FFCP PHASE1:Hg19::chr12:96640858..96640878,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3325 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000549985_5end | |||
|description=CAGE_peak_6_at_ELK3_5end | |||
|id=chr12:96640858..96640878,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.56e-09!42;CL:0000860!2.02e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.28e-21;33!CL:0002057;4.28e-21;33!CL:0000473;7.16e-16;39!CL:0000234;7.16e-16;39!CL:0000576;5.03e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.25e-19,42;CL:0002057,3.25e-19,42;CL:0000473,2.56e-17,48;CL:0000234,2.56e-17,48;CL:0002194,2.00e-12,59;CL:0000576,2.00e-12,59;CL:0000040,2.00e-12,59;CL:0000559,2.00e-12,59;CL:0002009,8.41e-12,61;CL:0000839,2.04e-10,66;CL:0000557,3.63e-10,67;CL:0000766,5.05e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;4.28e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.34e-12,203;UBERON:0000926,5.88e-10,315;UBERON:0004120,5.88e-10,315;UBERON:0006603,5.88e-10,315;UBERON:0002371,4.81e-09,76;UBERON:0001474,6.42e-08,82;UBERON:0004765,2.65e-07,90;UBERON:0002390,5.50e-07,98;UBERON:0003061,5.50e-07,98;UBERON:0002405,6.42e-07,93 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0.491467873003018,0,0.436882744260345,1.05506791291381,0.618831764800233,0,0,1.20538905604795,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.547497700291537,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0,0.232401601740905,0,0,0,1.40381113229099,0.434021741431704,0.447830948479849,0.32389366601898,0,4.50734540216651,3.40088349319928,2.91100873425379,2.78914844286822,2.46700732813095,2.78735733805593,0.575384784644301,0.512321413058201,0.709446689665756,1.72372840368309,0,1.35426486594342,2.82363509313907,2.72906150057846,1.12361742222542,3.67300670845083,1.28371610830437,2.55734850319616,1.31940520074686,2.59302754908121,0.426224750532694,2.90209238628584,1.70215567407342,1.86846674698672,1.00499466102697,3.65038042894141,0.65156653411535,0.605399502633369,1.10483290796269,0,0,0,0,0.112328631146495,0,0.48217676009124,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0,0,0.276350017785848,0,0.296573126324121,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.604820229674197,1.06976078313403,0,0,0,0.12786256184353,0.361439152384566,0,0.869079113764942,0.795285947051099,0.486634870302636,0.378139268656271,1.55210578223795,0.351339142772504,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.38856200643038,0,1.25849830862972,1.6507082516404,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,1.61131726843659,0,1.46437234528902,0.367663080345869,0.81014194788176,1.60739510911344,1.34717623575702,1.12611480483322,0,0,0.366403487860815,0,0,0,0,0.506522046658319,0,0.286836620748814,1.41867352879343,1.12135520028461,0,0.98667019366864,0.311211035399766,0.404132016209064,0.163461903113459,0.454072282934794,0,0,0.936480230490962,0,1.49448680551801,1.17434498643765,1.45685649931318,1.96631129383148,0.204154171254893,0.982674538494144,1.03325781175765,0,1.23633464639278,0,0.718618141816238,0.673344455816265,1.7516592782075,0.831192346452549,0.438977620880838,0,0.150238058906597,0.453728732640084,0.538168907066586,0.427114777637135,0.423863802319124,0.600182192168805,0.412210116953756,0,0.37223371266318,0.337552664482532,0.487185025805993,0.504867548488229,0.460249493211497,0.484938170456436,1.06502877754984,0.403008392910561,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0,2.21446636387394,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0.658501712451753,0,0.703702806881416,1.20364978706088,0,1.03993478527958,0,0.927443239800615,0.117408694235822,0.577465791044295,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0.447792613514241,1.16253575405585,0,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.616964956219941,0.300343057843917,0,0.672786506072164,1.30788020649984,1.98013371716565,0.517086863031111,0,0.845302752556,1.06375246633948,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0.791951872933429,0,0.871533458600294,0.99972991182057,0,1.00451418286425,0,0.239624855491583,1.14861935834114,2.85273810081437,0.723906533337896,2.05476322550383,0.358121926479791,0.112085143993527,0,0.431255149719035,0,0.76228387266739,0,0,0,0,0,0,0,0.858840442033979,1.00034104211935,0.542530047399471,0.207970861530807,0.713715955188647,0.157702415033935,0.468565659970853,0,0,3.10419213877515,0,0,0.521301686808497,0.195801157462741,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0.604780586659361,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0.804269605718038,1.48418066444991,2.00472601943452,0.532685175939381,0.0821271560138091,1.55776328755086,0.232420756919918,0,0.802025881213139,0.828728900423067,0.114814448164607,0.546273504020151,0.917870904715969,0.451199612907412,1.00119938235739,0,1.46139224653261,0.633309773357254,1.13733384070897,0.170093705276516,1.29549549661284,0,0.270946437543853,0,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0.27470839445503,0,0.574265537996172,0.650060246036521,0,0.773365746336976,0.462145851343933,0.307007349452259,0.689182862422653,0.644521469209642,1.59518363305651,0.596586391912706,0.356128142586949,0.495854746082934,0.192190067365106,0.127612712494584,0,0.929691098594572,0,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,0.731140468893853,2.113002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| |||
|short_description=p6@ELK3 | |||
}} |
Revision as of 15:20, 11 January 2014
Short description: | p6@ELK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ELK3_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000549985_5end |
EntrezGene: | ELK3 |
HGNC: | 3325 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.25e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.25e-19 | 42 |
defensive cell | 2.56e-17 | 48 |
phagocyte | 2.56e-17 | 48 |
monopoietic cell | 2.00e-12 | 59 |
monocyte | 2.00e-12 | 59 |
monoblast | 2.00e-12 | 59 |
promonocyte | 2.00e-12 | 59 |
macrophage dendritic cell progenitor | 8.41e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.04e-10 | 66 |
granulocyte monocyte progenitor cell | 3.63e-10 | 67 |
myeloid leukocyte | 5.05e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.34e-12 | 203 |
mesoderm | 5.88e-10 | 315 |
mesoderm-derived structure | 5.88e-10 | 315 |
presumptive mesoderm | 5.88e-10 | 315 |
bone marrow | 4.81e-09 | 76 |
bone element | 6.42e-08 | 82 |
skeletal element | 2.65e-07 | 90 |
hematopoietic system | 5.50e-07 | 98 |
blood island | 5.50e-07 | 98 |
immune system | 6.42e-07 | 93 |