FFCP PHASE1:Hg19::chr1:243418447..243418457,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28920 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=60bp_to_ENST00000523581_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_CEP170_5end | |||
|id=chr1:243418447..243418457,- | |||
|ontology_enrichment_celltype=CL:0002057!2.38e-26!42;CL:0000860!3.44e-26!45;CL:0002194!6.52e-23!63;CL:0000576!6.52e-23!63;CL:0000040!6.52e-23!63;CL:0000559!6.52e-23!63;CL:0002009!1.11e-22!65;CL:0000763!3.90e-21!112;CL:0000049!3.90e-21!112;CL:0000557!6.82e-20!71;CL:0000766!8.28e-20!76;CL:0000839!9.13e-20!70;CL:0000037!3.48e-13!172;CL:0000566!3.48e-13!172;CL:0002032!2.53e-12!165;CL:0000837!2.53e-12!165;CL:0000988!6.39e-12!182;CL:0002087!4.04e-11!119;CL:0000738!6.40e-11!140;CL:0002031!3.16e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-56;33!CL:0002057;1.52e-56;33!CL:0000473;1.22e-38;39!CL:0000234;1.22e-38;39!CL:0000576;5.67e-35;48!CL:0000766;1.92e-21;69!CL:0000763;4.11e-12;100!CL:0002087;4.39e-08;104!CL:0000767;3.28e-07;3!CL:0002393;5.97e-07;6!CL:0002397;5.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.27e-62,42;CL:0002057,4.27e-62,42;CL:0000473,5.41e-53,48;CL:0000234,5.41e-53,48;CL:0002009,5.90e-44,61;CL:0002194,6.19e-43,59;CL:0000576,6.19e-43,59;CL:0000040,6.19e-43,59;CL:0000559,6.19e-43,59;CL:0000766,3.51e-42,72;CL:0000557,1.99e-41,67;CL:0000839,2.54e-37,66;CL:0000763,1.16e-32,108;CL:0000049,1.16e-32,108;CL:0000738,1.41e-19,136;CL:0000988,3.84e-19,177;CL:0000037,1.05e-18,168;CL:0002032,6.71e-18,161;CL:0000837,6.71e-18,161;CL:0002031,2.57e-17,120;CL:0002087,3.44e-17,115;CL:0000767,2.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-45;42!CL:0000049;1.64e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.70e-16!86;UBERON:0002371!1.38e-15!80;UBERON:0002390!2.26e-14!102;UBERON:0003061!2.26e-14!102;UBERON:0004765!2.62e-13!101;UBERON:0001434!2.62e-13!101;UBERON:0002193!8.06e-12!112;UBERON:0000073!2.09e-08!94;UBERON:0001016!2.09e-08!94;UBERON:0002405!2.53e-08!115;UBERON:0001017!3.63e-07!82;UBERON:0002204!4.83e-07!167;UBERON:0005743!7.49e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.04e-37,82;UBERON:0002371,2.62e-37,76;UBERON:0004765,2.40e-33,90;UBERON:0002390,1.39e-31,98;UBERON:0003061,1.39e-31,98;UBERON:0001434,7.07e-29,100;UBERON:0002405,1.67e-28,93;UBERON:0002193,1.39e-27,108;UBERON:0002204,1.34e-15,167;UBERON:0003081,3.44e-13,203 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0.123121058076788,0,0,0,0.136874425072884,0.753255837568817,0.229240217243854,0.0821005894499457,0.157421562627358,1.57345710739562,1.15148819429164,1.54816123316076,0,0,0,0.154934401160603,0.995184627411951,1.17440175733939,3.87796785972314,4.41197784434312,2.17010870715852,0.223915474239924,0.647787332037959,0.257575567634187,2.18097358169347,3.02300754951048,2.18325655069035,3.0215774797739,1.23350366406548,4.02618282163635,2.01384674625505,1.7931249457037,3.07426898855161,2.41321976515633,3.22742341791913,4.06279459783025,1.88242339542605,3.547779950752,3.82029923556644,3.97909060082173,2.56743221660875,5.11469700639233,1.9791078011203,3.19141852194611,2.55734850319616,5.22376629531451,4.53908179752912,4.9825779919646,1.7587406567972,1.5644487552606,0.434377689410233,3.63239701580021,6.2607198117886,4.1140110367315,0.633765858935825,1.4882300997553,0.419317291016752,1.23561494261145,0.901061357049038,0.964353520182481,0.570025487482497,0.79566670879636,0.730656615058536,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,1.68152568894461,0.526768169550154,0.196709770113833,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0.649094787309