FFCP PHASE1:Hg19::chr10:18940410..18940422,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23529 | |||
|TSSclassifier=weak | |||
|UniProt=Q8TEA1 | |||
|association_with_transcript=127bp_to_NM_182543,uc010qcp.1_5end | |||
|description=CAGE_peak_3_at_NSUN6_5end | |||
|id=chr10:18940410..18940422,- | |||
|ontology_enrichment_celltype=CL:0002032!1.44e-15!165;CL:0000837!1.44e-15!165;CL:0000037!4.16e-15!172;CL:0000566!4.16e-15!172;CL:0000988!2.10e-14!182;CL:0000738!4.93e-13!140;CL:0002031!4.86e-11!124;CL:0002057!5.85e-10!42;CL:0000763!7.17e-10!112;CL:0000049!7.17e-10!112;CL:0000860!2.08e-09!45;CL:0002087!4.41e-09!119;CL:0000766!3.92e-07!76;CL:0000134!8.36e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.92e-11;33!CL:0002057;8.92e-11;33!CL:0000791;8.27e-08;18!CL:0000789;8.27e-08;18!CL:0002419;8.27e-08;18!CL:0000473;2.01e-07;39!CL:0000234;2.01e-07;39!CL:0000766;7.53e-07;69!CL:0000097;7.53e-07;5!CL:0000624;7.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.02e-16,161;CL:0000837,1.02e-16,161;CL:0000037,3.21e-16,168;CL:0000738,6.16e-16,136;CL:0000988,1.73e-15,177;CL:0002031,1.67e-14,120;CL:0000766,4.96e-13,72;CL:0000763,1.34e-12,108;CL:0000049,1.34e-12,108;CL:0000860,6.07e-12,42;CL:0002057,6.07e-12,42;CL:0002087,1.20e-10,115;CL:0000839,3.40e-10,66;CL:0000557,4.08e-10,67;CL:0000473,8.83e-10,48;CL:0000234,8.83e-10,48;CL:0000134,1.88e-09,354;CL:0002320,6.34e-09,361;CL:0000791,4.87e-08,18;CL:0000789,4.87e-08,18;CL:0002420,4.87e-08,18;CL:0002419,4.87e-08,18;CL:0000790,4.87e-08,18;CL:0000219,1.68e-07,386;CL:0002009,2.33e-07,61;CL:0000624,3.46e-07,6;CL:0000097,6.69e-07,5;CL:0002028,6.69e-07,5;CL:0002194,7.96e-07,59;CL:0000576,7.96e-07,59;CL:0000040,7.96e-07,59;CL:0000559,7.96e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-08;42!CL:0000790;8.27e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.45e-08,98;UBERON:0003061,2.45e-08,98;UBERON:0002384,3.27e-08,371;UBERON:0002371,3.58e-08,76;UBERON:0001474,3.91e-07,82;UBERON:0002193,6.65e-07,108 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0,0,0.547497700291537,0,1.14620108621927,1.31360943119913,0.708397031823113,1.18009283054671,0.767658796194425,0.928896739896456,0,0.30120591877825,0.369754010166788,0.387336002901508,0.710846162437108,0,2.21598163412751,1.20326668482085,0.217010870715852,0.223915474239924,0,0.515151135268373,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,1.7261543539329,1.0246428261164,1.89185783910868,1.03423704220986,1.93645405075148,2.70852973188684,0.188242339542605,0.545812300115692,0.898893937780338,2.44867113896722,1.28371610830437,5.11469700639233,0,0.398927315243264,0.852449501065388,2.03146467040009,2.26954089876456,2.4912889959823,2.00998932205395,1.0429658368404,1.73751075764093,1.21079900526674,0.736555271975129,1.58231193720442,0.211255286311942,0.850417199860174,1.25795187305026,0.22465726229299,0.150176892841506,0.16072558669708,0.570025487482497,0,0.182664153764634,1.75996244461323,0.546138611262131,2.66852776159066,0,0,0.574752439954483,0,1.90810750907073,0,0.587237189370939,0.764546456250458,1.32171328579026,2.80254281490768,1.84368859342554,1.57367816091066,1.57204305099666,1.02800749499755,1.33749196312542,1.62961133316795,2.36723902867367,0,4.12218690475142,1.76763544484902,2.43687284041983,3.24964636518019,2.30564375506215,2.60118695119756,1.31550323682941,3.31620021343018,0.579606171470105,0.741432815810302,0.535081656179