FFCP PHASE1:Hg19::chr1:26503974..26504025,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19700 | |||
|TSSclassifier=weak | |||
|UniProt=Q969H4,E7ESN3,E9PIE0,E9PS82,B4DXN4,Q53GM7 | |||
|association_with_transcript=0bp_to_ENST00000374253,ENST00000422547,ENST00000465415,ENST00000480348,ENST00000481077,ENST00000482227,ENST00000525687,NM_006314,NR_023345,uc001blm.3,uc001bln.3,uc009vsd.2,uc009vse.2,uc010oex.1_5end | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_CNKSR1_5end | |||
|id=chr1:26503974..26504025,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.55e-33!254;CL:0002076!7.22e-19!43;CL:0000223!5.01e-18!59;CL:0002368!2.37e-09!13;CL:0002251!3.71e-09!21;CL:0002159!8.54e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.02e-17;42!CL:0002251;1.07e-11;20!CL:0002368;5.67e-11;13!CL:0002159;3.42e-08;14!CL:0002202;1.81e-07;9!CL:0002632;1.81e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.39e-39,253;CL:0002076,1.40e-22,42;CL:0000223,4.22e-22,58;CL:0002251,1.05e-11,20;CL:0002368,6.50e-11,13;CL:0002159,3.48e-08,14;CL:0002202,1.95e-07,9;CL:0002632,1.95e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.24e-12;58!UBERON:0006595;5.14e-10;86!UBERON:0008947;1.70e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.32e-24!106;DOID:0050687!1.06e-14!143;DOID:299!4.25e-09!25;DOID:1749!2.24e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.09e-09;14!DOID:299;3.12e-09;25!DOID:305;8.94e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.39e-27,106;DOID:0050687,1.25e-17,143;DOID:1749,9.51e-10,14;DOID:299,2.90e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.74e-31!169;UBERON:0000925!3.74e-31!169;UBERON:0006595!3.74e-31!169;UBERON:0001007!5.02e-24!155;UBERON:0001555!5.02e-24!155;UBERON:0007026!5.02e-24!155;UBERON:0004921!1.58e-21!129;UBERON:0004185!1.58e-21!129;UBERON:0000077!2.40e-21!130;UBERON:0001004!4.98e-18!72;UBERON:0001041!8.53e-16!98;UBERON:0000065!4.49e-14!53;UBERON:0000466!7.00e-14!126;UBERON:0000464!1.77e-13!104;UBERON:0005911!1.12e-12!82;UBERON:0008947!1.13e-10!38;UBERON:0003258!1.13e-10!38;UBERON:0000072!2.29e-10!46;UBERON:0005631!2.37e-09!14;UBERON:0000158!2.37e-09!14;UBERON:0000161!5.75e-09!35;UBERON:0005153!1.41e-08!37;UBERON:0005177!5.03e-08!107;UBERON:0001008!5.13e-08!45;UBERON:0002553!5.96e-08!70;UBERON:0006554!9.75e-08!44;UBERON:0002530!1.22e-07!59;UBERON:0003124!3.10e-07!7;UBERON:0001048!5.16e-07!168;UBERON:0003104!5.64e-07!238;UBERON:0009142!5.64e-07!238;UBERON:0000166!6.28e-07!21;UBERON:0000058!8.93e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;6.22e-11;44!UBERON:0004921;1.24e-10;33!UBERON:0001004;6.76e-10;65!UBERON:0000072;1.29e-08;37!UBERON:0001041;1.35e-07;14!UBERON:0000161;2.32e-07;19!UBERON:0000166;2.32e-07;19!UBERON:0005178;3.50e-07;34!UBERON:0002224;3.50e-07;34!UBERON:0001555;3.53e-07;54!UBERON:0002365;4.96e-07;31!UBERON:0002330;4.96e-07;31!UBERON:0005631;5.66e-07;10!UBERON:0000158;5.66e-07;10!UBERON:0005911;7.60e-07;36!UBERON:0005409;9.77e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.67e-35,160;UBERON:0000925,3.67e-35,160;UBERON:0006595,3.67e-35,160;UBERON:0001007,5.02e-27,145;UBERON:0001555,5.02e-27,145;UBERON:0007026,5.02e-27,145;UBERON:0004921,1.02e-23,118;UBERON:0001004,1.04e-18,74;UBERON:0001041,6.37e-17,87;UBERON:0000065,4.89e-14,54;UBERON:0005911,8.31e-14,82;UBERON:0008947,1.94e-12,38;UBERON:0003258,1.94e-12,38;UBERON:0001008,9.79e-12,48;UBERON:0006554,2.18e-11,47;UBERON:0005631,4.84e-11,14;UBERON:0000158,4.84e-11,14;UBERON:0005177,2.02e-10,101;UBERON:0