FFCP PHASE1:Hg19::chr1:204380854..204380865,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14951 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SWA1 | |||
|association_with_transcript=53bp_to_ENST00000367188_5end | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_3_at_PPP1R15B_5end | |||
|id=chr1:204380854..204380865,- | |||
|ontology_enrichment_celltype=CL:0000738!3.59e-26!140;CL:0000037!7.03e-21!172;CL:0000566!7.03e-21!172;CL:0000988!7.61e-20!182;CL:0000860!3.68e-19!45;CL:0002032!1.01e-18!165;CL:0000837!1.01e-18!165;CL:0000766!1.88e-18!76;CL:0002031!3.55e-18!124;CL:0002057!4.70e-18!42;CL:0002087!6.23e-17!119;CL:0000557!1.19e-15!71;CL:0000763!3.36e-14!112;CL:0000049!3.36e-14!112;CL:0002009!5.32e-13!65;CL:0000839!5.90e-13!70;CL:0002194!5.89e-12!63;CL:0000576!5.89e-12!63;CL:0000040!5.89e-12!63;CL:0000559!5.89e-12!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.78e-23;33!CL:0002057;3.78e-23;33!CL:0000473;2.17e-15;39!CL:0000234;2.17e-15;39!CL:0000576;5.53e-14;48!CL:0000766;8.63e-13;69!CL:0000094;1.71e-11;8!CL:0000081;5.82e-10;11!CL:0000451;1.66e-08;10!CL:0000624;2.22e-08;6!CL:0002087;2.51e-08;104!CL:0000738;1.34e-07;136!CL:0000453;5.73e-07;5!CL:0000988;7.41e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.61e-38,136;CL:0000766,1.41e-29,72;CL:0000988,2.31e-29,177;CL:0000037,7.40e-29,168;CL:0000860,3.04e-27,42;CL:0002057,3.04e-27,42;CL:0002032,1.16e-24,161;CL:0000837,1.16e-24,161;CL:0000557,2.82e-24,67;CL:0002031,6.16e-24,120;CL:0000473,2.24e-22,48;CL:0000234,2.24e-22,48;CL:0002087,7.72e-22,115;CL:0000763,1.77e-21,108;CL:0000049,1.77e-21,108;CL:0000839,2.03e-20,66;CL:0002009,5.43e-20,61;CL:0002194,4.93e-18,59;CL:0000576,4.93e-18,59;CL:0000040,4.93e-18,59;CL:0000559,4.93e-18,59;CL:0000094,1.66e-11,8;CL:0000081,5.69e-10,11;CL:0000624,1.81e-08,6;CL:0000451,1.88e-08,10;CL:0000453,5.44e-07,5;CL:0000134,6.05e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-19;42 | |||
|ontology_enrichment_disease=DOID:305!6.18e-09!106;DOID:0050687!8.50e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.07e-14!80;UBERON:0001474!5.70e-13!86;UBERON:0002390!6.27e-13!102;UBERON:0003061!6.27e-13!102;UBERON:0002193!1.41e-10!112;UBERON:0004765!7.17e-10!101;UBERON:0001434!7.17e-10!101;UBERON:0002405!2.52e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.07e-09;9!UBERON:0001557;1.07e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.77e-21,76;UBERON:0002390,1.57e-20,98;UBERON:0003061,1.57e-20,98;UBERON:0001474,2.34e-18,82;UBERON:0002193,3.59e-17,108;UBERON:0002405,1.31e-15,93;UBERON:0004765,1.56e-15,90;UBERON:0001434,1.09e-12,100;UBERON:0001737,8.40e-10,9 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,1.09220686065086,1.58260186937072,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0.534893840235659,0.246301768349837,0.0787107813136792,16.521299627654,11.1310525448192,20.9001766476703,0,0,0,0.232401601740905,0.284338464974843,2.05520307534393,22.1598163412751,21.0571669843649,27.5603805809132,0,0,0,0.290796477559129,0,0.970336244751265,2.78914844286822,2.05583944010913,2.78735733805593,22.7276989934499,24.3352671202646,15.6078271726466,7.23965929546899,7.74581620300591,8.12558919566051,0.941211697713023,2.45615535052061,2.02251136000576,11.0190201253525,11.2325159476633,13.4260796417799,5.60747210317417,13.1646014030277,12.3605177654481,8.12585868160035,7.37600792098482,11.8336227309159,20.8536392163097,18.7733850631273,15.8547856634735,4.23779651843358,12.1531619875896,8.22802207346299,0.211255286311942,2.97646019951061,1.67726916406701,0.898629049171961,2.4028302854641,2.08943262706204,0.285012743741249,0.59675003159727,0.182664153764634,0,0.546138611262131,0.889509253863555,3.41384178053206,0,0,0.661044872784862,0,37.5680559612236,40.5193660665948,45.4905141469022,11.8954195721123,16.8152568894461,0,45.4399568962954,44.8032269534048,27.1393978679352,0,1.95553359980154,3.31413464014313,3.89653456815823,1.00269411196656,3.24066498222321,1.32920336750173,3.5204502289452,0.640456598628376,0.390178042679635,0.164437904603676,0.276350017785848,1.44901542867526,1.63115219478266