FFCP PHASE1:Hg19::chr1:241695236..241695264,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8564 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6381 | |||
|TSSclassifier=not | |||
|UniProt=O15229 | |||
|association_with_transcript=-169bp_to_ENST00000366558,ENST00000366559,NM_003679_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_KMO_5end | |||
|id=chr1:241695236..241695264,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.83e-80!42;CL:0000860!1.75e-74!45;CL:0002009!2.87e-73!65;CL:0002194!3.75e-71!63;CL:0000576!3.75e-71!63;CL:0000040!3.75e-71!63;CL:0000559!3.75e-71!63;CL:0000557!1.53e-66!71;CL:0000839!2.06e-63!70;CL:0000766!6.73e-58!76;CL:0002087!3.51e-47!119;CL:0002031!1.91e-42!124;CL:0000738!2.26e-41!140;CL:0000763!1.13e-39!112;CL:0000049!1.13e-39!112;CL:0000037!3.16e-32!172;CL:0000566!3.16e-32!172;CL:0000988!5.05e-30!182;CL:0002032!5.19e-30!165;CL:0000837!5.19e-30!165;CL:0000134!2.77e-11!358;CL:0002320!6.56e-11!365;CL:0000219!1.37e-09!390;CL:0002393!3.82e-08!9;CL:0002397!3.82e-08!9;CL:0000048!5.15e-08!430;CL:0000723!8.62e-08!436;CL:0000034!1.68e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.85e-73;33!CL:0002057;9.85e-73;33!CL:0000473;1.79e-57;39!CL:0000234;1.79e-57;39!CL:0000576;1.53e-32;48!CL:0000766;2.75e-21;69!CL:0000763;3.27e-11;100!CL:0002087;7.09e-10;104!CL:0000738;2.43e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-64,42;CL:0002057,1.03e-64,42;CL:0000473,2.94e-64,48;CL:0000234,2.94e-64,48;CL:0002194,4.05e-51,59;CL:0000576,4.05e-51,59;CL:0000040,4.05e-51,59;CL:0000559,4.05e-51,59;CL:0002009,2.01e-49,61;CL:0000839,1.26e-45,66;CL:0000557,6.23e-45,67;CL:0000766,9.44e-42,72;CL:0000763,1.91e-27,108;CL:0000049,1.91e-27,108;CL:0002087,1.09e-25,115;CL:0002031,1.46e-24,120;CL:0000738,1.69e-21,136;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.84e-43;42!CL:0000049;1.77e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.57e-58!80;UBERON:0002390!3.70e-56!102;UBERON:0003061!3.70e-56!102;UBERON:0001474!8.90e-54!86;UBERON:0002193!1.73e-50!112;UBERON:0004765!9.18e-45!101;UBERON:0001434!9.18e-45!101;UBERON:0002405!1.74e-43!115;UBERON:0002204!3.27e-24!167;UBERON:0003081!1.86e-22!216;UBERON:0002384!3.05e-11!375;UBERON:0000926!2.61e-07!448;UBERON:0004120!2.61e-07!448;UBERON:0006603!2.61e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-39,76;UBERON:0001474,1.55e-36,82;UBERON:0004765,3.45e-33,90;UBERON:0002405,4.44e-32,93;UBERON:0002390,2.23e-30,98;UBERON:0003061,2.23e-30,98;UBERON:0001434,9.56e-30,100;UBERON:0002193,1.91e-27,108;UBERON:0002204,3.24e-17,167;UBERON:0003081,7.27e-14,203;UBERON:0000926,2.79e-08,315;UBERON:0004120,2.79e-08,315;UBERON:0006603,2.79e-08,315;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.651032612147555,0,0,0.257575567634187,0,0,0.242584061187816,1.39457422143411,0.822335776043652,1.23882548358041,0,0.256160706529101,0.47296445977717,3.44745680736619,7.74581620300591,1.35426486594342,0,1.63743690034707,2.24723484445085,4.28517449319264,7.38136762275015,8.95071976118658,0,0.398927315243264,0,0.870627715885752,1.70215567407342,3.11411124497787,0,1.5644487552606,0.217188844705117,0.605399502633369,3.31449872388808,7.27863491114034,0.211255286311942,0,0,0,0,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@KMO | |||
}} |
Revision as of 01:02, 11 January 2014
Short description: | p9@KMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KMO_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -169bp_to_ENST00000366558, ENST00000366559, NM_003679_5end |
EntrezGene: | KMO |
HGNC: | 6381 |
UniProt: | O15229 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.03e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-64 | 42 |
defensive cell | 2.94e-64 | 48 |
phagocyte | 2.94e-64 | 48 |
monopoietic cell | 4.05e-51 | 59 |
monocyte | 4.05e-51 | 59 |
monoblast | 4.05e-51 | 59 |
promonocyte | 4.05e-51 | 59 |
macrophage dendritic cell progenitor | 2.01e-49 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-45 | 66 |
granulocyte monocyte progenitor cell | 6.23e-45 | 67 |
myeloid leukocyte | 9.44e-42 | 72 |
myeloid cell | 1.91e-27 | 108 |
common myeloid progenitor | 1.91e-27 | 108 |
nongranular leukocyte | 1.09e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.46e-24 | 120 |
leukocyte | 1.69e-21 | 136 |
hematopoietic oligopotent progenitor cell | 6.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-18 | 161 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-39 | 76 |
bone element | 1.55e-36 | 82 |
skeletal element | 3.45e-33 | 90 |
immune system | 4.44e-32 | 93 |
hematopoietic system | 2.23e-30 | 98 |
blood island | 2.23e-30 | 98 |
skeletal system | 9.56e-30 | 100 |
hemolymphoid system | 1.91e-27 | 108 |
musculoskeletal system | 3.24e-17 | 167 |
lateral plate mesoderm | 7.27e-14 | 203 |
mesoderm | 2.79e-08 | 315 |
mesoderm-derived structure | 2.79e-08 | 315 |
presumptive mesoderm | 2.79e-08 | 315 |
connective tissue | 9.92e-07 | 371 |