000072,6.27e-10,47;UBERON:0000161,6.62e-10,36;UBERON:0005153,1.71e-09,37;UBERON:0002530,1.61e-08,59;UBERON:0003124,2.81e-08,7;UBERON:0005178,5.81e-08,34;UBERON:0002224,5.81e-08,34;UBERON:0005157,8.94e-08,47;UBERON:0000166,8.99e-08,22;UBERON:0005181,1.49e-07,35;UBERON:0009569,1.91e-07,112;UBERON:0002365,4.00e-07,31;UBERON:0002330,4.00e-07,31;UBERON:0001048,9.32e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,17.2013755551056,29.307649054842,26.649847399881,21.3651252365047,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.328402357799783,0.314843125254717,0,0,0.154816123316076,14.7107395916628,17.7711492079168,15.5296684270051,0,0,2.34880351467878,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,2.10707267820062,1.57367816091066,1.17903228824749,0.411202997999018,3.17654341242288,0.651844533267181,0,0,2.78526142212934,0.883817722424512,0.221533894583621,1.08321545506006,1.15282187753108,1.04047478047903,0.164437904603676,1.10540007114339,1.73881851441031,1.18629250529648,1.07016331235885,0,1.58633079776593,0.383220493601921,0,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,33.5151665229139,22.9886354526346,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,22.2407966592693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9395636100031,23.7289124914026,19.7895170818413,5.2448693635726,5.03613119621644,4.29917588617218,4.5610864206763,4.28945446488568,1.09493207722749,0,0.643240938192885,0,0,0,5.91534000199219,7.92348043367078,6.50729780685401,7.38969617307039,5.22910665821775,4.98268300133303,8.08987848960986,10.203516186518,8.46443745282059,0,0,0,0,3.80265104465493,2.94848165003288,0,0,6.14942192715568,0,23.9255622190804,20.2323155863715,11.2592449101027,12.7772054318771,0,0,0,0,0,0.144366447761074,0,0,9.4824527755113,9.4433477830436,0,0,0,13.1227367581488,6.55130299975552,11.9091081683605,19.0759653357067,18.8912060034075,19.5525166374258,0,0.088048434013226,0,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.213455115606889,30.9190122875185,38.2801510874143,32.6581516796055,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,16.8425435054759,10.2209897718845,0,0,0.131124414959424,7.670393419426,4.85196623757813,12.5495963068297,7.30696123266303,3.0609972378934,0,0,0.431831832204279,1.54227252690289,0.270946437543853,1.50506932156456,6.37190682612596,9.97291210714469,3.35812132083267,0.219259876645935,0,0,0,0,8.65544497840867,0,0,48.2383051916785,30.5528315637165,0,0,0,0,0,0,0.145016693914229,0,0,16.5284915360978,16.1439656586689,38.7942645983536,9.50883140042169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,15.0106495851799,16.0872546128589,16.3336477291984,9.22609247612436,26.260827732945,21.9012918367913,24.3886584445172,15.1617444136593,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0,0,13.2321716629757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91844864163565,0,0,0,0,43.4514962222596,24.0541391474437,36.5521235498086,0,0,0,0,0,2.19172787076177,1.93398740871803,0,0,0,0,11.9524907025945,6.98182581234876,0,3.94573622547734,0,0,0,0,0,12.5005325320912,13.0315399994332,1.44999915086959,8.19312827655598,14.2382044163949,7.32801813480603,0,0,0,0,0,0,0,0,0,10.0223386437471,8.92311963383061,2.77020930613669,0,23.2869543431941,8.88600679656744,18.2527584828974,19.778071903379,8.5185761863732,13.3258694004659,0,0,0,0,0,0,0,0,0.210998064528027,7.34547636716165,4.80600442875399,0,7.96209544862804,12.8263468529842,9.77648231893801,0,0,0,0.067401132980677,0,0,0,9.19623708980822