367,0.870648686496336,0.26591592103773,0.715471872916026,0,1.48583000531826,0,0,0,0.56530794192401,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0.949265659568129,0.549605231791222,0,0,0,0,0.379891534993739,0.397227542439656,0.860509862246441,0,0,1.06748995729705,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0,0.206651562351531,0,0,0,0,0.673344455816265,0,0.554128230968366,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0,0.309157587715317,0.257640540045629,0,1.18143432568886,0.389748020644795,0.252433774244115,0,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.661763836394364,0.217879444092406,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.277765335475589,0.325808305310325,0,0,0.695582429850461,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.410952645100767,0,0.224170287987055,0.197030760201927,0,0.128343036279748,1.52456774533478,2.60279707715243,0,1.00509759200609,0.637938751653163,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.620304078368662,0.862856803274467,0.640365346820666,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0.771048469013278,0.532685175939381,0.657017248110473,0.519254429183621,0.813472649219715,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0.328014645699706,0.325378394664303,0.103041011647722,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.4046311234222,0,0,1.3940745403212,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0,0.38126038784765,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.842516912477962,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.860468113224309,0.0982490410131212,0.7133421029625,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.577076851905779,0.284567373393656,0.159426272728822,0.199579371432817,0.766021480529467,0.423347165447766,2.921597462471,0.561594356226918,0.684704037099577,0.313359791546046,0,0.338583555603207,0.1605880751037,1.00899853595524,0,0.343505344755765,0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| |||
|short_description=p10@CEP170 | |||
}} |
Revision as of 01:04, 11 January 2014
Short description: | p10@CEP170 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CEP170_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 60bp_to_ENST00000523581_5end |
EntrezGene: | CEP170 |
HGNC: | 28920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.27e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-62 | 42 |
defensive cell | 5.41e-53 | 48 |
phagocyte | 5.41e-53 | 48 |
macrophage dendritic cell progenitor | 5.90e-44 | 61 |
monopoietic cell | 6.19e-43 | 59 |
monocyte | 6.19e-43 | 59 |
monoblast | 6.19e-43 | 59 |
promonocyte | 6.19e-43 | 59 |
myeloid leukocyte | 3.51e-42 | 72 |
granulocyte monocyte progenitor cell | 1.99e-41 | 67 |
myeloid lineage restricted progenitor cell | 2.54e-37 | 66 |
myeloid cell | 1.16e-32 | 108 |
common myeloid progenitor | 1.16e-32 | 108 |
leukocyte | 1.41e-19 | 136 |
hematopoietic cell | 3.84e-19 | 177 |
hematopoietic stem cell | 1.05e-18 | 168 |
hematopoietic oligopotent progenitor cell | 6.71e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.71e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 2.57e-17 | 120 |
nongranular leukocyte | 3.44e-17 | 115 |
basophil | 2.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.04e-37 | 82 |
bone marrow | 2.62e-37 | 76 |
skeletal element | 2.40e-33 | 90 |
hematopoietic system | 1.39e-31 | 98 |
blood island | 1.39e-31 | 98 |
skeletal system | 7.07e-29 | 100 |
immune system | 1.67e-28 | 93 |
hemolymphoid system | 1.39e-27 | 108 |
musculoskeletal system | 1.34e-15 | 167 |
lateral plate mesoderm | 3.44e-13 | 203 |