FFCP PHASE1:Hg19::chr12:102271387..102271426,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25645 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z4T0 | |||
|association_with_transcript=-34bp_to_ENST00000544152_5end | |||
|coexpression_cluster_id=C809 | |||
|description=CAGE_peak_3_at_DRAM1_5end | |||
|id=chr12:102271387..102271426,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.00e-21!682;CL:0000144!5.74e-21!625;CL:0000548!6.76e-21!679;CL:0000004!6.76e-21!679;CL:0000255!6.76e-21!679;CL:0002194!9.06e-17!63;CL:0000576!9.06e-17!63;CL:0000040!9.06e-17!63;CL:0000559!9.06e-17!63;CL:0002371!2.52e-16!591;CL:0002057!8.11e-16!42;CL:0002009!2.49e-15!65;CL:0000860!2.65e-15!45;CL:0000766!4.27e-15!76;CL:0000557!5.32e-15!71;CL:0000839!7.34e-15!70;CL:0000063!4.41e-12!578;CL:0000222!6.94e-12!119;CL:0000003!7.27e-12!722;CL:0000048!3.82e-11!430;CL:0000723!1.50e-10!436;CL:0000034!2.34e-10!444;CL:0000220!4.55e-08!246;CL:0000359!7.53e-08!32;CL:0002321!8.25e-08!248;CL:0000213!8.67e-08!57;CL:0000215!8.67e-08!57;CL:0000192!2.14e-07!42;CL:0000514!2.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.63e-15;39!CL:0000234;3.63e-15;39!CL:0000860;9.37e-15;33!CL:0002057;9.37e-15;33!CL:0000576;4.71e-10;48!CL:0000766;3.11e-08;69!CL:0000359;1.46e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.45e-19,48;CL:0000234,2.45e-19,48;CL:0002194,1.38e-16,59;CL:0000576,1.38e-16,59;CL:0000040,1.38e-16,59;CL:0000559,1.38e-16,59;CL:0000860,4.98e-16,42;CL:0002057,4.98e-16,42;CL:0002009,6.06e-15,61;CL:0000766,6.11e-15,72;CL:0000839,1.36e-14,66;CL:0000557,1.37e-14,67;CL:0000222,2.75e-12,121;CL:0000048,5.98e-12,427;CL:0000723,2.29e-11,433;CL:0000034,4.06e-11,441;CL:0002321,3.44e-08,250;CL:0000213,3.71e-08,58;CL:0000215,3.71e-08,58;CL:0000359,6.06e-08,32;CL:0000192,1.35e-07,43;CL:0000514,1.35e-07,43;CL:0000134,9.60e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.12e-20!448;UBERON:0004120!5.12e-20!448;UBERON:0006603!5.12e-20!448;UBERON:0003081!8.60e-20!216;UBERON:0002204!3.32e-17!167;UBERON:0002371!5.98e-16!80;UBERON:0002193!1.93e-14!112;UBERON:0004765!8.62e-14!101;UBERON:0001434!8.62e-14!101;UBERON:0002405!1.26e-13!115;UBERON:0001474!8.10e-13!86;UBERON:0002390!9.74e-13!102;UBERON:0003061!9.74e-13!102;UBERON:0000055!8.48e-10!69;UBERON:0000480!3.45e-09!626;UBERON:0000467!4.28e-09!625;UBERON:0004872!6.14e-09!84;UBERON:0000468!1.95e-08!659;UBERON:0004535!4.23e-08!110;UBERON:0002049!4.98e-08!79;UBERON:0007798!4.98e-08!79;UBERON:0001981!5.77e-08!60;UBERON:0007500!5.77e-08!60;UBERON:0004537!5.77e-08!60;UBERON:0006965!5.77e-08!60;UBERON:0001009!1.23e-07!113;UBERON:0001637!1.88e-07!42;UBERON:0003509!1.88e-07!42;UBERON:0004572!1.88e-07!42;UBERON:0004573!5.33e-07!33;UBERON:0004571!5.33e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.86e-22,315;UBERON:0004120,4.86e-22,315;UBERON:0006603,4.86e-22,315;UBERON:0003081,4.10e-19,203;UBERON:0002204,5.54e-17,167;UBERON:0002405,7.56e-16,93;UBERON:0002371,1.54e-15,76;UBERON:0002193,3.43e-14,108;UBERON