FFCP PHASE1:Hg19::chr12:69719024..69719043,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C821 | |||
|description=CAGE_peak_at_chr12:69719024..69719043,- | |||
|id=chr12:69719024..69719043,- | |||
|ontology_enrichment_celltype=CL:0002057!5.07e-38!42;CL:0000860!3.45e-35!45;CL:0002009!5.98e-34!65;CL:0000557!1.56e-33!71;CL:0000763!2.03e-32!112;CL:0000049!2.03e-32!112;CL:0002194!5.97e-32!63;CL:0000576!5.97e-32!63;CL:0000040!5.97e-32!63;CL:0000559!5.97e-32!63;CL:0000839!4.69e-31!70;CL:0000766!6.82e-31!76;CL:0000738!1.05e-24!140;CL:0000037!7.97e-24!172;CL:0000566!7.97e-24!172;CL:0002032!2.45e-23!165;CL:0000837!2.45e-23!165;CL:0000988!3.89e-22!182;CL:0002031!1.75e-20!124;CL:0000990!2.31e-19!8;CL:0002087!5.59e-18!119;CL:0000453!1.27e-16!5;CL:0000451!9.82e-16!10;CL:0000134!8.18e-08!358;CL:0000840!1.11e-07!5;CL:0001029!1.11e-07!5;CL:0002320!1.57e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.68e-30;33!CL:0002057;1.68e-30;33!CL:0000453;1.89e-26;5!CL:0000473;3.36e-22;39!CL:0000234;3.36e-22;39!CL:0000576;2.07e-17;48!CL:0000817;1.07e-15;1!CL:0000990;5.27e-15;8!CL:0000451;2.17e-12;10!CL:0000766;1.51e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.87e-26,42;CL:0002057,1.87e-26,42;CL:0000453,1.98e-26,5;CL:0000473,4.70e-23,48;CL:0000234,4.70e-23,48;CL:0000763,1.00e-20,108;CL:0000049,1.00e-20,108;CL:0002194,2.76e-18,59;CL:0000576,2.76e-18,59;CL:0000040,2.76e-18,59;CL:0000559,2.76e-18,59;CL:0002009,1.14e-17,61;CL:0000839,2.74e-16,66;CL:0000738,2.86e-16,136;CL:0000557,4.89e-16,67;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000990,5.40e-15,8;CL:0000766,7.00e-15,72;CL:0000988,2.49e-14,177;CL:0000451,2.21e-12,10;CL:0002087,3.29e-11,115;CL:0002031,1.06e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-20;42!CL:0000049;3.74e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.98e-33!102;UBERON:0003061!4.98e-33!102;UBERON:0002371!6.25e-32!80;UBERON:0002193!8.11e-32!112;UBERON:0002405!7.99e-31!115;UBERON:0001474!2.49e-29!86;UBERON:0004765!3.59e-24!101;UBERON:0001434!3.59e-24!101;UBERON:0002204!1.91e-12!167;UBERON:0003081!2.65e-12!216;UBERON:0004177!1.40e-10!7;UBERON:0002384!3.82e-07!375;UBERON:0002106!4.27e-07!3;UBERON:0004854!4.27e-07!3;UBERON:0009034!4.27e-07!3;UBERON:0002095!4.27e-07!3;UBERON:0004782!4.27e-07!3;UBERON:0003281!4.27e-07!3;UBERON:0009664!4.27e-07!3;UBERON:0002296!4.27e-07!3;UBERON:0005602!4.27e-07!3;UBERON:0001179!4.27e-07!3;UBERON:0006293!4.27e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-14,76;UBERON:0001474,5.53e-13,82;UBERON:0004765,9.16e-12,90;UBERON:0002405,2.32e-11,93;UBERON:0002390,9.68e-11,98;UBERON:0003061,9.68e-11,98;UBERON:0001434,1.65e-10,100;UBERON:0002193,1.14e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0.290796477559129,0,0.485168122375632,0,0,0,2.8769239232215,1.7931249457037,2.83778675866302,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,2.63881040149373,1.59570926097305,2.98357325372886,0,0,0.622822248995575,1.50749199154046,1.5644487552606,2.17188844705117,0.605399502633369,0,0.949387162322653,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01976898167023,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,1.00899853595524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,3.18875616752071,3.43487327937273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:69719024..69719043,- | |||
}} |
Revision as of 14:34, 11 January 2014
Short description: | p@chr12:69719024..69719043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:69719024..69719043, - |
Coexpression cluster: | C821_migratory_CD14_immature_CD14CD16_Dendritic_Macrophage_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.87e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.87e-26 | 42 |
Langerhans cell | 1.98e-26 | 5 |
defensive cell | 4.70e-23 | 48 |
phagocyte | 4.70e-23 | 48 |
myeloid cell | 1.00e-20 | 108 |
common myeloid progenitor | 1.00e-20 | 108 |
monopoietic cell | 2.76e-18 | 59 |
monocyte | 2.76e-18 | 59 |
monoblast | 2.76e-18 | 59 |
promonocyte | 2.76e-18 | 59 |
macrophage dendritic cell progenitor | 1.14e-17 | 61 |
myeloid lineage restricted progenitor cell | 2.74e-16 | 66 |
leukocyte | 2.86e-16 | 136 |
granulocyte monocyte progenitor cell | 4.89e-16 | 67 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
conventional dendritic cell | 5.40e-15 | 8 |
myeloid leukocyte | 7.00e-15 | 72 |
hematopoietic cell | 2.49e-14 | 177 |
dendritic cell | 2.21e-12 | 10 |
nongranular leukocyte | 3.29e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.06e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.60e-14 | 76 |
bone element | 5.53e-13 | 82 |
skeletal element | 9.16e-12 | 90 |
immune system | 2.32e-11 | 93 |
hematopoietic system | 9.68e-11 | 98 |
blood island | 9.68e-11 | 98 |
skeletal system | 1.65e-10 | 100 |
hemolymphoid system | 1.14e-09 | 108 |