426,0,0.679856056185397,0.383220493601921,1.71813722741315,0.759059076058509,0.318565414324097,1.30216690771284,0,4.51725357233318,2.68771883424279,1.24930726552346,0.236777252044017,0,1.41124720257313,0.267440195783507,0.434473211648397,0,0,0.255725123687061,1.44575660953827,0,0.144846518960824,0,0,0.472674085820339,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0,0.17859945656816,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.662045904066094,2.0078563452417,0.354668382198357,1.12135520028461,1.06748995729705,0,0.622422070799533,0.269421344139376,0.817309515567294,0.302714855289863,0,0,0,0.570471821544449,0,1.76151747965647,2.10434827678571,1.54495887372473,0.61246251376468,0,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0.226864366320042,0.89694817844431,0.213557388818567,0,1.50045548042201,0.618315175430633,2.06112432036503,0.18611685633159,0.337552664482532,0.974370051611986,1.00973509697646,0.184099797284599,0.80823028409406,0.710019185033229,1.20902517873168,0,0,0,0,0.609868530647977,0.397589304964456,0.232387885739037,0.310983165046111,0.252320850875628,1.82488679537915,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0.71181185733329,0,0,0.769494313892781,0,0,0,0,1.26755034821831,5.89696330006576,2.95394953340702,0.441463099414651,0.368965315629341,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,3.4486426652716,0.880484340132261,3.31724984865235,1.44119953416961,4.03975786964416,0.317489471460845,0,0,0,0.205654985406647,0,0,0.336393253036082,0.43596006883328,0.1466765716419,0.387815147273333,0,0,0.531876233169741,0,0.514414748524284,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0.112085143993527,0.985153801009636,1.07813787429759,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,2.07207756718018,0.12269149171914,0,0.542530047399471,0.415941723061614,0,0,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.82707210449155,1.07857100409308,0.213455115606889,0,0,0,0,0.61384789315225,0.280660094433074,0.256278298511402,0,0,1.48418066444991,0.154209693802656,0,0,0,0.464841513839837,0.604297247958111,0,0,0,0.182091168006717,0,0.902399225814824,0,0,0,0,0,0.510281115829547,0,0,0.270946437543853,0,0,0,0,1.09629938322967,0,0,0,0.650756789328606,1.33953315142039,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0.924291702687866,0.767518373630648,1.51620229732984,0,0.290033387828457,0.426133137080504,0.0890320356467374,0,0.192190067365106,0.638063562472921,0,0.464845549297286,2.20368642781448,0,0,0,0,0,0.715624433709956,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0,0,0,0.421258456238981,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0.941438007767792,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,3.8908398671563,2.16012574895246,0,0.106824071127473,0.962479855263359,0.9801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| |||
|short_description=p3@NSUN6 | |||
}} |
Revision as of 02:02, 11 January 2014
Short description: | p3@NSUN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NSUN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 127bp_to_NM_182543, uc010qcp.1_5end |
EntrezGene: | NSUN6 |
HGNC: | 23529 |
UniProt: | Q8TEA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.45e-08 | 98 |
blood island | 2.45e-08 | 98 |
connective tissue | 3.27e-08 | 371 |
bone marrow | 3.58e-08 | 76 |
bone element | 3.91e-07 | 82 |
hemolymphoid system | 6.65e-07 | 108 |