FFCP PHASE1:Hg19::chr13:99960198..99960210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473194,uc001voh.2_5end | |||
|description=CAGE_peak_12_at_UBAC2_5end | |||
|id=chr13:99960198..99960210,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.05e-66!140;CL:0002057!1.06e-60!42;CL:0000860!5.01e-56!45;CL:0002031!1.23e-55!124;CL:0002087!9.58e-54!119;CL:0000037!4.66e-51!172;CL:0000566!4.66e-51!172;CL:0002032!8.33e-50!165;CL:0000837!8.33e-50!165;CL:0000988!1.97e-47!182;CL:0000557!5.33e-46!71;CL:0002009!1.05e-45!65;CL:0000766!3.07e-42!76;CL:0002194!1.24e-41!63;CL:0000576!1.24e-41!63;CL:0000040!1.24e-41!63;CL:0000559!1.24e-41!63;CL:0000839!2.80e-41!70;CL:0000763!9.86e-35!112;CL:0000049!9.86e-35!112;CL:0000134!2.51e-19!358;CL:0002320!1.17e-18!365;CL:0000219!2.66e-16!390;CL:0000451!3.21e-15!10;CL:0000453!6.15e-15!5;CL:0000990!1.21e-14!8;CL:0000048!3.30e-14!430;CL:0000723!8.50e-14!436;CL:0000034!2.89e-13!444;CL:0000542!5.08e-13!53;CL:0000051!5.08e-13!53;CL:0000838!7.03e-12!52;CL:0000623!2.94e-08!3;CL:0000825!2.94e-08!3;CL:0000840!2.23e-07!5;CL:0001029!2.23e-07!5;CL:0001014!8.60e-07!2;CL:0001016!8.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-20;33!CL:0002057;1.01e-20;33!CL:0000576;3.02e-18;48!CL:0000473;4.48e-16;39!CL:0000234;4.48e-16;39!CL:0002393;7.08e-12;6!CL:0002397;7.08e-12;6!CL:0000766;1.33e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.64e-31,42;CL:0002057,4.64e-31,42;CL:0000473,4.10e-27,48;CL:0000234,4.10e-27,48;CL:0002194,1.40e-21,59;CL:0000576,1.40e-21,59;CL:0000040,1.40e-21,59;CL:0000559,1.40e-21,59;CL:0002009,7.27e-21,61;CL:0000839,2.90e-19,66;CL:0000557,5.69e-19,67;CL:0000766,1.25e-17,72;CL:0000763,2.35e-14,108;CL:0000049,2.35e-14,108;CL:0000738,2.96e-11,136;CL:0002087,7.71e-11,115;CL:0002031,2.32e-10,120;CL:0002032,2.20e-09,161;CL:0000837,2.20e-09,161;CL:0000037,5.88e-09,168;CL:0000988,1.86e-08,177;CL:0002393,3.42e-08,9;CL:0002397,3.42e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-21;42 | |||
|ontology_enrichment_disease=DOID:0060058!6.13e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.63e-42!80;UBERON:0002390!4.66e-39!102;UBERON:0003061!4.66e-39!102;UBERON:0001474!2.51e-38!86;UBERON:0002193!1.48e-34!112;UBERON:0004765!4.28e-31!101;UBERON:0001434!4.28e-31!101;UBERON:0002405!7.49e-28!115;UBERON:0002384!9.58e-18!375;UBERON:0002204!9.42e-16!167;UBERON:0003081!1.42e-12!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.23e-19,98;UBERON:0003061,2.23e-19,98;UBERON:0002193,1.58e-17,108;UBERON:0002405,8.01e-17,93;UBERON:0002371,1.11e-16,76;UBERON:0001474,1.99e-15,82;UBERON:0004765,5.17e-14,90;UBERON:0001434,1.48e-12,100;UBERON:0003081,6.06e-09,203;UBERON:0002204,3.07e-07,167;UBERON:0002106,5.80e-07,3;UBERON:0004854,5.80e-07,3;UBERON:0009034,5.80e-07,3;UBERON:0002095,5.80e-07,3;UBERON:0004782,5.80e-07,3;UBERON:0003281,5.80e-07,3;UBERON:0009664,5.80e-07,3;UBERON:0002296,5.80e-07,3;UBERON:0005602,5.80e-07,3;UBERON:0001179,5.80e-07,3;UBERON:0006293,5.80e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.236132343941038,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0,1.08505435357926,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.929119112685311,0.863077176966451,0.256160706529101,0.945928919554341,1.03423704220986,0,5.41705946377367,0.188242339542605,0,1.12361742222542,0.918251677112708,1.92557416245656,2.55734850319616,0.329851300186716,0.398927315243264,0,0.290209238628584,0.56738522469114,2.4912889959823,0.75374599577023,2.60741459210101,0.65156653411535,0.605399502633369,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.32864840313363,0.981392365535065,0,0.245772908753719,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p12@UBAC2 | |||
}} |
Revision as of 18:26, 11 January 2014
Short description: | p12@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_UBAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473194, uc001voh.2_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.64e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-31 | 42 |
defensive cell | 4.10e-27 | 48 |
phagocyte | 4.10e-27 | 48 |
monopoietic cell | 1.40e-21 | 59 |
monocyte | 1.40e-21 | 59 |
monoblast | 1.40e-21 | 59 |
promonocyte | 1.40e-21 | 59 |
macrophage dendritic cell progenitor | 7.27e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.90e-19 | 66 |
granulocyte monocyte progenitor cell | 5.69e-19 | 67 |
myeloid leukocyte | 1.25e-17 | 72 |
myeloid cell | 2.35e-14 | 108 |
common myeloid progenitor | 2.35e-14 | 108 |
leukocyte | 2.96e-11 | 136 |
nongranular leukocyte | 7.71e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.32e-10 | 120 |
hematopoietic oligopotent progenitor cell | 2.20e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-09 | 161 |
hematopoietic stem cell | 5.88e-09 | 168 |
hematopoietic cell | 1.86e-08 | 177 |
intermediate monocyte | 3.42e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.42e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.23e-19 | 98 |
blood island | 2.23e-19 | 98 |
hemolymphoid system | 1.58e-17 | 108 |
immune system | 8.01e-17 | 93 |
bone marrow | 1.11e-16 | 76 |
bone element | 1.99e-15 | 82 |
skeletal element | 5.17e-14 | 90 |
skeletal system | 1.48e-12 | 100 |
lateral plate mesoderm | 6.06e-09 | 203 |
musculoskeletal system | 3.07e-07 | 167 |
spleen | 5.80e-07 | 3 |
gastrointestinal system mesentery | 5.80e-07 | 3 |
stomach region | 5.80e-07 | 3 |
mesentery | 5.80e-07 | 3 |
gastrointestinal system serosa | 5.80e-07 | 3 |
mesentery of stomach | 5.80e-07 | 3 |
gut mesentery | 5.80e-07 | 3 |
dorsal mesentery | 5.80e-07 | 3 |
dorsal mesogastrium | 5.80e-07 | 3 |
peritoneal cavity | 5.80e-07 | 3 |
spleen primordium | 5.80e-07 | 3 |