002420!4.38e-16!9;CL:0002419!4.38e-16!9;CL:0000790!4.38e-16!9;CL:0000988!8.38e-15!32;CL:0002032!8.38e-15!32;CL:0000037!8.38e-15!32;CL:0000566!8.38e-15!32;CL:0000837!8.38e-15!32;CL:0000624!1.33e-14!8;CL:0002031!1.64e-14!25;CL:0000738!2.39e-13!17;CL:0002087!2.39e-13!17;CL:0000893!1.77e-11!6;CL:0002489!1.77e-11!6;CL:0000898!1.77e-11!6;CL:0000809!1.77e-11!6;CL:0000810!1.77e-11!6;CL:0000895!1.77e-11!6;CL:0000808!1.77e-11!6;CL:0000894!1.77e-11!6;CL:0000806!1.77e-11!6;CL:0000807!1.77e-11!6;CL:0000805!1.77e-11!6;CL:0002425!1.77e-11!6;CL:0002436!1.77e-11!6;CL:0002427!1.77e-11!6;CL:0002428!1.77e-11!6;CL:0002429!1.77e-11!6;CL:0002433!1.77e-11!6;CL:0002431!1.77e-11!6;CL:0002432!1.77e-11!6;CL:0002320!8.71e-10!46;CL:0000134!8.71e-10!46;CL:0000219!2.19e-08!54|ontology_enrichment_celltype_v019_2=CL:0000791,2.28e-36,9;CL:0000789,2.28e-36,9;CL:0002420,2.28e-36,9;CL:0002419,2.28e-36,9;CL:0000790,2.28e-36,9;CL:0000838,3.74e-33,12;CL:0000624,8.52e-33,8;CL:0000542,1.74e-30,13;CL:0000051,1.74e-30,13;CL:0000084,1.58e-29,11;CL:0000827,1.58e-29,11;CL:0000893,2.73e-25,6;CL:0002489,2.73e-25,6;CL:0000898,2.73e-25,6;CL:0000809,2.73e-25,6;CL:0000810,2.73e-25,6;CL:0000895,2.73e-25,6;CL:0000808,2.73e-25,6;CL:0000894,2.73e-25,6;CL:0000806,2.73e-25,6;CL:0000807,2.73e-25,6;CL:0000805,2.73e-25,6;CL:0002425,2.73e-25,6;CL:0002436,2.73e-25,6;CL:0002427,2.73e-25,6;CL:0002428,2.73e-25,6;CL:0002429,2.73e-25,6;CL:0002433,2.73e-25,6;CL:0002431,2.73e-25,6;CL:0002432,2.73e-25,6;CL:0000738,5.96e-23,17;CL:0002087,5.96e-23,17;CL:0002031,3.50e-18,25;CL:0000988,8.33e-14,32;CL:0002032,8.33e-14,32;CL:0000037,8.33e-14,32;CL:0000837,8.33e-14,32;CL:0002320,4.83e-09,46;CL:0000134,4.83e-09,46;CL:0000219,1.98e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.87e-13,3;DOID:4045,3.87e-13,3;DOID:0050686,8.54e-07,6|ontology_enrichment_uberon=UBERON:0004177!2.94e-18!29;UBERON:0002370!1.00e-17!23;UBERON:0000974!1.00e-17!23;UBERON:0004807!1.00e-17!23;UBERON:0005058!1.00e-17!23;UBERON:0003351!1.00e-17!23;UBERON:0009113!1.00e-17!23;UBERON:0003295!1.00e-17!23;UBERON:0009722!1.00e-17!23;UBERON:0005562!1.00e-17!23;UBERON:0007690!1.00e-17!23;UBERON:0006562!8.81e-17!24;UBERON:0003408!8.81e-17!24;UBERON:0001557!8.81e-17!24;UBERON:0001042!8.81e-17!24;UBERON:0008814!8.81e-17!24;UBERON:0009145!8.81e-17!24;UBERON:0002193!1.18e-16!48;UBERON:0002390!1.54e-16!45;UBERON:0003061!1.54e-16!45;UBERON:0000072!2.23e-14!27;UBERON:0002405!3.78e-12!70;UBERON:0005057!3.52e-11!51;UBERON:0000063!5.08e-10!35;UBERON:0002384!8.71e-10!46;UBERON:0000065!6.37e-09!41;UBERON:0003081!9.43e-09!88;UBERON:0001004!1.34e-08!42;UBERON:0000490!9.59e-08!66;UBERON:0003929!3.83e-07!55;UBERON:0002368!7.06e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.55e-16,23;UBERON:0000974,3.55e-16,23;UBERON:0004807,3.55e-16,23;UBERON:0005058,3.55e-16,23;UBERON:0003351,3.55e-16,23;UBERON:0009113,3.55e-16,23;UBERON:0003295,3.55e-16,23;UBERON:0009722,3.55e-16,23;UBERON:0005562,3.55e-16,23;UBERON:0007690,3.55e-16,23;UBERON:0006562,1.95e-15,24;UBERON:0003408,1.95e-15,24;UBERON:0001557,1.95e-15,24;UBERON:0001042,1.95e-15,24;UBERON:0008814,1.95e-15,24;UBERON:0009145,1.95e-15,24;UBERON:0000072,1.51e-13,27;UBERON:0004177,1.67e-12,29;UBERON:0005057,1.67e-12,29;UBERON:0000077,4.36e-10,35;UBERON:0002193,4.62e-10,48;UBERON:0002405,4.62e-10,48;UBERON:0007811,9.20e-10,36;UBERON:0002390,4.39e-09,45;UBERON:0003061,4.39e-09,45;UBERON:0002384,4.83e-09,46;UBERON:0000065,2.23e-08,41;UBERON:0000490,2.95e-08,66;UBERON:0001004,3.86e-08,42;UBERON:0000153,6.49e-08,43|phase1_expression