FFCP PHASE1:Hg19::chr12:53200838..53200857,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU692075_5end | |||
|coexpression_cluster_id=C649 | |||
|description=CAGE_peak_1_at_CU692075_5end | |||
|id=chr12:53200838..53200857,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.38e-11!43;CL:0000223!5.46e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000322;3.24e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.58e-34;1 | |||
|ontology_enrichment_disease=DOID:3151!5.31e-10!1;DOID:3149!5.31e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;7.06e-34;1!DOID:3149;7.06e-34;1!DOID:3451;1.07e-17;2!DOID:4159;1.07e-17;2!DOID:0060122;1.07e-17;2!DOID:3910;1.27e-17;2!DOID:4362;6.55e-08;5!DOID:3908;7.49e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.06e-34,1;DOID:3149,7.06e-34,1;DOID:3451,1.07e-17,2;DOID:4159,1.07e-17,2;DOID:0060122,1.07e-17,2;DOID:3910,1.27e-17,2;DOID:4362,6.55e-08,5;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.22e-17!2;UBERON:0001042!9.48e-14!10;UBERON:0009145!9.48e-14!10;UBERON:0006562!1.62e-12!11;UBERON:0001723!2.27e-12!3;UBERON:0001033!2.27e-12!3;UBERON:0010056!2.27e-12!3;UBERON:0001004!3.26e-12!72;UBERON:0000065!1.81e-11!53;UBERON:0003126!3.18e-11!7;UBERON:0001005!3.18e-11!7;UBERON:0000072!1.25e-10!46;UBERON:0002372!3.74e-10!1;UBERON:0001961!3.74e-10!1;UBERON:0001744!3.74e-10!1;UBERON:0001735!3.74e-10!1;UBERON:0000166!5.49e-10!21;UBERON:0007196!9.24e-10!14;UBERON:0001558!9.24e-10!14;UBERON:0001043!1.76e-09!4;UBERON:0009143!1.76e-09!4;UBERON:0006834!1.91e-09!1;UBERON:0002581!2.46e-09!1;UBERON:0001041!1.45e-08!98;UBERON:0005178!1.92e-08!34;UBERON:0002224!1.92e-08!34;UBERON:0000161!3.32e-08!35;UBERON:0005181!3.46e-08!35;UBERON:0000974!6.68e-08!10;UBERON:0000078!8.01e-08!18;UBERON:0000165!1.93e-07!28;UBERON:0000930!1.93e-07!28;UBERON:0001557!2.63e-07!19;UBERON:0000077!3.09e-07!130;UBERON:0004921!3.09e-07!129;UBERON:0004185!3.09e-07!129;UBERON:0004119!3.68e-07!169;UBERON:0000925!3.68e-07!169;UBERON:0006595!3.68e-07!169;UBERON:0001007!8.48e-07!155;UBERON:0001555!8.48e-07!155;UBERON:0007026!8.48e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.84e-34;1!UBERON:0001961;1.84e-34;1!UBERON:0001744;1.84e-34;1!UBERON:0001042;1.84e-34;1!UBERON:0001735;1.84e-34;1!UBERON:0006562;5.48e-18;2!UBERON:0004903;1.27e-17;2!UBERON:0002173;1.27e-17;2!UBERON:0002186;1.27e-17;2!UBERON:0001043;2.07e-12;3!UBERON:0001723;2.31e-12;3!UBERON:0001033;2.31e-12;3!UBERON:0004821;3.24e-12;3!UBERON:0007499;3.24e-12;3!UBERON:0003215;3.24e-12;3!UBERON:0010368;3.24e-12;3!UBERON:0009911;3.24e-12;3!UBERON:0002299;3.24e-12;3!UBERON:0006524;3.24e-12;3!UBERON:0008874;3.24e-12;3!UBERON:0002169;3.24e-12;3!UBERON:0004894;3.24e-12;3!UBERON:0000014;1.57e-09;4!UBERON:0009856;1.70e-09;4!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.84e-34,1;UBERON:0001961,1.84e-34,1;UBERON:0001744,1.84e-34,1;UBERON:0001735,1.84e-34,1;UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0001043,2.07e-12,3;UBERON:0009143,2.07e-12,3;UBERON:0001723,2.31e-12,3;UBERON:0001033,2.31e-12,3;UBERON:0010056,2.31e-12,3;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0000014,1.57e-09,4;UBERON:0001557,5.35e-08,19;UBERON:0000072,4.59e-07,47;UBERON:0000166,4.94e-07,22;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,3.48559360696508,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0868577147956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0.0620747142958579,0,0,0,0.653150243690884,4.79126621519393,15.6930283523989,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@CU692075 | |||
}} |
Revision as of 13:38, 11 January 2014
Short description: | p1@CU692075 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_CU692075_5end |
Coexpression cluster: | C649_tonsil_esophagus_tongue_throat_trachea_cervical_lymph |
Association with transcript: | 0bp_to_CU692075_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.84e-34 | 1 |
mucosa-associated lymphoid tissue | 1.84e-34 | 1 |
lymphoid tissue | 1.84e-34 | 1 |
tonsillar ring | 1.84e-34 | 1 |
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
esophagus | 2.07e-12 | 3 |
esophageal region | 2.07e-12 | 3 |
tongue | 2.31e-12 | 3 |
gustatory system | 2.31e-12 | 3 |
future tongue | 2.31e-12 | 3 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
zone of skin | 1.57e-09 | 4 |
upper respiratory tract | 5.35e-08 | 19 |
segment of respiratory tract | 4.59e-07 | 47 |
oral opening | 4.94e-07 | 22 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.06e-34 | 1 |
keratoacanthoma | 7.06e-34 | 1 |
skin carcinoma | 1.07e-17 | 2 |
skin cancer | 1.07e-17 | 2 |
integumentary system cancer | 1.07e-17 | 2 |
lung adenocarcinoma | 1.27e-17 | 2 |
cervical cancer | 6.55e-08 | 5 |
non-small cell lung carcinoma | 7.49e-08 | 5 |