FFCP PHASE1:Hg19::chr1:31230911..31230925,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29612 | |||
|TSSclassifier=strong | |||
|UniProt=Q13571,Q5TBB8 | |||
|association_with_transcript=-228bp_to_NM_006762,uc001bsc.2_5end | |||
|description=CAGE_peak_7_at_LAPTM5_5end | |||
|id=chr1:31230911..31230925,- | |||
|ontology_enrichment_celltype=CL:0000738!4.02e-50!140;CL:0000037!4.48e-46!172;CL:0000566!4.48e-46!172;CL:0000988!1.64e-43!182;CL:0002031!9.88e-42!124;CL:0002087!1.02e-41!119;CL:0002032!1.07e-41!165;CL:0000837!1.07e-41!165;CL:0000766!1.34e-35!76;CL:0002057!4.29e-32!42;CL:0000839!7.87e-32!70;CL:0000557!3.42e-31!71;CL:0000860!3.02e-29!45;CL:0000763!5.45e-28!112;CL:0000049!5.45e-28!112;CL:0002194!9.61e-27!63;CL:0000576!9.61e-27!63;CL:0000040!9.61e-27!63;CL:0000559!9.61e-27!63;CL:0002009!1.45e-25!65;CL:0000945!8.31e-17!24;CL:0000826!8.31e-17!24;CL:0000134!5.15e-13!358;CL:0002320!2.48e-12!365;CL:0000542!3.98e-12!53;CL:0000051!3.98e-12!53;CL:0000838!2.12e-11!52;CL:0000048!1.96e-10!430;CL:0002393!2.12e-10!9;CL:0002397!2.12e-10!9;CL:0000723!5.71e-10!436;CL:0000219!5.77e-10!390;CL:0000034!6.90e-10!444;CL:0002274!1.43e-09!5;CL:0000457!1.43e-09!5;CL:0002191!1.43e-09!5;CL:0000097!1.43e-09!5;CL:0000831!1.43e-09!5;CL:0002028!1.43e-09!5;CL:0000236!6.06e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.16e-16;24!CL:0000097;3.67e-12;5!CL:0002144;3.58e-10;3!CL:0000767;1.56e-09;3!CL:0000860;5.53e-08;33!CL:0002057;5.53e-08;33!CL:0000766;5.86e-08;69!CL:0000094;8.80e-08;8!CL:0000946;9.07e-08;1!CL:0000786;9.07e-08;1!CL:0000473;1.05e-07;39!CL:0000234;1.05e-07;39!CL:0000738;4.66e-07;136!CL:0000576;5.26e-07;48!CL:0000163;5.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-22,136;CL:0002032,3.38e-20,161;CL:0000837,3.38e-20,161;CL:0002031,2.23e-19,120;CL:0000766,3.00e-19,72;CL:0000037,3.66e-19,168;CL:0000988,5.95e-18,177;CL:0000945,2.37e-16,24;CL:0000826,2.37e-16,24;CL:0002087,2.47e-14,115;CL:0000839,1.13e-13,66;CL:0000763,1.46e-13,108;CL:0000049,1.46e-13,108;CL:0000557,1.96e-13,67;CL:0000097,1.40e-12,5;CL:0002028,1.40e-12,5;CL:0000473,1.51e-11,48;CL:0000234,1.51e-11,48;CL:0000860,8.92e-11,42;CL:0002057,8.92e-11,42;CL:0002144,3.68e-10,3;CL:0000767,1.50e-09,3;CL:0002194,6.65e-09,59;CL:0000576,6.65e-09,59;CL:0000040,6.65e-09,59;CL:0000559,6.65e-09,59;CL:0002009,1.46e-08,61;CL:0000946,6.97e-08,1;CL:0000786,6.97e-08,1;CL:0000980,6.97e-08,1;CL:0000094,9.04e-08,8;CL:0000236,9.57e-08,14;CL:0000134,2.11e-07,354;CL:0000163,3.43e-07,9;CL:0002320,3.66e-07,361;CL:0000838,6.28e-07,52;CL:0000542,8.91e-07,53;CL:0000051,8.91e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.53e-08;42 | |||
|ontology_enrichment_disease=DOID:0060058!3.09e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:630;3.19e-08;1!DOID:0050177;3.19e-08;1!DOID:0050427;3.19e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.10e-08,1;DOID:0050177,3.10e-08,1;DOID:0050427,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.16e-32!112;UBERON:0002390!1.44e-27!102;UBERON:0003061!1.44e-27!102;UBERON:0002371!3.48e-26!80;UBERON:0002405!3.49e-24!115;UBERON:0001474!1.93e-23!86;UBERON:0004765!4.71e-18!101;UBERON:0001434!4.71e-18!101;UBERON:0002384!2.08e-11!375;UBERON:0003081!3.27e-11!216;UBERON:0002204!5.78e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.58e-10;3!UBERON:0001915;3.58e-10;3!UBERON:0001982;3.58e-10;3!UBERON:0000029;9.07e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.86e-14,93;UBERON:0002193,7.20e-12,108;UBERON:0002371,1.42e-11,76;UBERON:0001474,1.47e-10,82;UBERON:0010523,3.68e-10,3;UBERON:0001915,3.68e-10,3;UBERON:0001982,3.68e-10,3;UBERON:0002390,5.72e-10,98;UBERON:0003061,5.72e-10,98;UBERON:0004765,2.04e-09,90;UBERON:0001434,3.04e-08,100;UBERON:0000029,7.45e-08,1;UBERON:0002384,7.80e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.31360943119913,1.10195093839151,1.96682138424452,0.383829398097213,1.08371286321253,0,0,0,0.0774672005803016,0.142169232487422,0,1.66198622559563,1.20326668482085,0.434021741431704,0,0,0,0.726991193897824,0,0,1.16214518452842,0.822335776043652,0.309706370895104,1.1507695692886,0.512321413058201,0.47296445977717,0,0.645484683583826,0,0.564727018627814,1.36453075028923,0,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,1.27867425159808,1.7412554317715,1.13477044938228,0,1.00499466102697,0,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0.850417199860174,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,2.27685187643779,1.17447437874188,4.58727873750275,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,1.33888245105868,3.22263453687318,0.760272105718513,7.07779966889692,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.985326475791887,1.93706554829097,1.65862492432618,1.72943944100354,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,1.37402137902306,0,0.223676107892416,0,0,0.835218521685727,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,1.84627208191604,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0.395223263795889,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,1.49804183822513,0,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.281951753939561,0.0644578879735772,1.49911733887393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,3.52625341533556 | |||
|short_description=p7@LAPTM5 | |||
}} |
Revision as of 17:31, 10 January 2014
Short description: | p7@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LAPTM5_5end |
Coexpression cluster: | NA |
Association with transcript: | -228bp_to_NM_006762, uc001bsc.2_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | Q13571Q5TBB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 2.86e-14 | 93 |
hemolymphoid system | 7.20e-12 | 108 |
bone marrow | 1.42e-11 | 76 |
bone element | 1.47e-10 | 82 |
microcirculatory vessel | 3.68e-10 | 3 |
endothelium of capillary | 3.68e-10 | 3 |
capillary | 3.68e-10 | 3 |
hematopoietic system | 5.72e-10 | 98 |
blood island | 5.72e-10 | 98 |
skeletal element | 2.04e-09 | 90 |
skeletal system | 3.04e-08 | 100 |
lymph node | 7.45e-08 | 1 |
connective tissue | 7.80e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.10e-08 | 1 |
monogenic disease | 3.10e-08 | 1 |
xeroderma pigmentosum | 3.10e-08 | 1 |