FFCP PHASE1:Hg19::chr13:49550207..49550223,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20296 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000378383_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_FNDC3A_5end | |||
|id=chr13:49550207..49550223,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.73e-33!140;CL:0002057!3.64e-32!42;CL:0000860!2.90e-29!45;CL:0002087!1.80e-28!119;CL:0000766!2.43e-28!76;CL:0002031!1.03e-26!124;CL:0000037!1.25e-26!172;CL:0000566!1.25e-26!172;CL:0000988!2.58e-24!182;CL:0002194!1.24e-23!63;CL:0000576!1.24e-23!63;CL:0000040!1.24e-23!63;CL:0000559!1.24e-23!63;CL:0002032!3.96e-23!165;CL:0000837!3.96e-23!165;CL:0002009!5.03e-23!65;CL:0000557!6.08e-23!71;CL:0000839!8.82e-23!70;CL:0000763!1.75e-17!112;CL:0000049!1.75e-17!112;CL:0000134!2.52e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.97e-70;33!CL:0002057;2.97e-70;33!CL:0000473;9.45e-51;39!CL:0000234;9.45e-51;39!CL:0000576;2.48e-47;48!CL:0000766;3.67e-34;69!CL:0002087;2.84e-19;104!CL:0000763;1.94e-15;100!CL:0000738;2.89e-14;136!CL:0000094;5.75e-14;8!CL:0000081;1.32e-12;11!CL:0002393;1.28e-09;6!CL:0002397;1.28e-09;6!CL:0000988;1.58e-09;177!CL:0000624;3.33e-09;6!CL:0000219;9.89e-08;193!CL:0000623;1.54e-07;3!CL:0000767;2.82e-07;3!CL:0000084;6.75e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-82,42;CL:0002057,1.01e-82,42;CL:0000473,1.00e-74,48;CL:0000234,1.00e-74,48;CL:0000766,9.54e-74,72;CL:0000738,1.20e-66,136;CL:0002194,2.12e-63,59;CL:0000576,2.12e-63,59;CL:0000040,2.12e-63,59;CL:0000559,2.12e-63,59;CL:0002009,6.10e-61,61;CL:0002087,1.04e-58,115;CL:0000839,1.83e-58,66;CL:0000557,2.06e-57,67;CL:0002031,1.24e-53,120;CL:0000037,2.03e-52,168;CL:0000988,1.28e-50,177;CL:0002032,2.99e-48,161;CL:0000837,2.99e-48,161;CL:0000763,1.43e-44,108;CL:0000049,1.43e-44,108;CL:0000134,1.00e-20,354;CL:0002320,5.71e-20,361;CL:0000219,2.57e-17,386;CL:0000034,3.11e-15,441;CL:0000048,8.57e-15,427;CL:0000723,2.46e-14,433;CL:0000094,2.68e-14,8;CL:0000081,5.98e-13,11;CL:0000624,2.40e-09,6;CL:0002393,9.63e-09,9;CL:0002397,9.63e-09,9;CL:0000623,1.20e-07,3;CL:0000825,1.20e-07,3;CL:0000767,1.70e-07,3;CL:0000084,6.90e-07,25;CL:0000827,6.90e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-58;42!CL:0000049;4.33e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.26e-25!102;UBERON:0003061!9.26e-25!102;UBERON:0002371!4.13e-22!80;UBERON:0002193!5.63e-22!112;UBERON:0001474!1.13e-18!86;UBERON:0002405!2.74e-16!115;UBERON:0004765!7.28e-16!101;UBERON:0001434!7.28e-16!101;UBERON:0002204!8.53e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.84e-54,76;UBERON:0002390,1.03e-49,98;UBERON:0003061,1.03e-49,98;UBERON:0001474,2.93e-49,82;UBERON:0002405,5.38e-44,93;UBERON:0002193,7.88e-44,108;UBERON:0004765,9.30e-44,90;UBERON:0001434,4.08e-38,100;UBERON:0002384,6.09e-19,371;UBERON:0003081,7.31e-18,203;UBERON:0002204,7.88e-18,167;UBERON:0000926,4.18e-08,315;UBERON:0004120,4.18e-08,315;UBERON:0006603,4.18e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,1.57345710739562,2.68680578668049,1.85779347979291,0,0,0,0,0,1.17440175733939,2.76997704265939,3.20871115952227,3.25516306073778,0.223915474239924,0,1.03030227053675,2.61716829803216,3.40088349319928,1.69808842831471,6.50801303335917,7.81218987241469,5.57471467611186,6.90461741573161,9.73410684810582,11.5876292645407,6.20542225325913,3.87290810150296,9.47985406160392,3.76484679085209,3.547779950752,6.29225756446237,4.28517449319264,12.5162320559677,9.59005688698