FFCP PHASE1:Hg19::chr1:22987498..22987528,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr1:22987498..22987528,- | |||
|id=chr1:22987498..22987528,- | |||
|ontology_enrichment_celltype=CL:0002619!1.05e-07!3;CL:0000235!3.13e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.83e-34;6!CL:0002619;3.32e-19;3!CL:0000840;1.16e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.06e-33,6;CL:0002619,3.33e-19,3;CL:0002194,9.31e-12,59;CL:0000576,9.31e-12,59;CL:0000040,9.31e-12,59;CL:0000559,9.31e-12,59;CL:0002009,2.65e-11,61;CL:0000839,2.77e-10,66;CL:0000557,4.24e-10,67;CL:0000840,1.18e-09,5;CL:0001029,1.18e-09,5;CL:0000766,3.01e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.66e-08;7!UBERON:0010227;3.50e-07;1!UBERON:0010115;3.50e-07;1!UBERON:0006222;6.87e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.38e-57!115;UBERON:0001049!2.22e-23!57;UBERON:0005068!2.22e-23!57;UBERON:0006241!2.22e-23!57;UBERON:0007135!2.22e-23!57;UBERON:0001017!2.59e-18!82;UBERON:0005743!2.92e-18!86;UBERON:0002616!1.04e-17!59;UBERON:0000955!2.60e-16!69;UBERON:0006238!2.60e-16!69;UBERON:0000073!1.33e-15!94;UBERON:0001016!1.33e-15!94;UBERON:0002780!2.98e-15!41;UBERON:0001890!2.98e-15!41;UBERON:0006240!2.98e-15!41;UBERON:0003075!7.37e-15!86;UBERON:0007284!7.37e-15!86;UBERON:0003080!9.37e-15!42;UBERON:0002346!8.51e-14!90;UBERON:0001893!9.59e-14!34;UBERON:0002020!1.09e-13!34;UBERON:0003528!1.09e-13!34;UBERON:0002791!1.14e-12!33;UBERON:0000062!5.79e-12!511;UBERON:0001869!2.47e-11!32;UBERON:0000153!2.55e-10!129;UBERON:0007811!2.55e-10!129;UBERON:0003076!2.64e-10!15;UBERON:0003057!2.64e-10!15;UBERON:0000200!2.72e-10!6;UBERON:0002308!1.73e-09!9;UBERON:0000125!1.73e-09!9;UBERON:0003056!1.86e-09!61;UBERON:0000467!2.32e-09!625;UBERON:0000480!2.63e-09!626;UBERON:0000468!2.69e-09!659;UBERON:0000033!5.27e-09!123;UBERON:0002619!1.89e-08!22;UBERON:0002298!2.96e-08!8;UBERON:0001950!8.15e-08!20;UBERON:0000922!1.02e-07!612;UBERON:0002050!1.48e-07!605;UBERON:0005423!1.48e-07!605;UBERON:0002420!2.54e-07!9;UBERON:0007245!2.54e-07!9;UBERON:0010009!2.54e-07!9;UBERON:0010011!2.54e-07!9;UBERON:0000454!2.54e-07!9;UBERON:0000956!3.58e-07!25;UBERON:0000203!3.58e-07!25;UBERON:0000923!3.96e-07!604;UBERON:0005291!3.96e-07!604;UBERON:0006598!3.96e-07!604;UBERON:0002532!3.96e-07!604;UBERON:0004121!8.24e-07!169;UBERON:0004733!9.48e-07!12;UBERON:0002028!9.48e-07!12;UBERON:0007277!9.48e-07!12;UBERON:0009663!9.60e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;2.93e-10;9!UBERON:0000125;2.93e-10;9!UBERON:0007245;2.93e-10;9!UBERON:0002308;2.93e-10;9!UBERON:0010009;2.93e-10;9!UBERON:0010011;2.93e-10;9!UBERON:0000454;2.93e-10;9!UBERON:0002106;1.10e-08;3!UBERON:0009663;7.24e-08;7!UBERON:0000029;2.23e-07;1!UBERON:0002171;2.23e-07;1!UBERON:0006518;2.23e-07;1!UBERON:0008949;2.23e-07;1!UBERON:0000101;2.23e-07;1!UBERON:0002167;2.23e-07;1!UBERON:0002038;2.75e-07;1!UBERON:0009661;2.75e-07;1!UBERON:0002950;2.75e-07;1!UBERON:0001891;2.75e-07;1!UBERON:0002363;3.50e-07;1!UBERON:0002079;3.50e-07;1!UBERON:0001301;6.87e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,6.24e-11,93;UBERON:0002420,3.27e-10,9;UBERON:0007245,3.27e-10,9;UBERON:0010009,3.27e-10,9;UBERON:0010011,3.27e-10,9;UBERON:0000454,3.27e-10,9;UBERON:0000125,3.98e-10,9;UBERON:0002308,3.98e-10,9;UBERON:0007023,1.98e-09,114;UBERON:0002193,5.29e-09,108;UBERON:0002106,7.78e-09,3;UBERON:0004854,7.78e-09,3;UBERON:0009034,7.78e-09,3;UBERON:0002095,7.78e-09,3;