:0001434,2.82e-13,100;UBERON:0004765,6.68e-13,90;UBERON:0002390,1.78e-12,98;UBERON:0003061,1.78e-12,98;UBERON:0001474,1.88e-12,82;UBERON:0000055,1.71e-09,68;UBERON:0004872,1.16e-08,83;UBERON:0004535,6.30e-08,109;UBERON:0002049,9.62e-08,78;UBERON:0007798,9.62e-08,78;UBERON:0007500,1.18e-07,59;UBERON:0001981,1.18e-07,59;UBERON:0004537,1.18e-07,59;UBERON:0006965,1.18e-07,59;UBERON:0001637,1.54e-07,42;UBERON:0003509,1.54e-07,42;UBERON:0004572,1.54e-07,42;UBERON:0001009,2.17e-07,112;UBERON:0004573,4.42e-07,33;UBERON:0004571,4.42e-07,33 | |||
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| |||
|short_description=p3@DRAM1 | |||
}} |
Revision as of 15:31, 11 January 2014
Short description: | p3@DRAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DRAM1_5end |
Coexpression cluster: | C809_CD14_Olfactory_Synoviocyte_Monocytederived_Mesothelial_Fibroblast_Smooth |
Association with transcript: | -34bp_to_ENST00000544152_5end |
EntrezGene: | DRAM1 |
HGNC: | 25645 |
UniProt: | B7Z4T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.45e-19 | 48 |
phagocyte | 2.45e-19 | 48 |
monopoietic cell | 1.38e-16 | 59 |
monocyte | 1.38e-16 | 59 |
monoblast | 1.38e-16 | 59 |
promonocyte | 1.38e-16 | 59 |
classical monocyte | 4.98e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.98e-16 | 42 |
macrophage dendritic cell progenitor | 6.06e-15 | 61 |
myeloid leukocyte | 6.11e-15 | 72 |
myeloid lineage restricted progenitor cell | 1.36e-14 | 66 |
granulocyte monocyte progenitor cell | 1.37e-14 | 67 |
mesodermal cell | 2.75e-12 | 121 |
multi fate stem cell | 5.98e-12 | 427 |
somatic stem cell | 2.29e-11 | 433 |
stem cell | 4.06e-11 | 441 |
embryonic cell | 3.44e-08 | 250 |
lining cell | 3.71e-08 | 58 |
barrier cell | 3.71e-08 | 58 |
vascular associated smooth muscle cell | 6.06e-08 | 32 |
smooth muscle cell | 1.35e-07 | 43 |
smooth muscle myoblast | 1.35e-07 | 43 |
mesenchymal cell | 9.60e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.86e-22 | 315 |
mesoderm-derived structure | 4.86e-22 | 315 |
presumptive mesoderm | 4.86e-22 | 315 |
lateral plate mesoderm | 4.10e-19 | 203 |
musculoskeletal system | 5.54e-17 | 167 |
immune system | 7.56e-16 | 93 |
bone marrow | 1.54e-15 | 76 |
hemolymphoid system | 3.43e-14 | 108 |
skeletal system | 2.82e-13 | 100 |
skeletal element | 6.68e-13 | 90 |
hematopoietic system | 1.78e-12 | 98 |
blood island | 1.78e-12 | 98 |
bone element | 1.88e-12 | 82 |
vessel | 1.71e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 1.16e-08 | 83 |
cardiovascular system | 6.30e-08 | 109 |
vasculature | 9.62e-08 | 78 |
vascular system | 9.62e-08 | 78 |
epithelial tube open at both ends | 1.18e-07 | 59 |
blood vessel | 1.18e-07 | 59 |
blood vasculature | 1.18e-07 | 59 |
vascular cord | 1.18e-07 | 59 |
artery | 1.54e-07 | 42 |
arterial blood vessel | 1.54e-07 | 42 |
arterial system | 1.54e-07 | 42 |
circulatory system | 2.17e-07 | 112 |
systemic artery | 4.42e-07 | 33 |
systemic arterial system | 4.42e-07 | 33 |