562,6.59702600373432,6.58230070151385,6.39337125799041,5.22376629531451,4.53908179752912,3.11411124497787,8.79370328398601,9.90817544998383,11.5110087693712,1.81619850790011,9.20694089968912,8.22802207346299,1.90129757680748,1.06302149982522,0.209658645508376,2.2465726229299,2.25265339262259,2.08943262706204,0.570025487482497,1.59133341759272,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,2.93618594685469,0.382273228125229,1.32171328579026,5.04457706683382,0.263384084775077,1.96709770113833,1.57204305099666,2.05601498999509,0.334372990781356,0,0,0,0.779873198196215,2.65145316727353,0.443067789167242,1.62482318259009,0.25618263945135,0.650296737799391,0.164437904603676,0,0.579606171470105,1.18629250529648,0.802622484269139,0,0.339928028092699,1.53288197440768,1.03088233644789,1.01207876807801,0.318565414324097,0,0.950452044448374,0.301150238155546,0.255973222308837,1.24930726552346,0.236777252044017,0,2.01606743224732,0.802320587350522,1.30341963494519,0,0,0,0,1.00267582127178,0,0,0.486634870302636,0.283604451492204,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,2.62339686735876,1.14398982156026,0.74291500265913,0,0,0,1.13061588384802,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,6.58902087180316,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.538168907066586,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.231860809950154,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,3.4486426652716,0.528290604079356,0,0.288239906833923,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0,0.224170287987055,1.97030760201927,2.58753089831421,2.05348858047597,0.508189248444927,0,1.54657762555539,0.502548796003046,0,2.99602809578873,0,6.63064821497657,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,1.6541442089831,1.72571360654893,0.960548020230999,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0.229723400206959,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0.28853842595289,0.213425530045242,0,0,0.383010740264733,0,0,0.561594356226918,0.456469358066384,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0.503865495708552,0.306806047506464,1.23084805461069,0.311039587661807,0,0,0.511572370226872,0.0986434056369336,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0.183195186803725,0.533034776018635,1.02193298195737,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,1.77912677208373,0,0.522109747527277,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0,0.394584402849391,0,0,0.189559738885464,0.450970258243478,0,0,0.330991955875499,0,0,0,0,0,0,0,0.5241800047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| |||
|short_description=p10@FNDC3A | |||
}} |
Revision as of 17:46, 11 January 2014
Short description: | p10@FNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FNDC3A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 2bp_to_ENST00000378383_5end |
EntrezGene: | FNDC3A |
HGNC: | 20296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.84e-54 | 76 |
hematopoietic system | 1.03e-49 | 98 |
blood island | 1.03e-49 | 98 |
bone element | 2.93e-49 | 82 |
immune system | 5.38e-44 | 93 |
hemolymphoid system | 7.88e-44 | 108 |
skeletal element | 9.30e-44 | 90 |
skeletal system | 4.08e-38 | 100 |
connective tissue | 6.09e-19 | 371 |
lateral plate mesoderm | 7.31e-18 | 203 |
musculoskeletal system | 7.88e-18 | 167 |
mesoderm | 4.18e-08 | 315 |
mesoderm-derived structure | 4.18e-08 | 315 |
presumptive mesoderm | 4.18e-08 | 315 |