=0,0,0,0,0,0,0,5.29405626110463,24.7788150986933,26.2152269480633,10.6155140299813,7.25926646857561,3.25281386869291,3.4968160967599,0.333109761815663,0,0,0.315462165358238,0.274228867211478,1.27316895539409,0.0850432901510698,0.893618560807968,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,4.6880120671428,4.71171369576418,23.5292595212406,8.87959130445979,9.71020706062307,0,0,0,0,0,0,0,0,0,2.34895648480831,2.17608642603403,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.479260498023681,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.509935289981566,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0.39736270956253,0.360586348559907,0,1.11063094942962,0.609654453239999,1.10908803650525,0.974578807397524,1.92423683280659,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr9:44795268..44795283,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:44795268..44795283,- | |||
|id=chr9:44795268..44795283,- | |||
|ontology_enrichment_celltype=CL:0000838!2.45e-20!12;CL:0000084!8.77e-19!11;CL:0000827!8.77e-19!11;CL:0000542!1.66e-18!13;CL:0000051!1.66e-18!13;CL:0000791!4.38e-16!9;CL:0000789!4.38e-16!9;CL:0002420!4.38e-16!9;CL:0002419!4.38e-16!9;CL:0000790!4.38e-16!9;CL:0000988!8.38e-15!32;CL:0002032!8.38e-15!32;CL:0000037!8.38e-15!32;CL:0000566!8.38e-15!32;CL:0000837!8.38e-15!32;CL:0000624!1.33e-14!8;CL:0002031!1.64e-14!25;CL:0000738!2.39e-13!17;CL:0002087!2.39e-13!17;CL:0000893!1.77e-11!6;CL:0002489!1.77e-11!6;CL:0000898!1.77e-11!6;CL:0000809!1.77e-11!6;CL:0000810!1.77e-11!6;CL:0000895!1.77e-11!6;CL:0000808!1.77e-11!6;CL:0000894!1.77e-11!6;CL:0000806!1.77e-11!6;CL:0000807!1.77e-11!6;CL:0000805!1.77e-11!6;CL:0002425!1.77e-11!6;CL:0002436!1.77e-11!6;CL:0002427!1.77e-11!6;CL:0002428!1.77e-11!6;CL:0002429!1.77e-11!6;CL:0002433!1.77e-11!6;CL:0002431!1.77e-11!6;CL:0002432!1.77e-11!6;CL:0002320!8.71e-10!46;CL:0000134!8.71e-10!46;CL:0000219!2.19e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.28e-36,9;CL:0000789,2.28e-36,9;CL:0002420,2.28e-36,9;CL:0002419,2.28e-36,9;CL:0000790,2.28e-36,9;CL:0000838,3.74e-33,12;CL:0000624,8.52e-33,8;CL:0000542,1.74e-30,13;CL:0000051,1.74e-30,13;CL:0000084,1.58e-29,11;CL:0000827,1.58e-29,11;CL:0000893,2.73e-25,6;CL:0002489,2.73e-25,6;CL:0000898,2.73e-25,6;CL:0000809,2.73e-25,6;CL:0000810,2.73e-25,6;CL:0000895,2.73e-25,6;CL:0000808,2.73e-25,6;CL:0000894,2.73e-25,6;CL:0000806,2.73e-25,6;CL:0000807,2.73e-25,6;CL:0000805,2.73e-25,6;CL:0002425,2.73e-25,6;CL:0002436,2.73e-25,6;CL:0002427,2.73e-25,6;CL:0002428,2.73e-25,6;CL:0002429,2.73e-25,6;CL:0002433,2.73e-25,6;CL:0002431,2.73e-25,6;CL:0002432,2.73e-25,6;CL:0000738,5.96e-23,17;CL:0002087,5.96e-23,17;CL:0002031,3.50e-18,25;CL:0000988,8.33e-14,32;CL:0002032,8.33e-14,32;CL:0000037,8.33e-14,32;CL:0000837,8.33e-14,32;CL:0002320,4.83e-09,46;CL:0000134,4.83e-09,46;CL:0000219,1.98e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.87e-13,3;DOID:4045,3.87e-13,3;DOID:0050686,8.54e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.94e-18!29;UBERON:0002370!1.00e-17!23;UBERON:0000974!1.00e-17!23;UBERON:0004807!1.00e-17!23;UBERON:0005058!1.00e-17!23;UBERON:0003351!1.00e-17!23;UBERON:0009113!1.00e-17!23;UBERON:0003295!1.00e-17!23;UBERON:0009722!1.00e-17!23;UBERON:0005562!1.00e-17!23;UBERON:0007690!1.00e-17!23;UBERON:0006562!8.81e-17!24;UBERON:0003408!8.81e-17!24;UBERON:0001557!8.81e-17!24;UBERON:0001042!8.81e-17!24;UBERON:0008814!8.81e-17!24;UBERON:0009145!8.81e-17!24;UBERON:0002193!1.18e-16!48;UBERON:0002390!1.54e-16!45;UBERON:0003061!1.54e-16!45;UBERON:0000072