FFCP PHASE1:Hg19::chr1:40810464..40810514,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25082 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000435168_5end | |||
|coexpression_cluster_id=C2301 | |||
|description=CAGE_peak_2_at_SMAP2_5end | |||
|id=chr1:40810464..40810514,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.59e-43!140;CL:0002087!4.56e-39!119;CL:0002031!7.47e-34!124;CL:0000766!1.12e-33!76;CL:0002194!3.35e-33!63;CL:0000576!3.35e-33!63;CL:0000040!3.35e-33!63;CL:0000559!3.35e-33!63;CL:0002057!5.96e-33!42;CL:0002009!8.38e-33!65;CL:0000860!2.62e-29!45;CL:0000557!1.03e-28!71;CL:0000839!3.44e-28!70;CL:0000037!4.38e-28!172;CL:0000566!4.38e-28!172;CL:0002032!1.36e-26!165;CL:0000837!1.36e-26!165;CL:0000988!1.84e-26!182;CL:0000763!3.69e-19!112;CL:0000049!3.69e-19!112;CL:0002393!4.82e-09!9;CL:0002397!4.82e-09!9;CL:0000838!1.42e-07!52;CL:0000542!3.13e-07!53;CL:0000051!3.13e-07!53;CL:0000236!5.90e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.04e-33;39!CL:0000234;3.04e-33;39!CL:0000860;9.71e-33;33!CL:0002057;9.71e-33;33!CL:0000576;3.23e-30;48!CL:0000766;3.46e-23;69!CL:0002087;1.08e-13;104!CL:0000738;6.90e-13;136!CL:0000763;9.05e-10;100!CL:0000236;1.38e-08;13!CL:0002393;1.64e-08;6!CL:0002397;1.64e-08;6!CL:0000235;2.24e-08;6!CL:0000988;1.19e-07;177!CL:0000990;4.76e-07;8!CL:0000094;7.09e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.01e-54,136;CL:0000473,1.96e-54,48;CL:0000234,1.96e-54,48;CL:0000766,4.68e-54,72;CL:0002194,7.34e-54,59;CL:0000576,7.34e-54,59;CL:0000040,7.34e-54,59;CL:0000559,7.34e-54,59;CL:0002009,2.11e-53,61;CL:0002087,2.61e-50,115;CL:0000860,2.90e-47,42;CL:0002057,2.90e-47,42;CL:0000557,9.45e-47,67;CL:0000839,5.72e-46,66;CL:0002031,1.57e-43,120;CL:0000037,2.20e-39,168;CL:0002032,2.18e-38,161;CL:0000837,2.18e-38,161;CL:0000988,8.99e-38,177;CL:0000763,1.89e-35,108;CL:0000049,1.89e-35,108;CL:0002393,1.98e-12,9;CL:0002397,1.98e-12,9;CL:0000235,2.27e-08,6;CL:0000236,6.91e-08,14;CL:0000134,1.62e-07,354;CL:0000990,4.37e-07,8;CL:0000094,5.91e-07,8;CL:0002320,6.27e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-33;42!CL:0000049;2.28e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-36!102;UBERON:0003061!1.49e-36!102;UBERON:0002193!1.31e-32!112;UBERON:0007023!1.50e-32!115;UBERON:0002371!1.26e-26!80;UBERON:0001474!6.76e-23!86;UBERON:0002405!5.09e-19!115;UBERON:0004765!1.40e-17!101;UBERON:0001434!1.40e-17!101;UBERON:0003081!9.98e-15!216;UBERON:0002204!1.81e-12!167;UBERON:0000178!2.33e-11!15;UBERON:0000179!2.33e-11!15;UBERON:0000463!2.33e-11!15;UBERON:0001049!3.11e-07!57;UBERON:0005068!3.11e-07!57;UBERON:0006241!3.11e-07!57;UBERON:0007135!3.11e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.50e-14;15!UBERON:0000179;3.50e-14;15!UBERON:0000463;3.50e-14;15!UBERON:0002390;7.87e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.21e-55,98;UBERON:0003061,4.21e-55,98;UBERON:0002193,6.77e-51,108;UBERON:0002371,3.67e-42,76;UBERON:0002405,6.31e-38,93;UBERON:0001474,1.57e-37,82;UBERON:0004765,2.43e-32,90;UBERON:0001434,4.97e-28,100;UBERON:0003081,5.17e-20,203;UBERON:0007023,3.29e-19,114;UBERON:0000178,3.55e-14,15;UBERON:0000179,3.55e-14,15;UBERON:0000463,3.55e-14,15;UBERON:0002204,6.80e-11,167;UBERON:0000926,1.50e-07,315;UBERON:0004