FFCP PHASE1:Hg19::chr15:59041768..59041950,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=188 | |||
|TSSclassifier=strong | |||
|UniProt=B4DU28,B5MC71 | |||
|association_with_transcript=0bp_to_ENST00000396140,ENST00000402627,ENST00000461408,ENST00000559053,ENST00000561149,ENST00000561288_5end | |||
|description=CAGE_peak_1_at_ADAM10_5end | |||
|id=chr15:59041768..59041950,- | |||
|ontology_enrichment_celltype=CL:0000766!8.11e-29!76;CL:0002194!1.48e-25!63;CL:0000576!1.48e-25!63;CL:0000040!1.48e-25!63;CL:0000559!1.48e-25!63;CL:0000557!2.61e-24!71;CL:0002009!6.61e-24!65;CL:0000839!5.96e-23!70;CL:0002057!1.63e-22!42;CL:0000860!1.52e-20!45;CL:0000763!2.87e-20!112;CL:0000049!2.87e-20!112;CL:0000048!2.56e-18!430;CL:0000723!2.98e-17!436;CL:0000034!7.34e-16!444;CL:0002320!7.03e-15!365;CL:0000134!9.10e-15!358;CL:0002371!8.47e-14!591;CL:0000144!2.29e-12!625;CL:0000219!2.45e-12!390;CL:0000057!1.48e-09!75;CL:0000548!5.62e-08!679;CL:0000004!5.62e-08!679;CL:0000255!5.62e-08!679;CL:0000012!5.75e-08!682;CL:0000055!5.29e-07!180;CL:0000063!9.59e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-17;39!CL:0000234;1.79e-17;39!CL:0000860;5.19e-17;33!CL:0002057;5.19e-17;33!CL:0000576;5.06e-16;48!CL:0000766;5.57e-14;69!CL:0000763;9.28e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.42e-30,72;CL:0002194,3.32e-27,59;CL:0000576,3.32e-27,59;CL:0000040,3.32e-27,59;CL:0000559,3.32e-27,59;CL:0000473,3.00e-26,48;CL:0000234,3.00e-26,48;CL:0000557,1.08e-25,67;CL:0002009,2.12e-25,61;CL:0000839,2.82e-24,66;CL:0000860,1.63e-22,42;CL:0002057,1.63e-22,42;CL:0000763,5.60e-21,108;CL:0000049,5.60e-21,108;CL:0000048,5.52e-19,427;CL:0000723,6.80e-18,433;CL:0000034,1.80e-16,441;CL:0002320,3.00e-15,361;CL:0000134,3.84e-15,354;CL:0000219,1.18e-12,386;CL:0000057,1.07e-09,76 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-16;42!CL:0000049;2.44e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.28e-22!112;UBERON:0004765!1.11e-21!101;UBERON:0001434!1.11e-21!101;UBERON:0002371!1.60e-21!80;UBERON:0002390!2.06e-21!102;UBERON:0003061!2.06e-21!102;UBERON:0003081!6.05e-21!216;UBERON:0001474!2.91e-20!86;UBERON:0002204!3.58e-20!167;UBERON:0002384!1.98e-15!375;UBERON:0002405!5.01e-15!115;UBERON:0000926!7.90e-13!448;UBERON:0004120!7.90e-13!448;UBERON:0006603!7.90e-13!448;UBERON:0004535!2.76e-07!110;UBERON:0000467!6.48e-07!625;UBERON:0001009!6.56e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.76e-25,315;UBERON:0004120,1.76e-25,315;UBERON:0006603,1.76e-25,315;UBERON:0003081,2.48e-23,203;UBERON:0001434,5.32e-23,100;UBERON:0002371,1.34e-22,76;UBERON:0002193,1.61e-22,108;UBERON:0002390,3.07e-22,98;UBERON:0003061,3.07e-22,98;UBERON:0004765,1.31e-21,90;UBERON:0002204,1.80e-21,167;UBERON:0001474,3.34e-21,82;UBERON:0002405,7.98e-21,93;UBERON:0002384,8.41e-16,371;UBERON:0004535,3.69e-07,109;UBERON:0001009,8.72e-07,112 | |||
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| |||
|short_description=p1@ADAM10 | |||
}} |
Revision as of 23:50, 11 January 2014
Short description: | p1@ADAM10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAM10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396140, ENST00000402627, ENST00000461408, ENST00000559053, ENST00000561149, ENST00000561288_5end |
EntrezGene: | ADAM10 |
HGNC: | 188 |
UniProt: | B4DU28B5MC71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.42e-30 | 72 |
monopoietic cell | 3.32e-27 | 59 |
monocyte | 3.32e-27 | 59 |
monoblast | 3.32e-27 | 59 |
promonocyte | 3.32e-27 | 59 |
defensive cell | 3.00e-26 | 48 |
phagocyte | 3.00e-26 | 48 |
granulocyte monocyte progenitor cell | 1.08e-25 | 67 |
macrophage dendritic cell progenitor | 2.12e-25 | 61 |
myeloid lineage restricted progenitor cell | 2.82e-24 | 66 |
classical monocyte | 1.63e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-22 | 42 |
myeloid cell | 5.60e-21 | 108 |
common myeloid progenitor | 5.60e-21 | 108 |
multi fate stem cell | 5.52e-19 | 427 |
somatic stem cell | 6.80e-18 | 433 |
stem cell | 1.80e-16 | 441 |
connective tissue cell | 3.00e-15 | 361 |
mesenchymal cell | 3.84e-15 | 354 |
motile cell | 1.18e-12 | 386 |
fibroblast | 1.07e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.76e-25 | 315 |
mesoderm-derived structure | 1.76e-25 | 315 |
presumptive mesoderm | 1.76e-25 | 315 |
lateral plate mesoderm | 2.48e-23 | 203 |
skeletal system | 5.32e-23 | 100 |
bone marrow | 1.34e-22 | 76 |
hemolymphoid system | 1.61e-22 | 108 |
hematopoietic system | 3.07e-22 | 98 |
blood island | 3.07e-22 | 98 |
skeletal element | 1.31e-21 | 90 |
musculoskeletal system | 1.80e-21 | 167 |
bone element | 3.34e-21 | 82 |
immune system | 7.98e-21 | 93 |
connective tissue | 8.41e-16 | 371 |
cardiovascular system | 3.69e-07 | 109 |
circulatory system | 8.72e-07 | 112 |