FFCP PHASE1:Hg19::chr1:203276836..203276855,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C500 | |||
|description=CAGE_peak_at_chr1:203276836..203276855,+ | |||
|id=chr1:203276836..203276855,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.07e-38!140;CL:0002057!7.28e-34!42;CL:0002031!3.52e-32!124;CL:0000860!3.20e-30!45;CL:0000766!1.47e-28!76;CL:0000988!6.45e-28!182;CL:0000037!7.74e-28!172;CL:0000566!7.74e-28!172;CL:0002087!1.07e-27!119;CL:0002032!1.54e-26!165;CL:0000837!1.54e-26!165;CL:0000839!3.84e-24!70;CL:0000557!8.64e-24!71;CL:0002009!3.22e-22!65;CL:0002194!8.04e-21!63;CL:0000576!8.04e-21!63;CL:0000040!8.04e-21!63;CL:0000559!8.04e-21!63;CL:0000763!9.18e-19!112;CL:0000049!9.18e-19!112;CL:0000838!7.48e-08!52;CL:0000542!1.64e-07!53;CL:0000051!1.64e-07!53;CL:0000094!2.49e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.41e-53;33!CL:0002057;6.41e-53;33!CL:0000473;8.57e-37;39!CL:0000234;8.57e-37;39!CL:0000576;1.11e-32;48!CL:0000766;1.68e-22;69!CL:0002087;1.74e-14;104!CL:0000738;2.01e-12;136!CL:0000763;8.48e-11;100!CL:0000094;1.08e-10;8!CL:0000081;5.54e-10;11!CL:0000988;2.64e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-57,42;CL:0002057,2.43e-57,42;CL:0000473,3.74e-52,48;CL:0000234,3.74e-52,48;CL:0000738,2.55e-48,136;CL:0000766,1.18e-44,72;CL:0002009,8.80e-41,61;CL:0002087,3.90e-40,115;CL:0002194,1.23e-39,59;CL:0000576,1.23e-39,59;CL:0000040,1.23e-39,59;CL:0000559,1.23e-39,59;CL:0002031,5.11e-38,120;CL:0000037,1.36e-37,168;CL:0000839,1.58e-36,66;CL:0000988,2.46e-36,177;CL:0000557,3.02e-36,67;CL:0002032,1.55e-33,161;CL:0000837,1.55e-33,161;CL:0000763,2.76e-29,108;CL:0000049,2.76e-29,108;CL:0000134,9.32e-12,354;CL:0002320,3.12e-11,361;CL:0000094,1.16e-10,8;CL:0000081,5.71e-10,11;CL:0000219,2.11e-09,386;CL:0000048,3.29e-07,427;CL:0000034,5.65e-07,441;CL:0000723,6.53e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.16e-40;42!CL:0000049;3.67e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.89e-23!102;UBERON:0003061!2.89e-23!102;UBERON:0002193!6.85e-22!112;UBERON:0002371!2.27e-19!80;UBERON:0001474!1.93e-17!86;UBERON:0002405!8.10e-14!115;UBERON:0004765!1.32e-13!101;UBERON:0001434!1.32e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.67e-33,98;UBERON:0003061,2.67e-33,98;UBERON:0002371,8.81e-31,76;UBERON:0002193,3.97e-29,108;UBERON:0001474,8.35e-28,82;UBERON:0002405,5.36e-25,93;UBERON:0004765,1.86e-24,90;UBERON:0001434,4.94e-21,100;UBERON:0003081,4.52e-15,203;UBERON:0002384,1.61e-10,371;UBERON:0002204,1.36e-09,167 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0.152826811495903,0.0821005894499457,0,1.18009283054671,1.53531759238885,0.464448369948228,0.919421224478927,0,0.369754010166788,0.309868802321207,0.142169232487422,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,0,0,1.16318591023652,0.755751887377619,1.69808842831471,3.0215774797739,4.11167888021826,3.71647645074124,5.75384784644301,4.35473201099471,10.1687358852092,2.75796544589295,1.93645405075148,2.70852973188684,2.82363509313907,3.82068610080984,6.29225756446237,7.34601341690166,2.56743221660875,5.11469700639233,0.989553900560148,2.39356389145958,1.27867425159808,3.48251086354301,1.70215567407342,6.22822248995575,3.26623264833766,2.08593167368081,2.82345498116652,2.42159801053347,3.68277635987565,3.79754864929061,3.16882929467913,2.12604299965044,0.628975936525128,0.898629049171961,1.50176892841506,0.803627933485401,0.855038231223746,1.79025009479181,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,2.34894875748376,1.91136614062614,0,1.12101712596307,0.263384084775077,0.590129310341499,1.17903228824749,3.90642848099067,0.668745981562712,1.30368906653436,1.89379122293893,0,1.33692548262208,0