120,1.50e-07,315;UBERON:0006603,1.50e-07,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,48.3838060524152,12.2825407391108,17.3394058114005,0,0,0,2.71135202031056,0,0,21.0518255242113,13.0353890855592,7.37836960433896,62.6963327871788,55.7097105552645,74.4393390462799,10.03247847579,7.55751887377619,9.46077838632483,9.52959051313307,5.75635043230556,7.74265927237759,54.6615545412086,45.0842843491217,71.6541156562413,11.721353145045,10.3277549373412,14.8969135253776,9.41211697713024,7.36846605156184,10.1125568000288,17.4467818651414,12.1953030288916,10.8687311385837,70.918029540144,61.235342889841,75.4417808442869,10.1573233520004,6.24123747160254,4.9825779919646,29.6473425002957,40.6756676367757,45.6096573880745,7.26479403160043,10.6800514436394,14.5572698222807,93.5860918361902,116.719760680809,99.1685393254618,13.4794357375794,39.3463459244747,51.9143645031569,123.695530783702,153.762591474897,168.964342232286,1.75996244461323,10.3766336139805,9.7846017924991,9.81479511902967,8.80871171479227,10.9202963591352,10.5767179645578,1.90810750907073,4.55370375287559,8.22132065119314,3.05818582500183,0,1.68152568894461,0,0.786839080455332,0.393010762749165,0.205601498999509,0.501559486172034,0.32592226663359,0.473447805734733,0,7.01885878376594,1.17842362989935,1.77227115666897,3.5204502289452,8.32593578216889,9.36427302431123,0,0,0,0.889719378972363,1.60524496853828,0,0.679856056185397,0,0,0,1.91139248594458,1.30216690771284,0,4.06552821509986,2.68771883424279,4.99722906209383,3.31488152861624,0,0.403213486449465,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0.665188192387692,0,2.29213382120997,0,0,36.9984028766339,50.6717535540868,37.0952709847634,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91413608338813,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,43.0879760652945,16.8483070900251,16.0521655271827,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0.099972991182057,18.2435670961786,23.6060832973099,18.9750545534728,0,0,0,0.289562613335158,0,0,0,0.788123040807709,0.215627574859517,0.513372145118994,0,0,0,0,0,2.99602809578873,0,12.018049889645,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,23.9850910302549,15.747136659759,14.1947651878581,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.355123450626254,0.739144404124282,0,0.464841513839837,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,3.09123034943167,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0,0.340906509664404,0.0890320356467374,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0.608731130888112,0.92947049429925,0.563391205064483,0,0.0982490410131212,2.1400263088875,0.354761064070598,1.05553817648832,0,0,0.349934720244983,0,0,0,3.48332062874083,0,0,0,0,17.2532187138938,16.8220185571323,13.1018853050057,16.1997607311297,17.6885777427064,14.2664128462398,14.040817368191,14.2762531732969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,3.56618829687931,0,0,0,0,0.994147647766298,2.67271891179974,0,0,0,1.9924798825107,3.59169090190492,0,0,0.369254416383208,0.622079175323615,0,0,0,3.45251919729268,16.7638164642858,0,0,1.02044907978036,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,0,0,0.885741385813839,1.20596438625408,0,1.3269511191747,0,0.87754158861