FFCP PHASE1:Hg19::chr17:40714138..40714205,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29932 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDM5 | |||
|association_with_transcript=0bp_to_ENST00000426807_5end | |||
|description=CAGE_peak_1_at_COASY_5end | |||
|id=chr17:40714138..40714205,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.22e-29!254;CL:0000223!3.52e-08!59;CL:0002321!3.76e-08!248;CL:0000220!8.22e-08!246;CL:1000497!6.57e-07!18;CL:0002518!6.57e-07!18;CL:1000449!7.09e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;8.77e-08;15!CL:1000497;9.34e-08;17!CL:0002518;9.34e-08;17!CL:0002681;9.52e-07;12!CL:0002584;9.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.43e-29,253;CL:0000223,1.75e-08,58;CL:0002321,4.25e-08,250;CL:1000449,8.69e-08,15;CL:1000497,9.56e-08,17;CL:0002518,9.56e-08,17;CL:0002681,9.67e-07,12;CL:0002584,9.67e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.78e-07;29 | |||
|ontology_enrichment_disease=DOID:162!6.43e-15!235;DOID:14566!2.30e-14!239;DOID:305!7.67e-14!106;DOID:0050687!5.18e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.43e-15,235;DOID:14566,2.30e-14,239;DOID:305,7.67e-14,106;DOID:0050687,5.18e-13,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.31e-14!169;UBERON:0000925!2.31e-14!169;UBERON:0006595!2.31e-14!169;UBERON:0001041!2.42e-14!98;UBERON:0000466!2.05e-13!126;UBERON:0000077!1.88e-12!130;UBERON:0005177!2.28e-12!107;UBERON:0001007!2.33e-12!155;UBERON:0001555!2.33e-12!155;UBERON:0007026!2.33e-12!155;UBERON:0004921!2.50e-12!129;UBERON:0004185!2.50e-12!129;UBERON:0000064!8.20e-12!219;UBERON:0000481!1.44e-11!347;UBERON:0001048!4.42e-11!168;UBERON:0009569!1.79e-10!113;UBERON:0005172!3.31e-10!55;UBERON:0005173!3.31e-10!55;UBERON:0000475!7.29e-10!365;UBERON:0008947!3.79e-09!38;UBERON:0003258!3.79e-09!38;UBERON:0000477!3.86e-09!286;UBERON:0000119!6.24e-09!312;UBERON:0000464!8.36e-09!104;UBERON:0000063!9.31e-09!97;UBERON:0002417!1.12e-08!61;UBERON:0000916!1.12e-08!61;UBERON:0000483!1.21e-08!309;UBERON:0000072!1.51e-08!46;UBERON:0001004!1.81e-08!72;UBERON:0000065!1.95e-08!53;UBERON:0000058!2.35e-08!26;UBERON:0005911!3.76e-08!82;UBERON:0003104!7.60e-08!238;UBERON:0009142!7.60e-08!238;UBERON:0001737!2.45e-07!9;UBERON:0000080!3.14e-07!18;UBERON:0002120!3.14e-07!18;UBERON:0004875!3.14e-07!18;UBERON:0005721!3.14e-07!18;UBERON:0005754!3.14e-07!18;UBERON:0007297!3.14e-07!18;UBERON:0003887!3.57e-07!21;UBERON:0002365!3.71e-07!31;UBERON:0002330!3.71e-07!31;UBERON:0009497!4.24e-07!25;UBERON:0000015!4.24e-07!25;UBERON:0002423!4.24e-07!25;UBERON:0006235!4.24e-07!25;UBERON:0004161!4.24e-07!25;UBERON:0004111!4.30e-07!241;UBERON:0007499!5.35e-07!25;UBERON:0009856!6.91e-07!26;UBERON:0004211!7.09e-07!16;UBERON:0001285!7.09e-07!16;UBERON:0007684!7.09e-07!16;UBERON:0003220!7.09e-07!16;UBERON:0004208!7.09e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.77e-08;15!UBERON:0004819;8.77e-08;15!UBERON:0001285;8.77e-08;15!UBERON:0007684;8.77e-08;15!UBERON:0000072;1.21e-07;37!UBERON:0001737;2.43e-07;9!UBERON:0001557;2.43e-07;9!UBERON:0005172;3.27e-07;52!UBERON:0005173;3.27e-07;52!UBERON:0002423;4.14e-07;25!UBERON:0000065;5.23e-07;44!UBERON:0006554;5.35e-07;30!UBERON:0001008;5.35e-07;30!UBERON:0002365;5.66e-07;31!UBERON:0002330;5.66e-07;31!UBERON:0001225;9.52e-07;12!UBERON:0008987;9.52e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,7.03e-16,87;UBERON:0004119,2.43e-14,160;UBERON:0000925,2.43e-14,160;UBERON:0006595,2.43e-14,160;UBERON:0005177,1.84e-13,101;UBERON:0004921,2.96e-13,118;UBERON:0001007,1.16e-12,145;UBERON:0001555,1.16e-12,145;UBERON:0007026,1.16e-12,145;UBERON:0001048,4.89e-11,160;UBERON:0005172,9.98e-11,54;UBERON:0005173,9.98e-11,54;UBERON:0009569,1.04e-10,112;UBERON:0011216,3.09e-10,223;UBERON:0008947,3.79e-09,38;UBERON:0003258,3.79e-09,38;UBERON:0002417,4.16e-09,60;UBERON:0000916,4.16e-09,60;UBERON:0000119,1.56e-08,309;UBERON:0000483,2.98e-08,306;UBERON:0005911,3.76e-08,82;UBERON:0000072,4.60e-08,47;UBERON:0000065,5.35e-08,54;UBERON:0004211,8.69e-08,15;UBERON:0009773,8.69e-08,15;UBERON:0001231,8.69e-08,15;UBERON:0001285,8.69e-08,15;UBERON:0007684,8.69e-08,15;UBERON:0004208,8.69e-08,15;UBERON:0001004,1.21e-07,74;UBERON:0006555,1.50e-07,16;UBERON:0004819,1.50e-07,16;UBERON:0001737,2.45e-07,9;UBERON:0002365,3.71e-07,31;UBERON:0002330,3.71e-07,31;UBERON:0009497,4.24e-07,25;UBERON:0000015,4.24e-07,25;UBERON:0002423,4.24e-07,25;UBERON:0006235,4.24e-07,25;UBERON:0004161,4.24e-07,25;UBERON:0007499,5.35e-07,25;UBERON:0004111,6.32e-07,240;UBERON:0009856,6.91e-07,26;UBERON:0001225,9.67e-07,12;UBERON:0008987,9.67e-07,12 | |||
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| |||
|short_description=p1@COASY | |||
}} |
Revision as of 15:28, 20 January 2014
Short description: | p1@COASY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COASY_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000426807_5end |
EntrezGene: | COASY |
HGNC: | 29932 |
UniProt: | E9PDM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.43e-29 | 253 |
endodermal cell | 1.75e-08 | 58 |
embryonic cell | 4.25e-08 | 250 |
epithelial cell of nephron | 8.69e-08 | 15 |
kidney cell | 9.56e-08 | 17 |
kidney epithelial cell | 9.56e-08 | 17 |
kidney cortical cell | 9.67e-07 | 12 |
renal cortical epithelial cell | 9.67e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.43e-15 | 235 |
disease of cellular proliferation | 2.30e-14 | 239 |
carcinoma | 7.67e-14 | 106 |
cell type cancer | 5.18e-13 | 143 |