,1.33770414044857,2.09071047609954,0.226618685395132,7.2811893784365,5.15441168223945,5.06039384039006,0,0,0.950452044448374,0.451725357233318,0,0,0,0,54.4338206706778,43.0578715211447,40.6956574910665,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0.973269740605272,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0,1.48313777113772,0.97364218096405,0.696518949197069,1.19662164466979,8.10868122638163,15.4438625910635,3.34311751196608,0.596287222100115,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0.366403487860815,21.0848667897701,93.0672633955981,0.872188104285069,0.993943903390637,0,0.926864265692532,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0.250237039743928,0,0,0,0,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,4.73227200159376,2.86593973132773,2.89213235860178,4.08087699109858,2.83243277320128,2.37270619111097,2.29213223872279,2.35465758150415,3.46272441251751,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,15.7652236126702,0.44024217006613,40.2216544149098,19.8885535715407,30.5506688891839,0.317489471460845,0.381988425558278,0,0,0.411309970813294,0,0.571652865261156,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0.112085143993527,52.0161206933088,51.7506179662842,49.4120689677031,0.254094624222463,0,0,0.167516265334349,0,8.23907726341901,8.97484377612075,10.7748033493369,0.24538298343828,0,0.271265023699736,0.623912584592421,0.535286966391485,0.473107245101804,0.468565659970853,0,0,0,0,0.368738337083406,0.173767228936166,0,0,4.9624326269493,16.6099934630335,8.53820462427555,0,0,0.907170879989041,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,7.31591182698828,0,0.165018999841176,1.14853107599234,1.95018073810956,0,0.193341436584244,0,0.307007349452259,0,0.107420244868274,0.145016693914229,0.255679882248303,0.267096106940212,0.330569830721956,0,0.382838137483752,0.30347334256665,0.464845549297286,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.92947049429925,0,0.286822704408103,0.392996164052485,0.35667105148125,0,0.633322905892992,0.329294892959902,0,0,0,0.670302275535787,0,6.40177845282098,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0.962479855263359,2.20536194382929,0,0.432807638929335,0.355709216742071,0.7971313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| |||
|short_description=p3@PPP1R15B | |||
}} |
Revision as of 23:37, 10 January 2014
Short description: | p3@PPP1R15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP1R15B_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | 53bp_to_ENST00000367188_5end |
EntrezGene: | PPP1R15B |
HGNC: | 14951 |
UniProt: | Q5SWA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.61e-38 | 136 |
myeloid leukocyte | 1.41e-29 | 72 |
hematopoietic cell | 2.31e-29 | 177 |
hematopoietic stem cell | 7.40e-29 | 168 |
classical monocyte | 3.04e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.04e-27 | 42 |
hematopoietic oligopotent progenitor cell | 1.16e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-24 | 161 |
granulocyte monocyte progenitor cell | 2.82e-24 | 67 |
hematopoietic lineage restricted progenitor cell | 6.16e-24 | 120 |
defensive cell | 2.24e-22 | 48 |
phagocyte | 2.24e-22 | 48 |
nongranular leukocyte | 7.72e-22 | 115 |
myeloid cell | 1.77e-21 | 108 |
common myeloid progenitor | 1.77e-21 | 108 |
myeloid lineage restricted progenitor cell | 2.03e-20 | 66 |
macrophage dendritic cell progenitor | 5.43e-20 | 61 |
monopoietic cell | 4.93e-18 | 59 |
monocyte | 4.93e-18 | 59 |
monoblast | 4.93e-18 | 59 |
promonocyte | 4.93e-18 | 59 |
granulocyte | 1.66e-11 | 8 |
blood cell | 5.69e-10 | 11 |
CD4-positive, alpha-beta T cell | 1.81e-08 | 6 |
dendritic cell | 1.88e-08 | 10 |
Langerhans cell | 5.44e-07 | 5 |
mesenchymal cell | 6.05e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.77e-21 | 76 |
hematopoietic system | 1.57e-20 | 98 |
blood island | 1.57e-20 | 98 |
bone element | 2.34e-18 | 82 |
hemolymphoid system | 3.59e-17 | 108 |
immune system | 1.31e-15 | 93 |
skeletal element | 1.56e-15 | 90 |
skeletal system | 1.09e-12 | 100 |
larynx | 8.40e-10 | 9 |