589,0,0,0.615602068030377,0,0,0,0,0.638002319463839,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,1.83309043480088,2.96521128680622,1.23563938946503,0.835375596043643,1.95463285643963,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0.789168805698781,0,0,17.1867496589487,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.44617335538842,0,0,0,0,1.74580229679155,0,0.225980740780532,0,0,0.443175571691151,0,0.0801588202515337,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.46429682005587,0,0,22.8711998223004,0.837847203816763,0.458320848023367,1.43574604915363,1.19807400299395,3.004582336956,2.23171457441873,0.873385142327441,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,2.04305109167363,0,0,0,2.92466059016951,0,0.425246896606173,0,2.36417121897595,0.629455057619977,0,0,0,2.1440859791201,3.97255182219259,0.25426853765475,0,0,0,0,0.082092520749339,0,0,1.17241786942466,1.32506888912221,1.16354660725395,2.11572162788304,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| |||
|short_description=p2@SMAP2 | |||
}} |
Revision as of 18:03, 10 January 2014
Short description: | p2@SMAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMAP2_5end |
Coexpression cluster: | C2301_CD14CD16_CD14_migratory_Dendritic_Basophils_Macrophage_myeloma |
Association with transcript: | -7bp_to_ENST00000435168_5end |
EntrezGene: | SMAP2 |
HGNC: | 25082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.01e-54 | 136 |
defensive cell | 1.96e-54 | 48 |
phagocyte | 1.96e-54 | 48 |
myeloid leukocyte | 4.68e-54 | 72 |
monopoietic cell | 7.34e-54 | 59 |
monocyte | 7.34e-54 | 59 |
monoblast | 7.34e-54 | 59 |
promonocyte | 7.34e-54 | 59 |
macrophage dendritic cell progenitor | 2.11e-53 | 61 |
nongranular leukocyte | 2.61e-50 | 115 |
classical monocyte | 2.90e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-47 | 42 |
granulocyte monocyte progenitor cell | 9.45e-47 | 67 |
myeloid lineage restricted progenitor cell | 5.72e-46 | 66 |
hematopoietic lineage restricted progenitor cell | 1.57e-43 | 120 |
hematopoietic stem cell | 2.20e-39 | 168 |
hematopoietic oligopotent progenitor cell | 2.18e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-38 | 161 |
hematopoietic cell | 8.99e-38 | 177 |
myeloid cell | 1.89e-35 | 108 |
common myeloid progenitor | 1.89e-35 | 108 |
intermediate monocyte | 1.98e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.98e-12 | 9 |
macrophage | 2.27e-08 | 6 |
B cell | 6.91e-08 | 14 |
mesenchymal cell | 1.62e-07 | 354 |
conventional dendritic cell | 4.37e-07 | 8 |
granulocyte | 5.91e-07 | 8 |
connective tissue cell | 6.27e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.21e-55 | 98 |
blood island | 4.21e-55 | 98 |
hemolymphoid system | 6.77e-51 | 108 |
bone marrow | 3.67e-42 | 76 |
immune system | 6.31e-38 | 93 |
bone element | 1.57e-37 | 82 |
skeletal element | 2.43e-32 | 90 |
skeletal system | 4.97e-28 | 100 |
lateral plate mesoderm | 5.17e-20 | 203 |
adult organism | 3.29e-19 | 114 |
blood | 3.55e-14 | 15 |
haemolymphatic fluid | 3.55e-14 | 15 |
organism substance | 3.55e-14 | 15 |
musculoskeletal system | 6.80e-11 | 167 |
mesoderm | 1.50e-07 | 315 |
mesoderm-derived structure | 1.50e-07 | 315 |
presumptive mesoderm | 1.50e-07 | 315 |