FFCP PHASE1:Hg19::chr1:28995258..28995322,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4370 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y692 | |||
|association_with_transcript=0bp_to_ENST00000294409,ENST00000361872_5end | |||
|description=CAGE_peak_1_at_GMEB1_5end | |||
|id=chr1:28995258..28995322,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.52e-29!172;CL:0000566!3.52e-29!172;CL:0000988!1.41e-28!182;CL:0002032!1.76e-27!165;CL:0000837!1.76e-27!165;CL:0000738!8.87e-24!140;CL:0000763!3.04e-22!112;CL:0000049!3.04e-22!112;CL:0002057!1.62e-21!42;CL:0000860!1.25e-19!45;CL:0002031!4.01e-19!124;CL:0000766!3.91e-16!76;CL:0002087!7.26e-16!119;CL:0000557!8.20e-14!71;CL:0000839!1.87e-13!70;CL:0002009!6.21e-12!65;CL:0002194!4.36e-11!63;CL:0000576!4.36e-11!63;CL:0000040!4.36e-11!63;CL:0000559!4.36e-11!63;CL:0000134!9.30e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-18;33!CL:0002057;4.56e-18;33!CL:0000576;3.59e-12;48!CL:0000473;9.65e-11;39!CL:0000234;9.65e-11;39!CL:0000766;4.18e-09;69!CL:0002087;2.11e-07;104!CL:0000763;2.42e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.00e-30,168;CL:0000988,4.72e-29,177;CL:0002032,2.54e-28,161;CL:0000837,2.54e-28,161;CL:0000738,1.20e-24,136;CL:0000763,2.95e-23,108;CL:0000049,2.95e-23,108;CL:0000860,1.62e-21,42;CL:0002057,1.62e-21,42;CL:0002031,6.26e-20,120;CL:0000766,3.18e-17,72;CL:0002087,1.41e-16,115;CL:0000473,3.78e-16,48;CL:0000234,3.78e-16,48;CL:0000557,8.10e-15,67;CL:0000839,1.89e-14,66;CL:0002009,6.94e-13,61;CL:0002194,5.32e-12,59;CL:0000576,5.32e-12,59;CL:0000040,5.32e-12,59;CL:0000559,5.32e-12,59;CL:0000134,8.87e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-16;42!CL:0000049;4.48e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.35e-16!102;UBERON:0003061!3.35e-16!102;UBERON:0002193!6.41e-14!112;UBERON:0002371!4.07e-12!80;UBERON:0001474!1.06e-11!86;UBERON:0004765!5.49e-08!101;UBERON:0001434!5.49e-08!101;UBERON:0002405!6.61e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.91e-17,98;UBERON:0003061,4.91e-17,98;UBERON:0002193,1.37e-14,108;UBERON:0002371,6.46e-13,76;UBERON:0001474,2.00e-12,82;UBERON:0002405,2.34e-11,93;UBERON:0004765,2.92e-09,90;UBERON:0001434,2.82e-07,100 | |||
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| |||
|short_description=p1@GMEB1 | |||
}} |
Revision as of 17:27, 10 January 2014
Short description: | p1@GMEB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GMEB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000294409, ENST00000361872_5end |
EntrezGene: | GMEB1 |
HGNC: | 4370 |
UniProt: | Q9Y692 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.00e-30 | 168 |
hematopoietic cell | 4.72e-29 | 177 |
hematopoietic oligopotent progenitor cell | 2.54e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-28 | 161 |
leukocyte | 1.20e-24 | 136 |
myeloid cell | 2.95e-23 | 108 |
common myeloid progenitor | 2.95e-23 | 108 |
classical monocyte | 1.62e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-21 | 42 |
hematopoietic lineage restricted progenitor cell | 6.26e-20 | 120 |
myeloid leukocyte | 3.18e-17 | 72 |
nongranular leukocyte | 1.41e-16 | 115 |
defensive cell | 3.78e-16 | 48 |
phagocyte | 3.78e-16 | 48 |
granulocyte monocyte progenitor cell | 8.10e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.89e-14 | 66 |
macrophage dendritic cell progenitor | 6.94e-13 | 61 |
monopoietic cell | 5.32e-12 | 59 |
monocyte | 5.32e-12 | 59 |
monoblast | 5.32e-12 | 59 |
promonocyte | 5.32e-12 | 59 |
mesenchymal cell | 8.87e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.91e-17 | 98 |
blood island | 4.91e-17 | 98 |
hemolymphoid system | 1.37e-14 | 108 |
bone marrow | 6.46e-13 | 76 |
bone element | 2.00e-12 | 82 |
immune system | 2.34e-11 | 93 |
skeletal element | 2.92e-09 | 90 |
skeletal system | 2.82e-07 | 100 |