FFCP PHASE1:Hg19::chr10:132517789..132517796,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr10:132517789..132517796,+ | |||
|id=chr10:132517789..132517796,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.91e-37!42;CL:0000860!3.49e-34!45;CL:0002009!6.03e-25!65;CL:0002194!6.07e-23!63;CL:0000576!6.07e-23!63;CL:0000040!6.07e-23!63;CL:0000559!6.07e-23!63;CL:0000557!1.53e-22!71;CL:0000839!2.56e-20!70;CL:0000766!1.89e-18!76;CL:0000763!5.86e-13!112;CL:0000049!5.86e-13!112;CL:0002031!2.39e-11!124;CL:0002087!1.53e-10!119;CL:0000738!1.25e-09!140;CL:0002032!1.28e-07!165;CL:0000837!1.28e-07!165;CL:0000037!3.66e-07!172;CL:0000566!3.66e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-33;33!CL:0002057;5.06e-33;33!CL:0000473;1.09e-26;39!CL:0000234;1.09e-26;39!CL:0000576;1.25e-14;48!CL:0000766;2.58e-10;69!CL:0000763;7.86e-08;100!CL:0002087;7.20e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.64e-29,42;CL:0002057,8.64e-29,42;CL:0000473,3.23e-25,48;CL:0000234,3.23e-25,48;CL:0002194,3.31e-20,59;CL:0000576,3.31e-20,59;CL:0000040,3.31e-20,59;CL:0000559,3.31e-20,59;CL:0002009,1.47e-19,61;CL:0000839,4.14e-18,66;CL:0000557,7.62e-18,67;CL:0000766,1.25e-16,72;CL:0000763,3.78e-11,108;CL:0000049,3.78e-11,108;CL:0002087,1.79e-10,115;CL:0002031,4.85e-10,120;CL:0000738,7.34e-09,136;CL:0002032,1.77e-07,161;CL:0000837,1.77e-07,161;CL:0000037,3.66e-07,168;CL:0000988,8.58e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-18;42!CL:0000049;2.10e-07;108 | |||
|ontology_enrichment_disease=DOID:178!7.73e-07!1;DOID:326!7.73e-07!1;DOID:3978!7.73e-07!1;DOID:3394!7.73e-07!1;DOID:5844!7.73e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.32e-19!80;UBERON:0002390!2.01e-18!102;UBERON:0003061!2.01e-18!102;UBERON:0001474!5.51e-18!86;UBERON:0002193!2.06e-16!112;UBERON:0002405!7.06e-16!115;UBERON:0004765!9.03e-15!101;UBERON:0001434!9.03e-15!101;UBERON:0002204!1.69e-08!167;UBERON:0001896!1.75e-08!3;UBERON:0005290!1.75e-08!3;UBERON:0010096!1.75e-08!3;UBERON:0002298!6.63e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.06e-16,76;UBERON:0001474,1.24e-14,82;UBERON:0004765,2.37e-13,90;UBERON:0002405,6.30e-13,93;UBERON:0002390,2.83e-12,98;UBERON:0003061,2.83e-12,98;UBERON:0001434,4.95e-12,100;UBERON:0002193,3.78e-11,108;UBERON:0002204,3.32e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,10.3423704220986,15.4916324060118,14.8969135253776,0,0,0.224723484445085,4.89734227793444,8.02322567690234,7.67204550958849,0,0,0,0,0,0,0.251248665256743,1.5644487552606,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.672962778429,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931120714437869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:132517789..132517796,+ | |||
}} |
Revision as of 05:37, 11 January 2014
Short description: | p@chr10:132517789..132517796, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:132517789..132517796, + |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.64e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.64e-29 | 42 |
defensive cell | 3.23e-25 | 48 |
phagocyte | 3.23e-25 | 48 |
monopoietic cell | 3.31e-20 | 59 |
monocyte | 3.31e-20 | 59 |
monoblast | 3.31e-20 | 59 |
promonocyte | 3.31e-20 | 59 |
macrophage dendritic cell progenitor | 1.47e-19 | 61 |
myeloid lineage restricted progenitor cell | 4.14e-18 | 66 |
granulocyte monocyte progenitor cell | 7.62e-18 | 67 |
myeloid leukocyte | 1.25e-16 | 72 |
myeloid cell | 3.78e-11 | 108 |
common myeloid progenitor | 3.78e-11 | 108 |
nongranular leukocyte | 1.79e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.85e-10 | 120 |
leukocyte | 7.34e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.77e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-07 | 161 |
hematopoietic stem cell | 3.66e-07 | 168 |
hematopoietic cell | 8.58e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.06e-16 | 76 |
bone element | 1.24e-14 | 82 |
skeletal element | 2.37e-13 | 90 |
immune system | 6.30e-13 | 93 |
hematopoietic system | 2.83e-12 | 98 |
blood island | 2.83e-12 | 98 |
skeletal system | 4.95e-12 | 100 |
hemolymphoid system | 3.78e-11 | 108 |
musculoskeletal system | 3.32e-07 | 167 |