FFCP PHASE1:Mm9::chrX:39502204..39502218,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:39502204..39502218,-|id=chrX:39502204..39502218,-|ontology_enrichment_celltype=CL:0000063!8.41e-08!66|ontology_enrichment_celltype_v019_2=CL:0002563,5.47e-23,9;CL:0002251,5.47e-23,9;CL:0000066,2.26e-17,25;CL:0000239,6.64e-16,6;CL:0000677,6.64e-16,6;CL:0000584,6.64e-16,6;CL:0000075,1.15e-13,7;CL:0002076,1.18e-13,15;CL:0000223,1.84e-13,20;CL:0002250,1.20e-08,3;CL:0000682,2.81e-08,3;CL:0000473,1.44e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.32e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.47e-23,9;UBERON:0004808,5.47e-23,9;UBERON:0001277,5.47e-23,9;UBERON:0000485,9.43e-19,11;UBERON:0001242,8.17e-16,13;UBERON:0001262,8.17e-16,13;UBERON:0004786,8.17e-16,13;UBERON:0000344,1.18e-13,15;UBERON:0004923,2.23e-08,24|phase1_expression=0,2.09385244583617,3.18499467572675,6.0492842261366,6.51164448930251,0.671517087647559,0.700837921786577,0.903863264091034,0.84473233291,0.468129052643987,0.513653904676515,0.239316476986009,0.342401459862411,1.39872643870396,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.340173160604279,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,1.72269589234506,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,0.61506478758457,0,2.88851619751275,0,2.24586291888606,0.418531630736908,1.5626706890476,0.523523743973798,0,2.04913645487534,0.971020706062307,0.251793635951155,0,0.183546752161682,0,0.65407546914134,0,0.388859798148567,0,0,0.838913030288682,0,1.68046899571232,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.210324961351382,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0,0,1.15945795480671,0,0,0.539703191637817,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0,0.187403449119458,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,0,0.660837565967596,0.793351699990633,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.740382983530803,0,0,0,0.449724224769707,0.202860121388503,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0,0.395287777946524,0.963963949265421,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0.238744688006273,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0.686334519619568,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0.537080087002444,0.596044064343795,0.120195449519969,0.443068581523732,0.302899349844443,0.304827226619999,0.302478555410522,0.38983152295901,0.384847366561318,0.584384510907845,0,0.221985953374065,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0,0,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.385813221962283,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0|short_description=p@chrX:39502204..39502218,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:39502204..39502218,- | |||
|id=chrX:39502204..39502218,- | |||
|ontology_enrichment_celltype=CL:0000063!8.41e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.47e-23,9;CL:0002251,5.47e-23,9;CL:0000066,2.26e-17,25;CL:0000239,6.64e-16,6;CL:0000677,6.64e-16,6;CL:0000584,6.64e-16,6;CL:0000075,1.15e-13,7;CL:0002076,1.18e-13,15;CL:0000223,1.84e-13,20;CL:0002250,1.20e-08,3;CL:0000682,2.81e-08,3;CL:0000473,1.44e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.32e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.47e-23,9;UBERON:0004808,5.47e-23,9;UBERON:0001277,5.47e-23,9;UBERON:0000485,9.43e-19,11;UBERON:0001242,8.17e-16,13;UBERON:0001262,8.17e-16,13;UBERON:0004786,8.17e-16,13;UBERON:0000344,1.18e-13,15;UBERON:0004923,2.23e-08,24 | |||
|phase1_expression=0,2.09385244583617,3.18499467572675,6.0492842261366,6.51164448930251,0.671517087647559,0.700837921786577,0.903863264091034,0.84473233291,0.468129052643987,0.513653904676515,0.239316476986009,0.342401459862411,1.39872643870396,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.340173160604279,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,1.72269589234506,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,0.61506478758457,0,2.88851619751275,0,2.24586291888606,0.418531630736908,1.5626706890476,0.523523743973798,0,2.04913645487534,0.971020706062307,0.251793635951155,0,0.183546752161682,0,0.65407546914134,0,0.388859798148567,0,0,0.838913030288682,0,1.68046899571232,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.210324961351382,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0,0,1.15945795480671,0,0,0.539703191637817,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0,0.187403449119458,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,0,0.660837565967596,0.793351699990633,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.740382983530803,0,0,0,0.449724224769707,0.202860121388503,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0,0.395287777946524,0.963963949265421,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0.238744688006273,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0.686334519619568,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0.537080087002444,0.596044064343795,0.120195449519969,0.443068581523732,0.302899349844443,0.304827226619999,0.302478555410522,0.38983152295901,0.384847366561318,0.584384510907845,0,0.221985953374065,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0,0,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.385813221962283,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chrX:39502204..39502218,- | |||
}} |
Revision as of 19:48, 14 September 2013
Short description: | p@chrX:39502204..39502218, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:39502204..39502218, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.47e-23 | 9 |
epithelial cell of alimentary canal | 5.47e-23 | 9 |
epithelial cell | 2.26e-17 | 25 |
brush border epithelial cell | 6.64e-16 | 6 |
gut absorptive cell | 6.64e-16 | 6 |
enterocyte | 6.64e-16 | 6 |
columnar/cuboidal epithelial cell | 1.15e-13 | 7 |
endo-epithelial cell | 1.18e-13 | 15 |
endodermal cell | 1.84e-13 | 20 |
intestinal crypt stem cell | 1.20e-08 | 3 |
M cell of gut | 2.81e-08 | 3 |
defensive cell | 1.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.47e-23 | 9 |
gastrointestinal system epithelium | 5.47e-23 | 9 |
intestinal epithelium | 5.47e-23 | 9 |
simple columnar epithelium | 9.43e-19 | 11 |
intestinal mucosa | 8.17e-16 | 13 |
wall of intestine | 8.17e-16 | 13 |
gastrointestinal system mucosa | 8.17e-16 | 13 |
mucosa | 1.18e-13 | 15 |
organ component layer | 2.23e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.