UBERON:0004782,7.78e-09,3;UBERON:0003281,7.78e-09,3;UBERON:0009664,7.78e-09,3;UBERON:0002296,7.78e-09,3;UBERON:0005602,7.78e-09,3;UBERON:0001179,7.78e-09,3;UBERON:0006293,7.78e-09,3;UBERON:0002390,9.38e-09,98;UBERON:0003061,9.38e-09,98;UBERON:0002371,1.20e-08,76;UBERON:0001474,7.39e-08,82;UBERON:0009663,8.07e-08,7;UBERON:0002171,1.98e-07,1;UBERON:0006518,1.98e-07,1;UBERON:0008949,1.98e-07,1;UBERON:0000101,1.98e-07,1;UBERON:0002167,1.98e-07,1;UBERON:0000029,2.52e-07,1;UBERON:0002038,2.84e-07,1;UBERON:0009661,2.84e-07,1;UBERON:0002950,2.84e-07,1;UBERON:0001891,2.84e-07,1;UBERON:0009616,2.84e-07,1;UBERON:0010286,2.84e-07,1;UBERON:0002363,3.60e-07,1;UBERON:0007645,3.60e-07,1;UBERON:0007647,3.60e-07,1;UBERON:0010115,3.60e-07,1;UBERON:0002079,3.82e-07,1;UBERON:0004765,5.73e-07,90;UBERON:0001301,8.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9308139814282,21.3769819572526,21.6363476812717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,4.54366351116557,4.52737316978095,5.45127638127347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,1.40402559083543,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,5.02257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0.23874448473769,0,0,0,1.40669416410513,0,0,0,1.59398390600856,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,1.4471572635049,0,0.221158519862449,0.886642856860642,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0.611030144933625,0,0,0,0.741412462787447,0.802577647298789,1.40558667435203,0,0,0,0,0,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0.90392296312213,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0,0,0,0.599037001496973,2.57535628881943,0,0.134366944973453,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0.2249738915515,0,0,0,0.236417121897595,0.157363764404994,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0.129282956361551,1.05786081394152,0,0,1.70859860108311,0.157204305099666,4.97086866416635,4.46549419630756,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,1.1267183763585,0,1.44207766997908,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.271878931907327,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.771741581079447,0.655678681511872,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0.4226557275834,0,4.88716373495239,1.80482086326016,0,0,0,0,0,0,3.01013124618048,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.827463966895162,0.852935927603924,0,0.0645889098360061,0.434523000071005,0,0.190941474834495,0.404234377916439,0.217716747896961,0.684466602170562,0.0673520530145875,0.286888821570705,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.603821380773079,0 | |||
|short_description=p@chr1:22987498..22987528,- | |||
}} |
Revision as of 16:58, 10 January 2014
Short description: | p@chr1:22987498..22987528, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:22987498..22987528, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.06e-33 | 6 |
adult endothelial progenitor cell | 3.33e-19 | 3 |
monopoietic cell | 9.31e-12 | 59 |
monocyte | 9.31e-12 | 59 |
monoblast | 9.31e-12 | 59 |
promonocyte | 9.31e-12 | 59 |
macrophage dendritic cell progenitor | 2.65e-11 | 61 |
myeloid lineage restricted progenitor cell | 2.77e-10 | 66 |
granulocyte monocyte progenitor cell | 4.24e-10 | 67 |
immature conventional dendritic cell | 1.18e-09 | 5 |
common dendritic progenitor | 1.18e-09 | 5 |
myeloid leukocyte | 3.01e-09 | 72 |