!2.23e-14!27;UBERON:0002405!3.78e-12!70;UBERON:0005057!3.52e-11!51;UBERON:0000063!5.08e-10!35;UBERON:0002384!8.71e-10!46;UBERON:0000065!6.37e-09!41;UBERON:0003081!9.43e-09!88;UBERON:0001004!1.34e-08!42;UBERON:0000490!9.59e-08!66;UBERON:0003929!3.83e-07!55;UBERON:0002368!7.06e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.55e-16,23;UBERON:0000974,3.55e-16,23;UBERON:0004807,3.55e-16,23;UBERON:0005058,3.55e-16,23;UBERON:0003351,3.55e-16,23;UBERON:0009113,3.55e-16,23;UBERON:0003295,3.55e-16,23;UBERON:0009722,3.55e-16,23;UBERON:0005562,3.55e-16,23;UBERON:0007690,3.55e-16,23;UBERON:0006562,1.95e-15,24;UBERON:0003408,1.95e-15,24;UBERON:0001557,1.95e-15,24;UBERON:0001042,1.95e-15,24;UBERON:0008814,1.95e-15,24;UBERON:0009145,1.95e-15,24;UBERON:0000072,1.51e-13,27;UBERON:0004177,1.67e-12,29;UBERON:0005057,1.67e-12,29;UBERON:0000077,4.36e-10,35;UBERON:0002193,4.62e-10,48;UBERON:0002405,4.62e-10,48;UBERON:0007811,9.20e-10,36;UBERON:0002390,4.39e-09,45;UBERON:0003061,4.39e-09,45;UBERON:0002384,4.83e-09,46;UBERON:0000065,2.23e-08,41;UBERON:0000490,2.95e-08,66;UBERON:0001004,3.86e-08,42;UBERON:0000153,6.49e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,5.29405626110463,24.7788150986933,26.2152269480633,10.6155140299813,7.25926646857561,3.25281386869291,3.4968160967599,0.333109761815663,0,0,0.315462165358238,0.274228867211478,1.27316895539409,0.0850432901510698,0.893618560807968,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,4.6880120671428,4.71171369576418,23.5292595212406,8.87959130445979,9.71020706062307,0,0,0,0,0,0,0,0,0,2.34895648480831,2.17608642603403,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.479260498023681,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.509935289981566,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0.39736270956253,0.360586348559907,0,1.11063094942962,0.609654453239999,1.10908803650525,0.974578807397524,1.92423683280659,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:44795268..44795283,- | |||
}} |
Revision as of 17:58, 14 September 2013
Short description: | p@chr9:44795268..44795283, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44795268..44795283, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.55e-16 | 23 |
neck | 3.55e-16 | 23 |
respiratory system epithelium | 3.55e-16 | 23 |
hemolymphoid system gland | 3.55e-16 | 23 |
pharyngeal epithelium | 3.55e-16 | 23 |
thymic region | 3.55e-16 | 23 |
pharyngeal gland | 3.55e-16 | 23 |
entire pharyngeal arch endoderm | 3.55e-16 | 23 |
thymus primordium | 3.55e-16 | 23 |
early pharyngeal endoderm | 3.55e-16 | 23 |
pharynx | 1.95e-15 | 24 |
gland of gut | 1.95e-15 | 24 |
upper respiratory tract | 1.95e-15 | 24 |
chordate pharynx | 1.95e-15 | 24 |
pharyngeal arch system | 1.95e-15 | 24 |
pharyngeal region of foregut | 1.95e-15 | 24 |
segment of respiratory tract | 1.51e-13 | 27 |
hemopoietic organ | 1.67e-12 | 29 |
immune organ | 1.67e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 4.36e-10 | 35 |
hemolymphoid system | 4.62e-10 | 48 |
immune system | 4.62e-10 | 48 |
craniocervical region | 9.20e-10 | 36 |
hematopoietic system | 4.39e-09 | 45 |
blood island | 4.39e-09 | 45 |
connective tissue | 4.83e-09 | 46 |
respiratory tract | 2.23e-08 | 41 |
unilaminar epithelium | 2.95e-08 | 66 |
respiratory system | 3.86e-08 | 42 |
anterior region of body | 6.49e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.87e-13 | 3 |
muscle cancer | 3.87e-13 | 3 |
organ system cancer | 8.54e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.