FFCP PHASE1:Hg19::chr12:104759029..104759033,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:104759029..104759033,+ | |||
|id=chr12:104759029..104759033,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.48e-16;2!CL:0000174;4.19e-11;3!CL:0000319;5.97e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,5.99e-16,2;CL:0000174,6.01e-11,3;CL:0000319,4.19e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-09;1 | |||
|ontology_enrichment_disease=DOID:162!4.51e-27!235;DOID:14566!1.81e-26!239;DOID:0050687!3.55e-22!143;DOID:305!9.58e-17!106;DOID:0050686!2.06e-12!137;DOID:1749!1.73e-07!14;DOID:0050615!2.38e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3030;5.97e-09;1!DOID:3112;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-13,106;DOID:0050687,7.29e-11,143;DOID:3030,4.19e-09,1;DOID:3112,5.75e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;4.19e-11;3!UBERON:0001235;4.19e-11;3!UBERON:0006858;4.19e-11;3!UBERON:0000941;5.97e-09;1!UBERON:0001785;5.97e-09;1!UBERON:0002464;5.97e-09;1!UBERON:0004904;5.97e-09;1!UBERON:0001021;5.97e-09;1!UBERON:0003343;9.55e-09;4!UBERON:0004785;9.55e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.01e-11,3;UBERON:0001235,6.01e-11,3;UBERON:0006858,6.01e-11,3;UBERON:0000941,5.31e-09,1;UBERON:0001785,5.31e-09,1;UBERON:0002464,5.31e-09,1;UBERON:0004904,5.31e-09,1;UBERON:0001021,5.31e-09,1;UBERON:0003902,5.31e-09,1;UBERON:0005425,5.31e-09,1;UBERON:0003343,7.01e-09,4;UBERON:0004785,7.01e-09,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0.822335776043652,0.309706370895104,0.575384784644301,2.0492856522328,0.47296445977717,0,0.645484683583826,0,0,0.272906150057846,0,0.918251677112708,0.641858054152187,0,0,1.19678194572979,0.426224750532694,0.290209238628584,1.13477044938228,0,2.76373531782418,0.521482918420201,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,1.71528151186722,0,0,0.142283686696828,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,1.13654458722565,0,0,0,0,0.140669416410513,0.667852230137435,0.16480387422676,0,0.398495976502139,0,0,0.409074730008619,0.123084805461069,0,0.718946809178615,1.43216939740487,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.344743373241465,0.874813840149763,0,0,0,0,0,0,0,0.435753854075961,0.139423744278603,0,0.797594390929008,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.75901493089674,0,0.210998064528027,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,2.31694369112849,1.88359751044335,0,1.13843818411917,0.138674673013139,0.173559738335131,0.391969589657511,0.783532859223623,0,0.51595809741485,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,1.28254112402454,0,0,0,0,0.514784993585894,0.576219191952599,3.10631338913581,0.235694034616795,0.543616824294456,0.732219924186332,1.4279750469085,0,0,0,0,0.429765441419957,0,0,0,0,0.998395002494955,0,0,0,0.360299883542404,0,0,0,0,3.24810688998671,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0.316801009558219,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.453248366080503,0,0,0,0,1.53978154095896,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0.691743174681154,0.124980407962107,0.606596470166591,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,1.15571898244382,1.28664954824955,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0.675769762612291,0,0.345430341731199,0.303859956177382,0,0,0,0,0,1.47463745252232,0.211312123358627,0.19998739585493,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0.371807292777007,0,0.318004350653419,0.0788617450012534,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,1.57036349601641,2.71330363699803,0.183428598521679,0.346576998451015,0.381382095467167,0,0,0,0,0,0,1.31017534008077,0.295712172434091,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0.171488009437418,0.135939465953663,0,0.472775363535873,0.333694205676207,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0.23248285073625,0.173858272302579,2.40513409419076,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0.955538938977433,0.223710863595585,0,0.365753774946808,0,0.205325613712494,0,0,0,0,0,2.59775988689608,0,0.301925687133347,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0,0.299823467774787,0,0.705789743431384,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr12:104759029..104759033,+ | |||
}} |
Revision as of 15:36, 11 January 2014
Short description: | p@chr12:104759029..104759033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:104759029..104759033, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 5.99e-16 | 2 |
steroid hormone secreting cell | 6.01e-11 | 3 |
mucus secreting cell | 4.19e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 6.01e-11 | 3 |
adrenal cortex | 6.01e-11 | 3 |
adrenal/interrenal gland | 6.01e-11 | 3 |
cranial nerve II | 5.31e-09 | 1 |
cranial nerve | 5.31e-09 | 1 |
nerve trunk | 5.31e-09 | 1 |
nerve connecting eye with brain | 5.31e-09 | 1 |
nerve | 5.31e-09 | 1 |
retinal neural layer | 5.31e-09 | 1 |
presumptive neural retina | 5.31e-09 | 1 |
mucosa of oral region | 7.01e-09 | 4 |
respiratory system mucosa | 7.01e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-13 | 106 |
cell type cancer | 7.29e-11 | 143 |
mucinous adenocarcinoma | 4.19e-09 | 1 |
papillary adenocarcinoma | 5.75e-09 | 1 |