.883817722424512,0.886135578334485,1.08321545506006,0.640456598628376,0.390178042679635,0.328875809207352,1.38175008892924,0,1.33457906845854,1.07016331235885,2.09071047609954,0.226618685395132,2.29932296161153,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.511946444617674,0,0,0.821127996921047,0.201606743224732,3.20928234940209,1.88271725047639,0,0,0,0,0.50133791063589,0,0,0,0,0,0.175669571386252,0,0,0.370784442784429,0,0,0.398873881556595,0.715471872916026,2.85997455390064,1.85728750664782,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0,1.58040879591855,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0.383382679165211,0.985326475791887,0.616339038092582,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,3.45004119775228,2.31017465303547,0,0,0,0,0,0.749007023947182,11.966458368161,2.07207756718018,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,1.72571360654893,1.49418580924822,0.303127571446259,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,1.08890984861323,0,0,1.68471475667626,0.886860307073351,0,1.52234282769651,0,2.27858874869665,0,0.822724546172388,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0.957003479195758,0.0915975934018623,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,1.48260564340311,0.494255755786011,0.522109747527277,0.067401132980677,0,0,0.182454789215666,0,0,1.18375320854817,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0.195551382734803,0,0.640358984218058,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,1.95497680890578,0,0,0.399358000997982,2.14613024068285,0,0.268733889946905,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0.899895566206002,7.7380195455795,0,0,0.0788057072991982,0.262272940674991,0,0.179287339332845,0,0.714695326373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| |||
|short_description=p@chr1:203276836..203276855,+ | |||
}} |
Revision as of 23:31, 10 January 2014
Short description: | p@chr1:203276836..203276855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203276836..203276855, + |
Coexpression cluster: | C500_Neutrophils_Monocytederived_blood_CD14_Eosinophils_lung_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-57 | 42 |
defensive cell | 3.74e-52 | 48 |
phagocyte | 3.74e-52 | 48 |
leukocyte | 2.55e-48 | 136 |
myeloid leukocyte | 1.18e-44 | 72 |
macrophage dendritic cell progenitor | 8.80e-41 | 61 |
nongranular leukocyte | 3.90e-40 | 115 |
monopoietic cell | 1.23e-39 | 59 |
monocyte | 1.23e-39 | 59 |
monoblast | 1.23e-39 | 59 |
promonocyte | 1.23e-39 | 59 |
hematopoietic lineage restricted progenitor cell | 5.11e-38 | 120 |
hematopoietic stem cell | 1.36e-37 | 168 |
myeloid lineage restricted progenitor cell | 1.58e-36 | 66 |
hematopoietic cell | 2.46e-36 | 177 |
granulocyte monocyte progenitor cell | 3.02e-36 | 67 |
hematopoietic oligopotent progenitor cell | 1.55e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-33 | 161 |
myeloid cell | 2.76e-29 | 108 |
common myeloid progenitor | 2.76e-29 | 108 |
mesenchymal cell | 9.32e-12 | 354 |
connective tissue cell | 3.12e-11 | 361 |
granulocyte | 1.16e-10 | 8 |
blood cell | 5.71e-10 | 11 |
motile cell | 2.11e-09 | 386 |
multi fate stem cell | 3.29e-07 | 427 |
stem cell | 5.65e-07 | 441 |
somatic stem cell | 6.53e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.67e-33 | 98 |
blood island | 2.67e-33 | 98 |
bone marrow | 8.81e-31 | 76 |
hemolymphoid system | 3.97e-29 | 108 |
bone element | 8.35e-28 | 82 |
immune system | 5.36e-25 | 93 |
skeletal element | 1.86e-24 | 90 |
skeletal system | 4.94e-21 | 100 |
lateral plate mesoderm | 4.52e-15 | 203 |
connective tissue | 1.61e-10 | 371 |
musculoskeletal system | 1.36e-09 | 167 |