,0,8.68085686268659,6.04953580243319,0,0.063186579628488,0,0,0.664653872707185,0,0,0,7.6844577428044,0,14.2318985434807,18.3245783164886,8.35768383171865,8.38688007561745,0.171986032471617,3.67674058898524,5.33552014729155,3.61308011034121,10.0868577147956,0,2.25980740780532,0,0,0,13.4930454087014,11.863505397227,8.96502577905281,3.79638258206047,7.63679210916762,0,0,1.29649318189335,4.47309128035557,16.9699704924093,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,10.5829870264465,0,0,0.806201669840715,0,17.4743924291181,4.3330750268973,4.53287221096415,4.24642326281365,0,0,0,0,6.26937279013575,5.77665633708382,4.15440338029185,0.899895566206002,10.8332273638113,0,16.7717343799633,6.30445658393585,9.54673504056965,0,0,7.48469269545837,0,0,0,0,0,0,0,0,0,0,1.31897010310274,1.32506888912221,0,0,0,16.9155605356001,8.54299300541557,9.74666691617929,4.14239055347196,0,0,0,37.0237929506705,0,0,0,0,9.73735396751453,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0.468334905806882,10.1444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34210113519403,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.32864840313363,1.79921933681429,0,0,9.93166979785547,0,0,0,0,0,9.51180652492222,12.4415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p1@CNKSR1 | |||
}} |
Revision as of 17:12, 10 January 2014
Short description: | p1@CNKSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNKSR1_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000374253, ENST00000422547, ENST00000465415, ENST00000480348, ENST00000481077, ENST00000482227, ENST00000525687, NM_006314, NR_023345, uc001blm.3, uc001bln.3, uc009vsd.2, uc009vse.2, uc010oex.1_5end |
EntrezGene: | CNKSR1 |
HGNC: | 19700 |
UniProt: | Q969H4E7ESN3E9PIE0E9PS82B4DXN4Q53GM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.39e-39 | 253 |
endo-epithelial cell | 1.40e-22 | 42 |
endodermal cell | 4.22e-22 | 58 |
epithelial cell of alimentary canal | 1.05e-11 | 20 |
respiratory epithelial cell | 6.50e-11 | 13 |
general ecto-epithelial cell | 3.48e-08 | 14 |
epithelial cell of tracheobronchial tree | 1.95e-07 | 9 |
epithelial cell of lower respiratory tract | 1.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.67e-35 | 160 |
endoderm | 3.67e-35 | 160 |
presumptive endoderm | 3.67e-35 | 160 |
digestive system | 5.02e-27 | 145 |
digestive tract | 5.02e-27 | 145 |
primitive gut | 5.02e-27 | 145 |
subdivision of digestive tract | 1.02e-23 | 118 |
respiratory system | 1.04e-18 | 74 |
foregut | 6.37e-17 | 87 |
respiratory tract | 4.89e-14 | 54 |
endo-epithelium | 8.31e-14 | 82 |
respiratory primordium | 1.94e-12 | 38 |
endoderm of foregut | 1.94e-12 | 38 |
renal system | 9.79e-12 | 48 |
urinary system structure | 2.18e-11 | 47 |
extraembryonic membrane | 4.84e-11 | 14 |
membranous layer | 4.84e-11 | 14 |
trunk region element | 2.02e-10 | 101 |
segment of respiratory tract | 6.27e-10 | 47 |
orifice | 6.62e-10 | 36 |
epithelial bud | 1.71e-09 | 37 |
gland | 1.61e-08 | 59 |
chorion | 2.81e-08 | 7 |
thoracic cavity element | 5.81e-08 | 34 |
thoracic cavity | 5.81e-08 | 34 |
epithelial fold | 8.94e-08 | 47 |
oral opening | 8.99e-08 | 22 |
thoracic segment organ | 1.49e-07 | 35 |
subdivision of trunk | 1.91e-07 | 112 |
exocrine gland | 4.00e-07 | 31 |
exocrine system | 4.00e-07 | 31 |
primordium | 9.32e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.39e-27 | 106 |
cell type cancer | 1.25e-17 | 143 |
squamous cell carcinoma | 9.51e-10 | 14 |
adenocarcinoma | 2.90e-09 | 25 |